Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2145 ATGACCATGAAAACCTCACCTATACTTACTCCTTTGGTGCTCTTCCTCCTCTTCTCCCTAGCCAAAGGGCAGAACCCTAAATGTGATGTCCATGACCATGGCTCAACCCTTAAAGTGTTCCATGTGTTCAGCCCTTGCTCCCCTTTTAGGCCCTCACAGGGAATGTCATGGGAGGAGAGTGTCCTACAGCTACAGGCCAAGGATCAGGACAGGATGCAGTACCTGTCCAACTTGGTAGCTAGGAGGTCAATTGTCCCAATTGCCTCAGGCAGAGAAATCACACAGAGCCCTACCTACATTGTCAAGGCCAAGATTGGTACCCCAGCTCAGACCCTTCTCTTGGCCATGGACACCAGCAATGATGCTGCTTGGCTCCCTTGCACTTCCTGTCTTGGTTGCTCAACACTCAAACCCTTTGCCCCTGCCAAATCCACCACTTTCAAGACACTTCCATGCAGTGCTCCACAGTGCAAACAGGTACCGAACCCCACTTGCGGTGGAAGCGCGTGTGCTTTCAACTTCACTTATGGCACTTCCTCTGTGGCAGCTACTCTTGTGAAGGACACAGTTACCCTAGCCACTGACCCAGTTCCGGGCTACACCTTTGGGTGCGTTCAAAAAGCAACAGGGAGCTCAATTCCAACACAGGGGCTATTGGGCCTGGGCCGAGGCCCATTGTCACTCTTGGCCCAAACCCAAAATCTCTACCGATCTACATTCTCCTACTGCTTGCCCAGCTTCAAAACACTCAACTTTAGTGGGTCACTGAGACTTGGGCCTGTGGCCCAGCCCAAGAGGATCAAGTTCACCCCTCTTCTCAAAAACCCTAGAAGGTCATCTCTGTATTATGTGAACTTGGTGGCCGTTAGAGTTGGCCGGAGAATTGTTGATATCCCGCCGGAGGCTTTAGCGTTCAACCCCACCACCGGTGCCGGCACCATTTTTGATTCCGGCACGGTGTTCACCCGGCTGGTTGAACCGGCCTACACCGCCGTCCGGAACGAGTTCCGGCGACGAGTCACCGTCGGCAAGAAACTCACCGTGACAAGGCTAGGAGGGTTCGACACGTGCTACACCGTCCCAATAGTTGCACCAACCATAACGTTTATGTTCTCCGGCATGAACGTAACCCTCCCACCGGACAACACCCTCATCCACAGCACCGCCGGCAGCGTCACGTGCTTGGCCATGGCGGCGGCGCCCGACAACGTGAACTCGGTGCTGAACGTGATCGCCAACATGCAACAACAAAACCACCGTGTCCTCTACGACGTCCCCAACTCAAGACTCGGCGTTGCTCGTGAACTTTGCACCTAA 1317 0.5406 MTMKTSPILTPLVLFLLFSLAKGQNPKCDVHDHGSTLKVFHVFSPCSPFRPSQGMSWEESVLQLQAKDQDRMQYLSNLVARRSIVPIASGREITQSPTYIVKAKIGTPAQTLLLAMDTSNDAAWLPCTSCLGCSTLKPFAPAKSTTFKTLPCSAPQCKQVPNPTCGGSACAFNFTYGTSSVAATLVKDTVTLATDPVPGYTFGCVQKATGSSIPTQGLLGLGRGPLSLLAQTQNLYRSTFSYCLPSFKTLNFSGSLRLGPVAQPKRIKFTPLLKNPRRSSLYYVNLVAVRVGRRIVDIPPEALAFNPTTGAGTIFDSGTVFTRLVEPAYTAVRNEFRRRVTVGKKLTVTRLGGFDTCYTVPIVAPTITFMFSGMNVTLPPDNTLIHSTAGSVTCLAMAAAPDNVNSVLNVIANMQQQNHRVLYDVPNSRLGVARELCT* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2145 438 Gene3D Acid Proteases 260 438 IPR021109 -
Pvu11g2145 438 PANTHER ASPARTYL PROTEASE AED3-LIKE 13 438 - -
Pvu11g2145 438 PANTHER ASPARTYL PROTEASES 13 438 IPR001461 GO:0004190|GO:0006508
Pvu11g2145 438 Pfam Xylanase inhibitor C-terminal 282 431 IPR032799 -
Pvu11g2145 438 Pfam Xylanase inhibitor N-terminal 99 259 IPR032861 -
Pvu11g2145 438 SUPERFAMILY Acid proteases 97 437 IPR021109 -
Pvu11g2145 438 Gene3D Acid Proteases 77 259 IPR021109 -
Pvu11g2145 438 ProSiteProfiles Peptidase family A1 domain profile. 99 433 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2145 Pvu-Chr11 48532211 48535691 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2145 11 48532211 48535691 Pvu11g2145 11 48532211 48535691 ECH