Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu11g2158 | ATGATGTACAATGATCCGCAGCATCAGCAGCACCAGCAGCACCAGCAGCACCCGTACCAGCAGCAGCCGCCGCATTTCCACCACCAGCCGCCGGGTCAGGAGTTCCACCGCGGACCTCCGCCGTCATCGCAGCCGCCGCCGGTGATGCGGCAAGGCTCCGCTTCGTCGACGAACATCGCCCCCGAGTTTCACCACCCGGGCCCCGGAGGACCCCCACCTCCTCATTACGATGTTCACGGTGATAGTCATGGTGCAAAAAGAATACGAAAACTTACTCAAAGGAAAGCAGTTGATTATACAAGCACAGTCGTGCGCTATATGCAGATTCGTATGTGGCAGCGGGATTCAAGGGATAGGACAGTACTGCAACCTACCCCAGCAGCAGCAATTGATATGTTGCCAGCAGTTGGCTATCCAGACAACCCATCCACGAGCTTTGCTGCTAAATTTGTTCATACATCTCTAAATAAAAATCGTTGCCCCATTAATCGCGTTCTTTGGACTCCAACAGGCCGCCGACTTATTACTGGCTCACAGACTGGGGAATTCACTCTTTGGAATGGACAATCTTTTAATTTTGAAATGATTCTTCAGGCTCATGATCAAGCAATCAGGTCCATGGTCTGGAGTCACAATGACAACTGGATGGTCTCTGGTGACGATGGAGGCGCAATAAAGTATTGGCAGAACAACATGAACAATGTTAAAGCCAACAAATCTGCTCATAAAGAATCAGTCCGTGACTTAAGTTTCTGTAGGACAGATTTGAAGTTTTGTTCATGCTCCGACGATACCACAGTTAAGGTTTGGGATTTTGCACGTTGTCAGGAAGAGTGCTCATTAACTGGCCATGGTTGGGATGTGAAGAGTGTTGACTGGCATCCTACAAAATCCCTATTAGTATCAGGTGGTAAAGACAATCTTGTGAAACTTTGGGACGCCAAAACAGGGAAAGAGCTTTGCTCATTTCATGGGCACAAAAATACTGTGCTATGTGTCAAATGGAATCAAAATGGCAACTGGGTGTTAACAGCTTCAAAGGATCAAATAATAAAGCTTTATGACATAAGAGCCATGAAGGAGCTTGAATCATTCCGTGGACATCGCAAGGATGTTACTGCTTTGGCGTGGCATCCATTCCATGAAGAGTACTTTGTGAGTGGGAGTTATGATGGTTCCATCTTCCATTGGCTTGTCGGGCATGACACTCCCCAAATTGAAATTGCCAATGCTCATGATAATAACGTGTGGGATCTTGCATGGCATCCTATTGGATACCTTCTGTGCAGTGGCAGCAGTGATCATACAACAAAGTTTTGGTGCAGAAATAGACCAGGAGACACTCTTCGTGATAGATTTAACCCTGGCATGCAAGGATATGCTGACCCAAATCCTGTTGCTGGTCGGGTGGGTGGTAATTTTCCAATGGCTGAAGGCCCAACAACTCCAGGACCATTTGCCCCTGGGTTAACTCGAAATGATGGCACCATTCCAGGTGTTGGAGTTGCAATGCCCTTATCTATTCCTTCTCTTGACATGCCTCAAGGAGAGCAGAAGCAGCCCCATCCTGTTTCAATGGGCGCTCCTCCTCTTCCCCCAGGTCCTCATCCCTCTCTTCTTGGTCCCAACCAACAACAACCATACCAACAGAATCCTCAGCAGATGCCGCCACAACATCAACACCAGGGTCTACCACAGCAGATGGGTCCTTTGCCTATGCCTCCTAATATGCCACAATTACAGCACCCTTCCCATTCACCCATGGTCCCTCACCAGCATTTACCTCGCCCTCCTCCCCAAATGCCTATTGGCATGCCAGGATCTATACCAGGGATTTCATCAGTGCCTACATCACATCCGATGCCAATGCCTGGCCCTATGGGGATGCAAATGCCACAAGGTCCTTATGTGGGCATGAATCAAATGCACTCAGGATCCTTGCCTACTAGTGGAGGGCCACCACTTGGTGGTTTTCCAGGCAACATGCCTAATATTCCAGGCCCATCAAATGCCAATTATTCTCAAGGTGCTTCATTTAACAGACCTCAAGGTGGCCAAATGCCTTTGATGCAAGGGTATAATCCTTATCAGTCTGGCAATCAATCTGGGATGCCTCCAAACGTACAACCCTAG | 2133 | 0.4843 | MMYNDPQHQQHQQHQQHPYQQQPPHFHHQPPGQEFHRGPPPSSQPPPVMRQGSASSTNIAPEFHHPGPGGPPPPHYDVHGDSHGAKRIRKLTQRKAVDYTSTVVRYMQIRMWQRDSRDRTVLQPTPAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGKELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSYDGSIFHWLVGHDTPQIEIANAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTLRDRFNPGMQGYADPNPVAGRVGGNFPMAEGPTTPGPFAPGLTRNDGTIPGVGVAMPLSIPSLDMPQGEQKQPHPVSMGAPPLPPGPHPSLLGPNQQQPYQQNPQQMPPQHQHQGLPQQMGPLPMPPNMPQLQHPSHSPMVPHQHLPRPPPQMPIGMPGSIPGISSVPTSHPMPMPGPMGMQMPQGPYVGMNQMHSGSLPTSGGPPLGGFPGNMPNIPGPSNANYSQGASFNRPQGGQMPLMQGYNPYQSGNQSGMPPNVQP* | 711 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu11g2158 | 710 | SUPERFAMILY | WD40 repeat-like | 151 | 440 | IPR036322 | GO:0005515 | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 409 | 440 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | Gene3D | - | 107 | 312 | IPR015943 | GO:0005515 | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 239 | 271 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 281 | 318 | - | - | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 197 | 229 | - | - | |
| Pvu11g2158 | 710 | Gene3D | - | 313 | 450 | IPR015943 | GO:0005515 | |
| Pvu11g2158 | 710 | MobiDBLite | consensus disorder prediction | 541 | 565 | - | - | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 281 | 322 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | PANTHER | WD40 REPEAT PROTEIN | 73 | 707 | IPR045245 | GO:0031124 | |
| Pvu11g2158 | 710 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
| Pvu11g2158 | 710 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Pvu11g2158 | 710 | Pfam | WD domain, G-beta repeat | 240 | 271 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | Pfam | WD domain, G-beta repeat | 411 | 440 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | Pfam | WD domain, G-beta repeat | 195 | 228 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | Pfam | WD domain, G-beta repeat | 317 | 355 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | Pfam | WD domain, G-beta repeat | 361 | 397 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | Pfam | WD domain, G-beta repeat | 279 | 313 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | MobiDBLite | consensus disorder prediction | 525 | 540 | - | - | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 365 | 397 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | SMART | WD40_4 | 402 | 441 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | SMART | WD40_4 | 358 | 398 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | SMART | WD40_4 | 232 | 271 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | SMART | WD40_4 | 316 | 355 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | SMART | WD40_4 | 190 | 229 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | SMART | WD40_4 | 143 | 187 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | SMART | WD40_4 | 274 | 313 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 409 | 440 | - | - | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 155 | 187 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 239 | 271 | - | - | |
| Pvu11g2158 | 710 | MobiDBLite | consensus disorder prediction | 642 | 710 | - | - | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 197 | 229 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | CDD | WD40 | 159 | 440 | - | - | |
| Pvu11g2158 | 710 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 300 | 314 | IPR019775 | - | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 365 | 397 | - | - | |
| Pvu11g2158 | 710 | MobiDBLite | consensus disorder prediction | 494 | 593 | - | - | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 323 | 357 | - | - | |
| Pvu11g2158 | 710 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 323 | 364 | IPR001680 | GO:0005515 | |
| Pvu11g2158 | 710 | PRINTS | G protein beta WD-40 repeat signature | 258 | 272 | IPR020472 | - | |
| Pvu11g2158 | 710 | PRINTS | G protein beta WD-40 repeat signature | 300 | 314 | IPR020472 | - | |
| Pvu11g2158 | 710 | PRINTS | G protein beta WD-40 repeat signature | 428 | 442 | IPR020472 | - | |
| Pvu11g2158 | 710 | MobiDBLite | consensus disorder prediction | 665 | 710 | - | - |