Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2153 ATGGAAGAGAATCCTCCCTCAAGTGTTTTAGATGGGATGGTTGTTGGAGTCAAATTTGGTATGGCTACACGCCAGGAAATTTGTACGGCATCGATTAGTGACTCTTCAATTAGTCATGCTAGTCAGCTGTCAAATCCCTTCCTTGGGCTACCCCTTGAATTTGGCAGATGTGAATCCTGTGGTACTTCTGAAGCAGGAAAATGTGAAGGTCACTTTGGATATATTGAGCTACCAGTTCCAATATATCATCCTAGTCATATCAGTGAGTTGAAACGGTTGCTGAGCCTCGTCTGTTTAAACTGCTTGAAAATGCGGAAAACCAAGCTTTCAGCGTCAGGCAGTGGTTTGGCACAGAGATTAGTATCTCCTTGTTGTGAGGAGATTAATGCTGCTCAAATTTCTATAAGGGAGGTTAAAACAAGTGACGGGGCTTGTTATCTGGCACTCAAGGTATCCAAATCCAAGATGCATCCTGATTTTTGGGGTTTTTTAGAAAAATATGGCTATCGCTATGAGGGTGATCACACTCGAGCCTTACTTCCTTGCGAGGCAATGGAAATTATTAAGAGAATTCCAATAGAAACCAAAAAAAAGCTTGCTGGAAAAGGGTATTTTCCTCAAGATGGATATGTTTTCAAGCATCTTCCGGTGCCACCTAATTGCTTGTCTGTGCCAGAAGTTTCAGACGGCATCAGTGTCATGTCTTCGGATCCTTCCATGACAATTCTCAGAAAATTGCTCAGGAAGGTTGAAATCATTAAAAGTTCTAGATCTGGAGAACCAAATTTTGAGTCTCATCATGTGGAAGCAAATGATCTGCAGTCAGTGGTTGAGCAGTATTTTCAAATTAGGGGCACTTCTAAGGCAGCACGTGATACAGAAACACGTTTTGGGGTCAATAAAGAGCTTAATGCATCATCAACTAAAGCATGGCTAGAGAAAATGCGGACTTTATTTATAAGAAAAGGTTCCGGTTTTTCCTCCCGGAATGTGATAACCGGAGATTGTTATAAAAGAATAAATGAAGTAGGAATTCCGGTTGAAGTTGCCCAACGAATAACATTTGAGGAGAGAGTTAACATCCATAACATAAGTTATTTGCAGAAATTAGTTGATGAAAATCTGTGCCTGACCTACAAGGAAGGTGTATCAACTTTTTCGCTTAGAGAGGGTTCAAAGGGTCACATATATCTGAAGCCTGGTCAGATAGTGCATCGGAGGATTATGGATGGGGATATCGTCTTCATTAATAGACCCCCTACAACACACAAACACTCTTTACAGGCACTTTTTGTTTATATCCATGACGACCACACTGTGAAAATAAATCCTTTAATTTGTGGACCACTTGGAGCTGATTTTGATGGTGACTGTGTCCATCTGTTTTATCCACAGTCACTTGCTGCCAAAGCAGAAGTTGTGGAGCTATTTTCTGTGGAGAATCAACTGCTCAGTTCTCACAGTGGTAATTTGAATCTACAGTTAAGCACAGATTCGTTGTTGTCACTGAAGATGTTGGTGAAGAGATGTTTTTTTGATAGAGCGGCAGCTAATCAATTGGCGATGTTTCTTTTACCTTTGGGTCGACCTGGTTTGATCAAGGCCAGTTCTGGTGATTCTTATTGGACTTCCATCCAAATGTTACAGTGTGCTCTACCTTTGTGTTTTGATTGCTCTGGGGGACGGTATTTGATTAGGCAGAGTGAAATCTTAGAATTTGATTTCAATAGGGACGTTTTGCCTGCAACAATAAATGAAATAGCAGCCTCAATTTTCTTTAGTAAGGGTCCGAAGGAGGCACTAAAGTTCTTTGATGTATTGCAGCCTTTTTTGACGGAAAGTATATTTGCTGATGGGTTTAGTGTTAGCCTGCAAGATTTTTCAATATCTAGGGCAACCAAAAGAATTATAAGCAGAAGCATAGGAAAAGTGTCTTCTCTGTTGCATCAGCTGAGGTCCATTTACAACGAGCTGGTGGCGCAACAATTGGAGAAGCTTATTCGTGATATTGAGCATCCTGTTATTAATTTTGCTCTAAAGTCAACTAAACTAGGAGATTTAATTGATTCAAAGAGTAAATCTGCAATTGATAAGGTTGTTCAGCAGATTGGTTTCTTAGGGCAGCAACTATTTGACAGGGGAAGATTCTATTCAAAAGGATTGGTAGAAGATGTAGCATCTCATTTTCATGTGAAGTGTTGTTATGACGGGGATGGTTATCCCTCTGCTGAGTATGGATTGCTCAAAGGGTCTTTTTTTAATGGTTTGGATCCATATGAAGAGATGGTGCATTCAATTTCAACAAGGGAAGTAATGGTGCGTTCTTCAAGGGGATTATCTGAACCAGGAACACTCTTCAAGAATTTGATGGCCATTCTGCGAGATGTTGTTATCTGTTATGATGGAACTGTCAGAAATATTTGCAGTAATTCCATTATCCAGTTTGAATATGGATTAGAAAAAACTGAGCACCTATTCCCTGCTGGTGAGCCTGTAGGTGTCTTAGCTGCAACTGCTATGTCAAATCCTGCTTACAAGGCTGTCCTTGATGCTAGTCCCAATAGCAATTCCTCATGGGAGTTGATGAAGGAAATATTACTATGCAAGGTCAATTTTAGGAATGAACCTGTTGATCGGCGTGTTATTTTGTACTTGAATGACTGTGATTGTGGAGGGAATTATTGCCGGGAAAATGCGGCATATAAAGTTAAAGATCAATTGAGAAAAGTCAATCTTAAGGATGCAGCAGTGGAGTTTGTTATTGAATATCAAGAACAGCGAATTCAAAAGGGAAATTCTGAAACTGATGCTGGACTTGTTGGTCATATTTATCTGGACGAGATGATGTTAGAGGAGCTGAAGATCAGCATGGCCCACGTTTTTCAGAAATGCTTGGAAAGACTAAAATCCTTTAGTCCAAGAAAGAAAGCTAATCAATTTTTGAAGAGGACTGAATTATCGTATAGTGAGTCTTGCTCCTCTTCACATCCTGCTGCTCCGTGTTTAACATTCGTTTGGGTTGAGGATCGTAATAATGAATTTGATTACACTGTAAAGATCCTATCTGAAAAAATCTGTCCTGTTCTGTTAGAAACAATAATCCAAGGAGACCCACGCATTAGCTCTGCAAGTATAATTTGGGTTACTCCGGATACAAACACATGGGTCCGAAACCCTTATAAATCTTCCACTGGTGAACTGGCACTGGATATTATTCTTGAGAAGGAAGTAGTCAAACAGAGTGGTGATGCTTGGAGGATTGTACTTGATTCCTGCCTTCCTGTTCTTCATTTGATTGATACCAGGCGTTCAATCCCTTATGCTATTAAGCAAACTCAAGAATTATTGGGGATATCATGCACTTTTGATCAAGCGATTCAGCGTGTTGCAGCATCTGTGAAAATGGTGGCAAAAGGTGTTCTTAGAGAGCATCTAATTTTGTTAGCTAGTAGTATGACATGTGGCGGGAACATGGTTGGGTTTAATACAGGTGGATATAAAGCCCTGTCTCGACAACTAAATATTCAAGTACCATTCACAGATGCGACACTCTTTACACCTAAAAAGTGTTTTGAGCGAGCTGCTGAGAAATGTCATACTGACTCTCTGTCAAGCATTGTTGCATCCTGTTCCTGGGGTAAACCTGTGGCTGTTGGCACAGGATCAAAATTTGATATTGTTTGGGATGCAAATAAGATACGATCAAGTGAAATTGAAGGGATGGATGTTTACAGTTTTCTTCACATGGTTAAAGGCCGCACTGACAGGGAAGAAGAAACTGATGCTTGTTTGGGTGAAGATATTGATGATTTGCTGGAAGAAGAAAATTTGGATTTGGAAATGTCCCCACCACGTAACTCTGGTTTTGAGGCTGTCTTTGAAGAGAATCCTGAGGTACTAAATAATTCAACATCCAATGGTTGGGATGTAAATTCAAGTCAGACCGAATCAAAAACCAATGGTTGGTCTGGTTGGGTAAGTAACAAAGCTGAAACAAATGAAGGAAGATCCGACCGTGCCCAGGAGAGTTCTTGGGGGAAAACTGTCACACAAGAAGACTCTTCTAAGTCTAGTGCTTGGAATACAAATACAACTGGTCATACAAATACTAAATCTAATGAATGGTCTGCCTGGGGAAGTAAAAAGTCTGAAATTCAAGCTGGTGGATCTGAGAAGGTTGAAGGTTCATGGGGCTCGGGTAAAACCAAAGATGTTACCCAAAAAGATAATTTTGGGTCTGGTGCTTGGGGTGCAAACAAAACAGATCAGGCAAAAACAAAATCTAATGAATGGTCTAGCTGGGGAAACAATAATTCTGAAATATTAGCTGGTGGATCTGAAAATATGCAAGACTCTTGGGGCTCTGGTGGGAGGAAAGATGTTACCCAAGAAGGCAATGTGACATCTGGTGCTTGGGGTGCAAACGTAGATCAGACAAAAACACAATCTAATGAATGGTCTGGCTGGGGAAAGAATAAGTCTGAAATACCAGCTGGTGGATCTGAAAATGTGCAGGGTTCTTGGGGATCTGATAAGTGGAAAGATGGTGTTACCCAAGTAGACAACTCTGCATCTGGTTGGGGTGGAAATAGAAGAGATCAGACAAAAGCAAAATCTAATGAATGGTCTGGCCGGGGAAGCAATAAAGCCGAAATACCAGCTGGTGCATCTGAAAATGTGCAAGAAGATTCTTGGGGCTCAGGTAAATTGGGAGATGATGTTACTGAAAAAGACAATTCTGGGTCTGGTGCTTGGGGTGGAAACAGAAGAGATCAGACAAAGACAAAATCTAATGAATGGTCTGGCTGGGGAAGGAATAAATTGGAAATACCTGCTGGTGGTTCTGAAAATGTACAAGAAGATTCTTGGGGCTCAGGTAAATTGAAAGATGATGTTACCCAAAATGATAATTCTGGGTCTGATGCCTGGGGTGCAAACAGCACAGGTCAGACAAAATCAAAATCTAATGAATGGTCTGGCCGGGGGAAGAATAAGTCTGAAATACCAGCTGGTGGATCTGAAAATGTGCAGGATTCTTGGGGCTCTGGTACGAGGAAAGATGTTACCCAAGTAGACACCTCTGTGTCTGGTTCTTGGGGTGGAAGTAGAAAAGATCAAACTAACACAACATCTAATGAATGGGCTGGCTGGGGAAGGAATAAATCGGAAATACCAGCTGGTGGATGTGAAACTGTTCAGGAAGATTCTTGGGGCTCAGGTAAGTTGAAAGATGATGTTACCCAGAAAGACAATTCTGGGTCAGGTGCTTGGGGTGCAAACAAAACAGGTTTGACAAAAACTGAAGTAGATGAGTGGGCAAGAAATAAAGTTGAAACAGCAGACGGTGGGTCGGAAAAGCTCCAAGAGGATTCTTGGAACTCAGGTAATTTGAAATCTGAATCAAAAGTTGGCAATGCCTCTTGGGGAAAACCCAACTCCTCTGGAAGTCAATCATGGGATTCCCATAATCAGTCAAATCAAAATTCAAGTTCTCGGGGATGGGAATCACATATTGCTTCAGCTAATTCAGACAGTGAGAAAGGTTTTCAGTGGGGTAAGCAAGGCAGAGAATCTTTTAAGAAAAATCGCTTTGAAGGTTCACAAGGTCGGGGCTCAAATAGTGGTGACTGGAAAAATAGGAATCGCCCACCTAGAACACCCGGACAGAGATTGGACTTATACTCTTCTGAGGAACAGGATGTGCTGAAGGAGATCGAACCTATTATGCAGTCTATCAGACGAATCATGCAACAACAGGGGTACAACGATGGGGACCCACTGGCTGCTGATGATCAACTTTTCGTACTTGAGAATGTCTTCGAGCACCACCCAGATAAAGACACCAAAATGGGTGCTGGAATTGACTATGTCATGGTTAACAAACACAGCAGTTTTCAGGATAGCAGATGCTTCTATGTTGTTTTGAAAGATGGTCGAAGAGAAGATTTTTCCTACCGGAAATGCTTGGATAACTGGATAAGAAAGAAGTATCCAGAACTTGCCGAATCCTTCTTCGGCAAATATTTTCGGAAACCCCGTAATAGGGCGGAGCAAACTGCAACCCCAAGGGGGGACCAGACTGCAATGCCACCGCGAGACGAAGCGGCTACACCGGCTGACCAGACCTCAACACCCGGCCCTGTGGAAACCAATGAGTAG 6159 0.4163 MEENPPSSVLDGMVVGVKFGMATRQEICTASISDSSISHASQLSNPFLGLPLEFGRCESCGTSEAGKCEGHFGYIELPVPIYHPSHISELKRLLSLVCLNCLKMRKTKLSASGSGLAQRLVSPCCEEINAAQISIREVKTSDGACYLALKVSKSKMHPDFWGFLEKYGYRYEGDHTRALLPCEAMEIIKRIPIETKKKLAGKGYFPQDGYVFKHLPVPPNCLSVPEVSDGISVMSSDPSMTILRKLLRKVEIIKSSRSGEPNFESHHVEANDLQSVVEQYFQIRGTSKAARDTETRFGVNKELNASSTKAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNISYLQKLVDENLCLTYKEGVSTFSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALFVYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVVELFSVENQLLSSHSGNLNLQLSTDSLLSLKMLVKRCFFDRAAANQLAMFLLPLGRPGLIKASSGDSYWTSIQMLQCALPLCFDCSGGRYLIRQSEILEFDFNRDVLPATINEIAASIFFSKGPKEALKFFDVLQPFLTESIFADGFSVSLQDFSISRATKRIISRSIGKVSSLLHQLRSIYNELVAQQLEKLIRDIEHPVINFALKSTKLGDLIDSKSKSAIDKVVQQIGFLGQQLFDRGRFYSKGLVEDVASHFHVKCCYDGDGYPSAEYGLLKGSFFNGLDPYEEMVHSISTREVMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGLEKTEHLFPAGEPVGVLAATAMSNPAYKAVLDASPNSNSSWELMKEILLCKVNFRNEPVDRRVILYLNDCDCGGNYCRENAAYKVKDQLRKVNLKDAAVEFVIEYQEQRIQKGNSETDAGLVGHIYLDEMMLEELKISMAHVFQKCLERLKSFSPRKKANQFLKRTELSYSESCSSSHPAAPCLTFVWVEDRNNEFDYTVKILSEKICPVLLETIIQGDPRISSASIIWVTPDTNTWVRNPYKSSTGELALDIILEKEVVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQTQELLGISCTFDQAIQRVAASVKMVAKGVLREHLILLASSMTCGGNMVGFNTGGYKALSRQLNIQVPFTDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKPVAVGTGSKFDIVWDANKIRSSEIEGMDVYSFLHMVKGRTDREEETDACLGEDIDDLLEEENLDLEMSPPRNSGFEAVFEENPEVLNNSTSNGWDVNSSQTESKTNGWSGWVSNKAETNEGRSDRAQESSWGKTVTQEDSSKSSAWNTNTTGHTNTKSNEWSAWGSKKSEIQAGGSEKVEGSWGSGKTKDVTQKDNFGSGAWGANKTDQAKTKSNEWSSWGNNNSEILAGGSENMQDSWGSGGRKDVTQEGNVTSGAWGANVDQTKTQSNEWSGWGKNKSEIPAGGSENVQGSWGSDKWKDGVTQVDNSASGWGGNRRDQTKAKSNEWSGRGSNKAEIPAGASENVQEDSWGSGKLGDDVTEKDNSGSGAWGGNRRDQTKTKSNEWSGWGRNKLEIPAGGSENVQEDSWGSGKLKDDVTQNDNSGSDAWGANSTGQTKSKSNEWSGRGKNKSEIPAGGSENVQDSWGSGTRKDVTQVDTSVSGSWGGSRKDQTNTTSNEWAGWGRNKSEIPAGGCETVQEDSWGSGKLKDDVTQKDNSGSGAWGANKTGLTKTEVDEWARNKVETADGGSEKLQEDSWNSGNLKSESKVGNASWGKPNSSGSQSWDSHNQSNQNSSSRGWESHIASANSDSEKGFQWGKQGRESFKKNRFEGSQGRGSNSGDWKNRNRPPRTPGQRLDLYSSEEQDVLKEIEPIMQSIRRIMQQQGYNDGDPLAADDQLFVLENVFEHHPDKDTKMGAGIDYVMVNKHSSFQDSRCFYVVLKDGRREDFSYRKCLDNWIRKKYPELAESFFGKYFRKPRNRAEQTATPRGDQTAMPPRDEAATPADQTSTPGPVETNE* 2053
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2153 2052 Pfam RNA polymerase Rpb1, domain 5 755 1168 IPR007081 GO:0003677|GO:0003899|GO:0006351
Pvu11g2153 2052 Gene3D RNA polymerase Rpb1, domain 3 487 621 IPR042102 -
Pvu11g2153 2052 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 197 1378 - -
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 2012 2052 - -
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 1850 1864 - -
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 1786 1849 - -
Pvu11g2153 2052 Gene3D - 795 824 - -
Pvu11g2153 2052 Pfam Protein of unknown function (DUF3223) 1920 1989 - -
Pvu11g2153 2052 Gene3D - 1899 1995 - -
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 1299 1331 - -
Pvu11g2153 2052 Pfam RNA polymerase Rpb1, domain 2 325 478 IPR000722 GO:0003677|GO:0003899|GO:0006351
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 1670 1717 - -
Pvu11g2153 2052 Gene3D - 322 486 - -
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 1618 1657 - -
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 2037 2052 - -
Pvu11g2153 2052 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 14 1231 - -
Pvu11g2153 2052 Pfam RNA polymerase Rpb1, domain 3 482 626 IPR007066 GO:0003677|GO:0003899|GO:0006351
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 1400 1490 - -
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 1299 1895 - -
Pvu11g2153 2052 Gene3D RNA polymerase II, clamp domain 12 119 IPR044893 -
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 1516 1533 - -
Pvu11g2153 2052 Gene3D RNA polymerase ii 354 406 - -
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 1865 1880 - -
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 1767 1785 - -
Pvu11g2153 2052 Pfam RNA polymerase Rpb1, domain 1 43 282 IPR007080 GO:0003677|GO:0003899|GO:0006351
Pvu11g2153 2052 SMART rpolaneu7 208 507 IPR006592 GO:0003677|GO:0003899|GO:0006351
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 1581 1602 - -
Pvu11g2153 2052 MobiDBLite consensus disorder prediction 1342 1380 - -
Pvu11g2153 2052 PANTHER DNA-DIRECTED RNA POLYMERASE 197 1378 IPR045867 GO:0003899|GO:0006351
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu11g2153 Pvu-Chr11 48649292 48666715 Transposed