Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2157 ATGGTTTTCATTGGGAGTCATAGGCAATTTATTGATAGTGTGTGCACAGTTGTGATCAAGGGTAACTGGGGCAATCTGTTGAAGGTTAAGAATGCCTCTGCTTTCACTTCTTCTACCATTCACCAGGTACTATTGCAGCTCTCACTCTATGATTCTGGAATTTTTCATTCCTTCCCATTCTTCAAATGGCTCGACTCCATCCCACATTATAGCCATTCCTTGCAATGTTCATGGGCCATGATTCACATCCTCACCGAACATAAGCATTTCAAAACTGCACAAAATATGCTTGAAAAAATTGCGAACAGGGATTTTCTTCCATCACCTTCAGTTTTGAGCACTTTGGTGAGGACTCATGACAACCCAGAAGTTAATTCTCAAGTTTTGAGCTGGCTTGTCATACATTATGCTAAGTCAAAGATGACACATGATGCAATTCAAGTTTTTGAGCAGATGATGTTACATGAAGTCAAACCTCATTTGCATGCTTGCACTGTACTTTTGAATTCGTTGTTGAAGGATGGGGTTACTCACATGGTGTGGAAAATTTACAGGAGAATGGTTAAAGTTGGGGTTGTTCCCAATATGTACATTTACAATTGTTTATTTCATGCCTGTTCAAAAGCAAGAGATGTGGAAAGGGCAGAACAGTTATTAAATGAGTTGGATTTAAAGGGTATGCTACCTGATATCTTCACATATAATACTTTGATATCATTATATTGCAAGAAGGGTATGCACTATGAGGCTTTGTCTATCCAGAGCAGAATGGAAAGAGAGGGGATAAACCTTGATATTGTTAGTTATAACTCTCTTATTTATGGATTTTGCAAAGAAGGCAGGTTGAGAGAAGCTATGAGGATGTTTAGCGAAATAAAAAATGCAACTCCCAATCAGGTGACATATACTACATTGATTGATGGTTACTGTAAAACAAATGAACTGGAGGAAGCTCTGAAAATTCAGGGACTGATGGAGTCTAAGGGATTGTACCCTGGAGTTGTTACTTATAATTCAATTTTGCGTAAGCTGTGTCAAGATGGCAGGATAAAGGATGCTAACAAACTCTTGAGTGAGATGAGTGAAAGGAAAGTTCAAGCTGACAATATCACTTGCAACACACTTATTAATGCATACTGCAAGATTGGAGATATGAAATCTGCTTTGAAATTTAAGAACAAGATGTTAGAATATGGACTAAAACCTGATCCATTTACATACAAGGCGCTGATTCATGGGTTCTGCAAGACAAATGAGTTGGAAAGTGCAAAGGAGGTATTGTTTAGCATGCTTGATGCTGGATTTACACTCAGTTATTGTACATACACATGGATTGTAGATTGCTACTGTAAGAAAGACAATATGGATGCAGTTTTAGCACTGCCAAATGAGTTTATGAGTAGAGGCCTTTGTCTTGATGTTTCAGTGTACAGGGCATTGATAAGAAGGTCATGCAAGTTAGAAAGGGTTGAATGTGCTGAAAAGTTATTCAATCAAATGGAAGGAAAGGGTATATCGGCTGACAGTGTTATCTACACCAGTCTTGCATATGCTTATTGGAAAGCAGGGAATGCAAGTGCTGCCTTGGGTGTTTTAGAAGAGATGACTAGGAGAAGGTTGATGATCACAGTCAAACTGTATAGATGCTTTAGTACTTCTGATGCTAGTGAAAACAAAGTGTCGCTGCTCTTCTGGAATCATGTGGTGGATAGGGGTCTGATGTCAAGAAATTCAATGAATAAAATACAGCAAATGCTGATATGA 1764 0.3838 MVFIGSHRQFIDSVCTVVIKGNWGNLLKVKNASAFTSSTIHQVLLQLSLYDSGIFHSFPFFKWLDSIPHYSHSLQCSWAMIHILTEHKHFKTAQNMLEKIANRDFLPSPSVLSTLVRTHDNPEVNSQVLSWLVIHYAKSKMTHDAIQVFEQMMLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYRRMVKVGVVPNMYIYNCLFHACSKARDVERAEQLLNELDLKGMLPDIFTYNTLISLYCKKGMHYEALSIQSRMEREGINLDIVSYNSLIYGFCKEGRLREAMRMFSEIKNATPNQVTYTTLIDGYCKTNELEEALKIQGLMESKGLYPGVVTYNSILRKLCQDGRIKDANKLLSEMSERKVQADNITCNTLINAYCKIGDMKSALKFKNKMLEYGLKPDPFTYKALIHGFCKTNELESAKEVLFSMLDAGFTLSYCTYTWIVDCYCKKDNMDAVLALPNEFMSRGLCLDVSVYRALIRRSCKLERVECAEKLFNQMEGKGISADSVIYTSLAYAYWKAGNASAALGVLEEMTRRRLMITVKLYRCFSTSDASENKVSLLFWNHVVDRGLMSRNSMNKIQQMLI* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2157 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 508 542 IPR002885 -
Pvu11g2157 587 Gene3D Tetratricopeptide repeat domain 464 581 IPR011990 GO:0005515
Pvu11g2157 587 Gene3D Tetratricopeptide repeat domain 186 320 IPR011990 GO:0005515
Pvu11g2157 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 403 437 IPR002885 -
Pvu11g2157 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 195 229 IPR002885 -
Pvu11g2157 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 298 332 IPR002885 -
Pvu11g2157 587 Pfam Pentacotripeptide-repeat region of PRORP 133 280 IPR033443 -
Pvu11g2157 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 160 194 IPR002885 -
Pvu11g2157 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 125 159 IPR002885 -
Pvu11g2157 587 TIGRFAM PPR: pentatricopeptide repeat domain 476 508 IPR002885 -
Pvu11g2157 587 TIGRFAM PPR: pentatricopeptide repeat domain 370 403 IPR002885 -
Pvu11g2157 587 TIGRFAM PPR: pentatricopeptide repeat domain 163 195 IPR002885 -
Pvu11g2157 587 TIGRFAM PPR: pentatricopeptide repeat domain 267 293 IPR002885 -
Pvu11g2157 587 TIGRFAM PPR: pentatricopeptide repeat domain 405 436 IPR002885 -
Pvu11g2157 587 TIGRFAM PPR: pentatricopeptide repeat domain 300 333 IPR002885 -
Pvu11g2157 587 TIGRFAM PPR: pentatricopeptide repeat domain 232 265 IPR002885 -
Pvu11g2157 587 TIGRFAM PPR: pentatricopeptide repeat domain 335 368 IPR002885 -
Pvu11g2157 587 TIGRFAM PPR: pentatricopeptide repeat domain 197 231 IPR002885 -
Pvu11g2157 587 SUPERFAMILY TPR-like 269 531 IPR011990 GO:0005515
Pvu11g2157 587 Pfam PPR repeat 468 501 IPR002885 -
Pvu11g2157 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 368 402 IPR002885 -
Pvu11g2157 587 Pfam PPR repeat family 368 416 IPR002885 -
Pvu11g2157 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 333 367 IPR002885 -
Pvu11g2157 587 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 6 583 - -
Pvu11g2157 587 Gene3D Tetratricopeptide repeat domain 25 185 IPR011990 GO:0005515
Pvu11g2157 587 Gene3D Tetratricopeptide repeat domain 395 463 IPR011990 GO:0005515
Pvu11g2157 587 Gene3D Tetratricopeptide repeat domain 321 394 IPR011990 GO:0005515
Pvu11g2157 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 230 264 IPR002885 -
Pvu11g2157 587 Pfam Pentatricopeptide repeat domain 292 342 IPR002885 -
Pvu11g2157 587 Pfam PPR repeat 510 539 IPR002885 -
Pvu11g2157 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 473 507 IPR002885 -
Pvu11g2157 587 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 265 295 IPR002885 -
Pvu11g2157 587 PANTHER ATPASE EXPRESSION PROTEIN 3 6 583 - -