Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu11g2154 | ATGGCAGAAACCGCAATTTTCTTCGCCGCCACCGGAGAACCTCCTCTGCTACGATTCTTCAACAGCACCTTTCACTACGTCAAACGCAACGTCGTCGCTCACATTCTGCGCTCCCTAAACGACGCCGTCGCACAAGCCAGGGTTTGCTGTGACGTGGACGCGGCGATCGAGAAACAGTGCGAAGTGTACTCGGGAGATTGCTCGTCGAATGACAGGAGTTTCGGCGCCGACGAGAATGGACGGCACGCCGTTTTCAATGCGCTGGATACTATGCTTAAGGATAGTTTGGAGCGGCTGAAGACGATGAGGGAAAATCTATGTTTGGTAAAGATAGGTCTAACTATGGGATATGCTTGTGAATTCAAGTATGCTGAACATACAGCCACTATTAGGTCTTTGTGCCTGGACAGTAAGTTAGAAGCAGCTCTTTGGCTTTGGAGGAAAATGGTTCTGAAAGGTGTTGTTCCTGATGTGTTTACCCACAACCATATTGTAAATGGGCTGTGCAAAATTGGTTTTCTGGAGAAAGCGGATTGGGTTGTTAGAGAGATGTTAGCATTTGGTCCTCGTCCCAATTGTGCTACTTATAACAGTTTGATTAAGGGCTATTGCACTGTTAATGACATGGATAAGGCTTTGCTTCTGTTCTCCACCATGTCTAATGCTGGGGTTCTGCCAAACAGGGTTACTTGTAATATACTGGTGCGCGCTCTGTGCGAGAAAGGTCTTCTAAAGGGAGCTAAAAGGATGCTCAAAGAAATATTGGAGGATGATGACGAGAAATATATAACTGATTTAGTGACCTCTACTATATTTATGGATAACTACTTCAAGAAAGGAGCAGTTGTTCAGGCTCTCAGTCTTTGGGATCAGATGCTTCAAAATTGTACTAAAGTTGATGTTGTAGCTTATAATGTTCTTATCCATGGATTTTGCAAGAGTCTACAAATGACCCTTGCATATGGATATGCATGTGAGATGTTTAAAAAAGGTTTACTTCCTGATGTTTTTACTTATAATATTCTTATTGGTGCTCTTTGCAAAGAAGGTAAAATAAGTGAGGCTTGCTATACCCTTGGAGTCATGTATAGTATGGGAATTATGCCTGATCAAATTACATACCAGGTTGTGATTCGAGGCCTTTGTTTTGATGGAGAGATTGCTAGAGCAAAAAACTTGCTTTGGTGTATGTTGAACAATTTAATGGTGCCCAAGCCTTTAATATGGAACCTACTGATTGACTTCTACGGACGATGTAATGATCTTAGCAATGCACTTTTTACAAGAGATCAAATGCTAGCTTTTGGTGTTCACCCGAATGTATTTACGTACAATGCTTTAATTCTTGCACAAGTGAAGAGTGATAATTTCTATGGTGCTTGCTCCCTGAAGGAAGAGATGCTTTCAAGAGATATTTTTCCTGATGTTGTTACCTATAATTTATTGATAGGTGCTGCCTGTAATTTAGGACGTCCTGATTTTGCTCTTCAATTACATGATGAGATGGTGCAGAGAGGGTATGACCCAGATTTAATAACTTATACTGAACTTGTTAGGGTGTTCTGTATTAGAGGTAGGATGAAAGAGGCAGAGGAGCTATATGCCAAAATACTAAAATCTGGTTTATTGAATGATCATATTCCAGTGCAGATTCTATTTAACAAGTACTGCAAATTGGAGGAACCAGTTAGAGCATTTAACTTGTATCAAGACTGGTTAGAAAGTAAAAGGGGTAGTCATCCGTATTAA | 1749 | 0.4094 | MAETAIFFAATGEPPLLRFFNSTFHYVKRNVVAHILRSLNDAVAQARVCCDVDAAIEKQCEVYSGDCSSNDRSFGADENGRHAVFNALDTMLKDSLERLKTMRENLCLVKIGLTMGYACEFKYAEHTATIRSLCLDSKLEAALWLWRKMVLKGVVPDVFTHNHIVNGLCKIGFLEKADWVVREMLAFGPRPNCATYNSLIKGYCTVNDMDKALLLFSTMSNAGVLPNRVTCNILVRALCEKGLLKGAKRMLKEILEDDDEKYITDLVTSTIFMDNYFKKGAVVQALSLWDQMLQNCTKVDVVAYNVLIHGFCKSLQMTLAYGYACEMFKKGLLPDVFTYNILIGALCKEGKISEACYTLGVMYSMGIMPDQITYQVVIRGLCFDGEIARAKNLLWCMLNNLMVPKPLIWNLLIDFYGRCNDLSNALFTRDQMLAFGVHPNVFTYNALILAQVKSDNFYGACSLKEEMLSRDIFPDVVTYNLLIGAACNLGRPDFALQLHDEMVQRGYDPDLITYTELVRVFCIRGRMKEAEELYAKILKSGLLNDHIPVQILFNKYCKLEEPVRAFNLYQDWLESKRGSHPY* | 583 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu11g2154 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 227 | 261 | IPR002885 | - | |
| Pvu11g2154 | 582 | Pfam | PPR repeat | 152 | 184 | IPR002885 | - | |
| Pvu11g2154 | 582 | Pfam | PPR repeat | 365 | 394 | IPR002885 | - | |
| Pvu11g2154 | 582 | Pfam | PPR repeat family | 474 | 522 | IPR002885 | - | |
| Pvu11g2154 | 582 | Pfam | PPR repeat family | 300 | 348 | IPR002885 | - | |
| Pvu11g2154 | 582 | Pfam | PPR repeat family | 191 | 239 | IPR002885 | - | |
| Pvu11g2154 | 582 | SUPERFAMILY | TPR-like | 169 | 574 | IPR011990 | GO:0005515 | |
| Pvu11g2154 | 582 | TIGRFAM | PPR: pentatricopeptide repeat domain | 442 | 476 | IPR002885 | - | |
| Pvu11g2154 | 582 | TIGRFAM | PPR: pentatricopeptide repeat domain | 512 | 542 | IPR002885 | - | |
| Pvu11g2154 | 582 | TIGRFAM | PPR: pentatricopeptide repeat domain | 337 | 370 | IPR002885 | - | |
| Pvu11g2154 | 582 | TIGRFAM | PPR: pentatricopeptide repeat domain | 195 | 227 | IPR002885 | - | |
| Pvu11g2154 | 582 | TIGRFAM | PPR: pentatricopeptide repeat domain | 477 | 510 | IPR002885 | - | |
| Pvu11g2154 | 582 | TIGRFAM | PPR: pentatricopeptide repeat domain | 302 | 336 | IPR002885 | - | |
| Pvu11g2154 | 582 | TIGRFAM | PPR: pentatricopeptide repeat domain | 229 | 257 | IPR002885 | - | |
| Pvu11g2154 | 582 | TIGRFAM | PPR: pentatricopeptide repeat domain | 159 | 193 | IPR002885 | - | |
| Pvu11g2154 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 192 | 226 | IPR002885 | - | |
| Pvu11g2154 | 582 | Pfam | PPR repeat | 442 | 472 | IPR002885 | - | |
| Pvu11g2154 | 582 | Pfam | PPR repeat | 267 | 295 | IPR002885 | - | |
| Pvu11g2154 | 582 | Pfam | PPR repeat | 408 | 437 | IPR002885 | - | |
| Pvu11g2154 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 475 | 509 | IPR002885 | - | |
| Pvu11g2154 | 582 | Gene3D | Tetratricopeptide repeat domain | 410 | 581 | IPR011990 | GO:0005515 | |
| Pvu11g2154 | 582 | Gene3D | Tetratricopeptide repeat domain | 83 | 258 | IPR011990 | GO:0005515 | |
| Pvu11g2154 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 300 | 334 | IPR002885 | - | |
| Pvu11g2154 | 582 | PANTHER | PPR CONTAINING PLANT-LIKE PROTEIN | 16 | 576 | - | - | |
| Pvu11g2154 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 157 | 191 | IPR002885 | - | |
| Pvu11g2154 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 510 | 544 | IPR002885 | - | |
| Pvu11g2154 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 335 | 369 | IPR002885 | - | |
| Pvu11g2154 | 582 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL | 16 | 576 | - | - | |
| Pvu11g2154 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 440 | 474 | IPR002885 | - | |
| Pvu11g2154 | 582 | Gene3D | Tetratricopeptide repeat domain | 324 | 400 | IPR011990 | GO:0005515 | |
| Pvu11g2154 | 582 | Gene3D | Tetratricopeptide repeat domain | 259 | 323 | IPR011990 | GO:0005515 | |
| Pvu11g2154 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 405 | 439 | IPR002885 | - |