Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2156 ATGAGGATTATGTATCTTCTTGATCATGATAGGTTCCCATTTAAAATGTCACACTCTTTGTTCTTCATGCACCACATCTTAATAATCTTCATCTCTATTCCTCTTCTCTGTTCTTTTCTTCATCCTTTTCTCTTCTCAGTTATCATGGCTGTGGTGGCTTTAGAGACTCAGTTCCATGTTTTGGCTGTTGATGACAGTCTCATTGACAGAATGTTGATTGAGAGACTCTTGAAAACCTCTTCCTTCAATGTTACTACAGTTGATTCTGCCACCAAGGCCTTAAAGTTTCTTGGTTTGGTTGAAGATGAGTTGAAGACTTTTGAAACTTCTGTTGCATCAGAAATTCATCAGCAGGATGTTGATGTTAACCTGATTATAACAGATTACTGTATGCCAGGAATGACTGGTTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCACTTAAGAACATACCAGTTGTGATTATGTCCTCAGAGAATGTGCCATCAAGGATCAACAGATGTTTGGAAGAAGGAGCAGAAGAATTCTTTCTGAAACCAGTTCAACAAGCAGATGTAAATAAACTGAAGCCACATTTGATGAAATCAAGAACTAAAGAAGAGCAAGAACAACCACTGATCAATAACAAAAGAAAGGACATGGAAGAAATTTATTCCCCAAACAAAACCAGATTAAGATGCAGCACTTAG 693 0.3694 MRIMYLLDHDRFPFKMSHSLFFMHHILIIFISIPLLCSFLHPFLFSVIMAVVALETQFHVLAVDDSLIDRMLIERLLKTSSFNVTTVDSATKALKFLGLVEDELKTFETSVASEIHQQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQADVNKLKPHLMKSRTKEEQEQPLINNKRKDMEEIYSPNKTRLRCST* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2156 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR 39 227 IPR045279 GO:0009736
Pvu11g2156 230 SUPERFAMILY CheY-like 57 206 IPR011006 -
Pvu11g2156 230 CDD REC_typeA_ARR 60 190 - -
Pvu11g2156 230 ProSiteProfiles Response regulatory domain profile. 59 195 IPR001789 GO:0000160
Pvu11g2156 230 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 39 227 - -
Pvu11g2156 230 SMART REC_2 58 194 IPR001789 GO:0000160
Pvu11g2156 230 Gene3D - 59 226 - -
Pvu11g2156 230 Pfam Response regulator receiver domain 60 187 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2156 Pvu-Chr11 48735976 48738178 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu11g2156 Response_reg 4.8e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2156 11 48735976 48738178 Pvu5g0235 5 2000935 2005462 PCT