Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2114 ATGGCATTAGAACTTATTGGTGGTGCTCTTCTCTCTTCTTTCCTTCAGGTTGCATTCCAGAAGCTTGCTTCTCCTCAAATTCTCGATTTCTTTTATGCAAGAGAGCTTGATCAGAAGCTGCTCAACAAGTTGGAAATCAAGCTGCACTCCATCCATTCTCTGGCTGATAATGCAGAGCGAAAGCAGTTCATGGATCTTCATGTCAGAAACTGGCTGCTTAAGGTCAAAGATGCTGTCCTTGATGCAGAGGATCTCTTGGATGATATACAAATGCTCTCCAAAAGACAAGATGTTGAATCTGAATCTCAAACCTGTTCAGGCTGTACTTGCAAGGTACTCAATTTCTTCAAATCTTCTCCTATTACTATTAATTCCCTTAACAAGGAAATTGAATGTAAGATGGAACAAATCCTTGACGACTTAGAATTTCTCTCAAGCCAAAGGGGTGATCTAGGATTGAAAAAAGCTAGCGGTGTTGGATCTGGGTTGAGTAATGAACTGCCACAGAAATCACAAACAACATCGTTGGTTGTTGGAACTGATATCTATGGCAGAGATGATGATAAAAGACTGATCATTGACTGGCTGACTTCTGACATCAACAATGGTAACCAACCATCAATACTTTCTGTTGTGGGAATGGGTGGAGTGGGTAAGACTACTCTTGCTCAACATGTATTCAATGACCCAAAGGTGGATGAGGCTAAATTTGTTGTCAAAGCCTGGGTTTGTGTTTCAGATGAGTTTGATGTTTTCAGGATATCAAGAGCAATTCTTGAGGCTGTTACTAAATCAACTGACGATAGTAGAGATATGCAGATGGTTCACACAAGATTGAAGGATGAATTGACAGGGAAGAAATTTCTTCTTGTTTTGGATGACGTTTGGAACGAAAACCAACCTAAATGGGAGGAAGTGCGGAAGCCCCTTGTTTTAGGGGCCCAAGGGAGTAAGATTCTTGTCACCACACGTAGCAAGGAAGTTTCTTCTACCATGTGGTCAGAAGAATACTCCCTACAGCAATTACAAGGAGATTATTGCTGGAAGTTGTTTGCTAAACATGCATTTCGAGATGATGATACTCAACTAAATCCAGAGTGCAAGGACATTGGCCTGAAGATTGTTAAAAAATGTCAAGGACTACCTCTCGCCTTGAAAACAATGGGAAGTATGTTATACAACAAATCATCTGTTTCAGAATGGCAAATTGTGTTCCAAAGCGAAATATGGGAATTTTCAAAAGAGCGTTGTGATATTATTCCCGCTTTAGCATTGAGTTATATCCACCTTCCTTCACATTTGAAGGTATGCTTTGCGTATTGTGCCCTATTCCCCAAGGATTATAAATTTGAAAAGGATTATTTGATTCAGTTGTGGATGACTGAAAATTTCGCCCACTGTCGTCAACATAGTAGGACTCCAGAAGAAGTTTGCCAACAATACTTCAATGATCTACTATCAAGGTCCTTCTTTCAACCAACAGTATATAAAGAAGAATTTATCATGCATGACCTTCTACATGATTTGGCAAAATATGTCGATGGAGGACTATACTTTAGCTGCAAAGTTGATCAAACAGAAAAGATACAGAAAGTAACTCGTCATTTATCAGTTGAACTTGGTCGATTTAAATATTTTGATGGGTTTGGAACTTTATGTAATACAAAAAGGTTACGTACATTTATGCCAAAACCTATGCGGTATGGTTTAGGGGGTTTGAGTATGAAAATGTCGATACATGAATTGTTGTTCAAGTTTAAGTTCTTACGTAACTTATCTCTGTCTTGTTGTTCTGACCTTCGAGAGTTACCTGACTCTATTGGAAATCTTGAGTATCTCCGTTCCTTAAACCTCTCCTATACTAAAATAGAAAGACTAAATGAAAAGATATGTTTACTCTCCCACTTGCAAATACTGATGTTGAACTATTGTTTATATTTGACGGAGCTACCCTCTAATTTGCATTTACTCACAAATTTGTGTCGTCTTGAATTTATAAGGACGAAAGTGAGAAAGATTCCACCGAATTTGGGAAAAGGGAAGAATCTAAAAGTAGTAATGAATTTCTTTGATGTTGACCATGGCAGGGAATTGGGTGTTCAACAGCTAGGAGAGCTCAACCTTGAGGGACAACTATCAATTCGGGACCTACATAATATTTCGAATTCTGTGGATGCATTAGAAGCAAATTTGAAGAATAAAACACTCCTTGTGGCACTGACCTTAGAATGGGGTTGGGATTGCAACTCTATTGATTTAAAAAAAGAAGAGGACGTAATTGAGAATTTGCAACCTTCCAAAAACTTAAAGAAGTTGTCAATATGTAGGTATGGTGGGAAACGATTTCCAAATTGGTTACTAGAAAATTCATTGTGGAATATGGTGTACTTAAAGTTGGATGGATGTGAATCTTGCGAACGTTTACCTCCCCTTGGACTTTTGCCATTTCTCAAGGTCTTGGTGATTACAAAACTTCATGGGATAGTGAGTATTGATGCTGATTTTCATGGAAACAACTCTTGTTCATTTAAATCCCTTGAAACATTGGACATCTCCTTGATGAGTCAATGGGAAAAGTGGGACTGCCAAGCTGTGAGGGGTGCTTTTCCAAGTCTACGAAAGTTTTCCATAACAAATTGTCCGAAGCTGAAAGGACAGCTGCCAGAGCAACTTATTCCTTTGGAAACACTATATATTGAAAACTGCCAAGAACTTGAGGTTTCCGCTCCTAGGGCTCTAGATATACAACTACGTCAATGTGGAAAGCTGCAGTTAGAGTCATGTGGTACAATGAAAAGGCTCACACTGTGGAAAACATCATTGCTGGAAATTGTTGGGTCGTCCGACACTCTTGAAATTTTGCACATTTATCCCCTTGATGGTTGTGTCTTCCTACGAAGCTTTCCACTGGATTTGTTCCCAACACTCAAGACGCTTCATCTCAGTGGGTTTGATAATCTAGAGATGATTTCACAGAGTCTAGTCCATAATCATCTAGAATTTCTAGAACTCAAGTGTTGTCCTAAATTAGAATCATTACCTGGAAGCATGCATATGCTGCTTCCATCCCTGAGGAGCTTATGGATAGAAGACTGCCCAAGACTTGAAGGAGATTTCCCACCAAATCTAGAAGCGCTGACAATAGTAGACTGTCCAAGACTTGAGTCGTTTCCTGACGGAGGTTTCCCATCAAATCTGAAGCATCTGAGAATCAATAATTTCTCTAGATTTGTTGGCTCACTGAAAGGAGCTTTCACAGACAGCTCTTCTTTGGAAAGCTTGTGGACTCAAGAAGTGGATGCAAAATGTTTTCCAGATGAAGGTTTGCTTCCACTCTCTCTTACTTCTCTAACCATCTCTCATTGTCCAAATTTAGAAAAACTGGACTACAAGGGTCTCCATCAACTCTCATCCCTTCAGACTTTGTATCTTACGAACTGCCACAATCTCCAACGCTTACCGGAGGAGGGTCTTCCCAAATCAATTTCAAGTCTTCGTATTTGTGATTGTCCTTTGCTGCAACCGCGTTGCCAAAGAGAAAGAGGCGAAGACTGGGAAAAGATTGCACACATTGAAAAA 3579 0.3954 MALELIGGALLSSFLQVAFQKLASPQILDFFYARELDQKLLNKLEIKLHSIHSLADNAERKQFMDLHVRNWLLKVKDAVLDAEDLLDDIQMLSKRQDVESESQTCSGCTCKVLNFFKSSPITINSLNKEIECKMEQILDDLEFLSSQRGDLGLKKASGVGSGLSNELPQKSQTTSLVVGTDIYGRDDDKRLIIDWLTSDINNGNQPSILSVVGMGGVGKTTLAQHVFNDPKVDEAKFVVKAWVCVSDEFDVFRISRAILEAVTKSTDDSRDMQMVHTRLKDELTGKKFLLVLDDVWNENQPKWEEVRKPLVLGAQGSKILVTTRSKEVSSTMWSEEYSLQQLQGDYCWKLFAKHAFRDDDTQLNPECKDIGLKIVKKCQGLPLALKTMGSMLYNKSSVSEWQIVFQSEIWEFSKERCDIIPALALSYIHLPSHLKVCFAYCALFPKDYKFEKDYLIQLWMTENFAHCRQHSRTPEEVCQQYFNDLLSRSFFQPTVYKEEFIMHDLLHDLAKYVDGGLYFSCKVDQTEKIQKVTRHLSVELGRFKYFDGFGTLCNTKRLRTFMPKPMRYGLGGLSMKMSIHELLFKFKFLRNLSLSCCSDLRELPDSIGNLEYLRSLNLSYTKIERLNEKICLLSHLQILMLNYCLYLTELPSNLHLLTNLCRLEFIRTKVRKIPPNLGKGKNLKVVMNFFDVDHGRELGVQQLGELNLEGQLSIRDLHNISNSVDALEANLKNKTLLVALTLEWGWDCNSIDLKKEEDVIENLQPSKNLKKLSICRYGGKRFPNWLLENSLWNMVYLKLDGCESCERLPPLGLLPFLKVLVITKLHGIVSIDADFHGNNSCSFKSLETLDISLMSQWEKWDCQAVRGAFPSLRKFSITNCPKLKGQLPEQLIPLETLYIENCQELEVSAPRALDIQLRQCGKLQLESCGTMKRLTLWKTSLLEIVGSSDTLEILHIYPLDGCVFLRSFPLDLFPTLKTLHLSGFDNLEMISQSLVHNHLEFLELKCCPKLESLPGSMHMLLPSLRSLWIEDCPRLEGDFPPNLEALTIVDCPRLESFPDGGFPSNLKHLRINNFSRFVGSLKGAFTDSSSLESLWTQEVDAKCFPDEGLLPLSLTSLTISHCPNLEKLDYKGLHQLSSLQTLYLTNCHNLQRLPEEGLPKSISSLRICDCPLLQPRCQRERGEDWEKIAHIEK 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2114 1193 SUPERFAMILY L domain-like 928 1189 - -
Pvu11g2114 1193 Pfam NB-ARC domain 187 406 IPR002182 GO:0043531
Pvu11g2114 1193 PANTHER DISEASE RESISTANCE PROTEIN RP 13 893 IPR044974 GO:0006952
Pvu11g2114 1193 Coils Coil 41 61 - -
Pvu11g2114 1193 Gene3D - 341 425 IPR042197 -
Pvu11g2114 1193 Gene3D - 426 512 IPR036388 -
Pvu11g2114 1193 PRINTS Disease resistance protein signature 208 223 - -
Pvu11g2114 1193 PRINTS Disease resistance protein signature 282 296 - -
Pvu11g2114 1193 PRINTS Disease resistance protein signature 378 392 - -
Pvu11g2114 1193 PRINTS Disease resistance protein signature 584 600 - -
Pvu11g2114 1193 Pfam Rx N-terminal domain 11 103 IPR041118 -
Pvu11g2114 1193 Coils Coil 127 147 - -
Pvu11g2114 1193 Gene3D - 166 338 IPR027417 -
Pvu11g2114 1193 Gene3D - 19 122 - -
Pvu11g2114 1193 PANTHER OS05G0414200 PROTEIN 13 893 - -
Pvu11g2114 1193 Gene3D Ribonuclease Inhibitor 911 1042 IPR032675 -
Pvu11g2114 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 441 IPR027417 -
Pvu11g2114 1193 SUPERFAMILY L domain-like 502 909 - -
Pvu11g2114 1193 Gene3D Ribonuclease Inhibitor 1043 1181 IPR032675 -
Pvu11g2114 1193 Gene3D Ribonuclease Inhibitor 562 687 IPR032675 -
Pvu11g2114 1193 Gene3D Ribonuclease Inhibitor 696 893 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2114 Pvu-Chr11 48147647 48151255 Dispersed/Wgd