Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2113 ATGGCTGCTGAATTCATTACCAATGTTCTTGTCTCCACCTTCCTTGAGACCACTATTGACAATTTGGCTTCTCGTTTTGGAGACATATTTCGTGGAAAAAAAGCCAACAAGAAGCAGTTAAGCATCTTGAAGCTGAAGCTCCTAGCAGTTGATGTTGTGGCTGATGATGCAGAACAGAAACAGTTCACAGATCCACGTGTCAGAGATTGGCTTCTCGCAGCCAAGGGCTACGTGTTTGATCCAGAGGATCTCTTGGATGAAATAGATAATGCACTCACCAAAAGCCAAGTGGAAGCTCAGTCTCAAAATGCTGCTAAAAAGGTACTGAATTCCCTCAAATCTACTTTTGTCAGTTTCTTTAAAGAAAATGAAATTGAATCAAGGATGGAACAAGTCATTGAGGACTTAGAAGATCTTGCAACCCGCAGTCATGTTCTAGGTTTGAAAAGGGCTGATGATGTTGGGGTGAGAACCGGTAGTAGATTATCATCAACATATTTGCCAAACGAAAGTGATATCTATGGCAGAGAAGATGACAAACAATTTGTCCTTAACTGGCTCAAATCTAACACTCAAAACAACCTATCTATACTTTGTATTGTGGGAATGGGAGGGGTGGATGAATTTGATGTTTTCAAGGTATCAAGAGCAATTCTTGAGCATGTTACTACATCTATTGATGACAGTAGAGATATAGAGATCGTTCACAGAAGATTGAAAGAAAAATTGACAGGAAAAAAGTTTCTTCTTATTTTGGATGATGTTTGGAACAAAAATCAATTTAAATGGGAAGAAGTGCAGAAGCCCCTTGTTTTTGGAGCCCAAGGGAGTAGGATTCTTGTGACTACGCGTAGTAAGAATGTTGCTTCTACCATGCGGTCAGACGAACACTCCCTAGAGCAATTACAACAAGATCATTGCTGGAAGTTGTTTGCTAAACACGCATTCCGAGATGATAATACTCAACCAAATCAAGAGTGCAGGGAGATTGGCATGAAGATTGTTAAAAAATGTAAAGGACTACCTCTCGCCTTGAAAACAATGGGAAGTATGTTACACAACAAATCATCTGTTTCAGAATGGAAAACTGTGTTCCAAAGCGAAATATGGGAATTTTCAAAAGAGCATTGTGATATTATTCCCGCTTTAGCATTGAGCTATATCCACCTTCCTTCCCATATGAAGATATGTTTTGTTTATTGTGCCCTATTCCCCAAGGATTATATGTTTAAAAAGGAGGATTTGATTCAGTTGTGGATGACTGAAAATTTTGCCCACTTTTGTCAACATAGTAGGACTCCAGAAGAAGTTTGCGAACAATACTTCAATGATCTACTATCAAGGTCCTTCTTCCAAAATAAAAAAGTATTTGACATGCAACAATACATCAAAGATTTACATTACAGATCCTTCTCCCAAAATTCACATAAAACTAAAGAAGTATTTGTCATGCATGACCTTCTACATGATTTGGCAAAATATGTCGGTGGAGGCCTATACTTCAGGTGTGAGCTTGATCAAACAAAAAAGATACAAAAAGTAGCTCGTTATTTTTCATTTGATCTTGGTGACAAACAATATTTTGATGGGTTTGGAACTTTATGTAATACAGAAAGCTTACGTACATTTGTGCCAAAAACTAGGAGCCTAAATTATTCCTGGAGGTGGGGTATCAAAATGTCAATACATGAATTGTTCTCCAAGTTTAAGTTCTTACATATCTTATCTTTGTCTCATTGTTCTAACCTTCAAGAGTTACCTGACCCTATTGGCAATCTTGAGTATCTCCGTTCCTTAGACCTCTCCCATACGGTAATAAAAAGACTGAATGAAAATATATGTTTACTCTCCCACTTGCAAATACTGAAGTTAAACTTTTGTCGACATTTGGAAGAATTGCCCTCAAATTTGCATTTACTCACCAATCTGTGTCGGCTTGAAATTATAGAGACTGAACTGAGAAAGGTGCCACCGCATTTGGGAAAACTGAAGAATCTTAAAGTAGTAGTGAATTCTTTTACTTTTAATGTTGGTCGTGGCAGGGAGTTGGGTATTCAACAACTAGGAGAGCTTAACCTTGATGGAAGTCTATCAATTCTAGAACTGCAGAATATTGAGAATTCCCTGGATGCATTAAAAGCAGATTTCAAGAATAAAACACAGCTTGTGGCGTTGATGTTGGTATGGGGGTTCATTCGAAACTCTATTGATTCGAAAAAAGAAGAGGAGGTAATTGAGAATTTGCAACCTTCCAAAAACTTAAAGAAGTTGTCAATAGTTAACTATGGTGGGAAACGATTTCCAAATTGGTTACTGAAAATTTCATTGTGGAATATGGTGTCCTTAGTGTTGGACAAATGTATATCTTGCCAAGGTTTACCTCCCCTTGGACTTTTGCCATTTCTCAAGGTGTTGAGGGTTACAAGACTTGATGGGATAGTTAGTATTGATTCTGATTTTCATGGTAACAACTCTTCTTCATTTAAATCCCTTGAAACATTGAACTTCTCCTTTATGAGTCAATGGGAAACATGGGAATGCCAAGCTGTGACAAGTGCTTTTCCACGTCTACAACATCTTTCCATAAAAAATTGTCCGAAGCTGAAAGGACAACTGCCAAAACAACTTATTCCTTTGGAAACACTACAAATTGAATACTGCCAACAACTTGAGGCTTCCGCTCCTAGGGCTTTAGAATTACAAATACGTCATTGTGGAAAGCTGCAGTTAGAGTGGGGTACAATGAAAAGGCTCACAATGAAAACATCATTGCTGGAAATTGTTGGGTCGTCCAACACTCTTGAAAACTTGCAGATTGATTCACCCTTGGAGTCAATCAATGATAATTGTGTCTCTCTAGGAAGCTTTCCACTGGATTTGTTCCCAACACTCAGGACGCTTGATCTCAGTGGGTTTGGTAATCTAGAGATGATTTCACAGAGTCTCATCCATAATCATCTAGAAGAGGTAACACTAAACGATTGTCTGAAATTTGAATCATTTCCTGGAAGCATGCATATGCTGCTTCCATCTCTGAGGAGCTTATGCATACAAGGTTGTTCAAGACTTGAGTCATTCCCTGAGGGAGGTCTCCCATCAAATCTAGAAAAGCTGACAATACAAGACTGTCGTAGAATTGAGTCATTGCCTAATGAAGGTTTCCCATCAAGTCTCCAGACTCTGAGAATACAAGGTTGTTCAGTACTTGAGTCATTCCCTAACAGAGATTTCCCATCAAATCTAGAAGGGCTGACAATACAAGACTGTCCAAGACTTGAGTCATTCCCTAACAGAGGTTTCCCATCAAATCTCCAAAATCTGACAATACAAGGATGTTCAGTACTTGAGTCATTCCCAGAGGGAGGTTTCCCATCAAATCTAGAAGAGATGACAATAAAAGACTGTCCAAGAATTGAGTCGTTCCCTGATGGAGGTTTCCCATCAAATCTAAAAGAGTTGGCAATACAAGACTGTCCAAGACTTGCGTCGTTCCCTGACAGAGGTTTTCCATCAAATCTCCAAACTCTCACAATACAAGGTTGTTCAGTACTTGAGTCATTCCCTGACGGAGGTTTCCCATCAAATCTAGAAGAGCTGACAATACAAGACTGTCCAAGACTTGAATCGTTCCCTGACAAAGGTTTCCCATCAAATCTTCAGACGCTAACAATACAAAGATGTTCAGTACTTGAGTCATTCCCTGACAAAGGTTTCCCATCAAATCTAGAAAAGTTGACAATAAAAGACTGTCCAAGAATTGAGTCATTCCCTGACAAAGATTTCCCATCAAATCTCCAGACTCTGAGAATACAAGGTTGTTCAGTACTTCAGTCGTTCCCTGACAGAGGTTTCCCATCAAATCTCAAGCTTCTGCAAATCAGTAATTGCTCTAGACTTGTTGGCTCACTGAAAGGAGCTTCCAAAGACAACTCTTTGAAAACCTTGTGGATTGGAGAAGTAGATGCAGAATGTTTTCCACATGAAGATTTGCTTCCACTCTCTCTTACTTCTCTAACCATCTCTGATTGTCCAAATCTAGAAAAACTGGACTACAAGGGTCTTCATCAACTCTCATCCCTTCAGAATTTGTATATTAAGAACTGCCCCAATCTCCAACGCTTACCGGAGGAGGGTCTTCCCAAATCAATTTCATATCTTGATATTCGTGATTGTCCTTTGCTGCAACGGCGTTGCTGGCGTGAAAGAGGCGAAGACTGGGAGAAGATTGCGCACATTCAAACACGGTATATATTGAAATGA 4260 0.3918 MAAEFITNVLVSTFLETTIDNLASRFGDIFRGKKANKKQLSILKLKLLAVDVVADDAEQKQFTDPRVRDWLLAAKGYVFDPEDLLDEIDNALTKSQVEAQSQNAAKKVLNSLKSTFVSFFKENEIESRMEQVIEDLEDLATRSHVLGLKRADDVGVRTGSRLSSTYLPNESDIYGREDDKQFVLNWLKSNTQNNLSILCIVGMGGVDEFDVFKVSRAILEHVTTSIDDSRDIEIVHRRLKEKLTGKKFLLILDDVWNKNQFKWEEVQKPLVFGAQGSRILVTTRSKNVASTMRSDEHSLEQLQQDHCWKLFAKHAFRDDNTQPNQECREIGMKIVKKCKGLPLALKTMGSMLHNKSSVSEWKTVFQSEIWEFSKEHCDIIPALALSYIHLPSHMKICFVYCALFPKDYMFKKEDLIQLWMTENFAHFCQHSRTPEEVCEQYFNDLLSRSFFQNKKVFDMQQYIKDLHYRSFSQNSHKTKEVFVMHDLLHDLAKYVGGGLYFRCELDQTKKIQKVARYFSFDLGDKQYFDGFGTLCNTESLRTFVPKTRSLNYSWRWGIKMSIHELFSKFKFLHILSLSHCSNLQELPDPIGNLEYLRSLDLSHTVIKRLNENICLLSHLQILKLNFCRHLEELPSNLHLLTNLCRLEIIETELRKVPPHLGKLKNLKVVVNSFTFNVGRGRELGIQQLGELNLDGSLSILELQNIENSLDALKADFKNKTQLVALMLVWGFIRNSIDSKKEEEVIENLQPSKNLKKLSIVNYGGKRFPNWLLKISLWNMVSLVLDKCISCQGLPPLGLLPFLKVLRVTRLDGIVSIDSDFHGNNSSSFKSLETLNFSFMSQWETWECQAVTSAFPRLQHLSIKNCPKLKGQLPKQLIPLETLQIEYCQQLEASAPRALELQIRHCGKLQLEWGTMKRLTMKTSLLEIVGSSNTLENLQIDSPLESINDNCVSLGSFPLDLFPTLRTLDLSGFGNLEMISQSLIHNHLEEVTLNDCLKFESFPGSMHMLLPSLRSLCIQGCSRLESFPEGGLPSNLEKLTIQDCRRIESLPNEGFPSSLQTLRIQGCSVLESFPNRDFPSNLEGLTIQDCPRLESFPNRGFPSNLQNLTIQGCSVLESFPEGGFPSNLEEMTIKDCPRIESFPDGGFPSNLKELAIQDCPRLASFPDRGFPSNLQTLTIQGCSVLESFPDGGFPSNLEELTIQDCPRLESFPDKGFPSNLQTLTIQRCSVLESFPDKGFPSNLEKLTIKDCPRIESFPDKDFPSNLQTLRIQGCSVLQSFPDRGFPSNLKLLQISNCSRLVGSLKGASKDNSLKTLWIGEVDAECFPHEDLLPLSLTSLTISDCPNLEKLDYKGLHQLSSLQNLYIKNCPNLQRLPEEGLPKSISYLDIRDCPLLQRRCWRERGEDWEKIAHIQTRYILK* 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2113 1419 Gene3D Ribonuclease Inhibitor 536 912 IPR032675 -
Pvu11g2113 1419 Pfam NB-ARC domain 208 387 IPR002182 GO:0043531
Pvu11g2113 1419 Coils Coil 122 142 - -
Pvu11g2113 1419 Gene3D - 302 385 IPR042197 -
Pvu11g2113 1419 PANTHER OS05G0414200 PROTEIN 23 455 - -
Pvu11g2113 1419 PANTHER OS05G0414200 PROTEIN 460 1002 - -
Pvu11g2113 1419 PRINTS Disease resistance protein signature 197 212 - -
Pvu11g2113 1419 PRINTS Disease resistance protein signature 338 352 - -
Pvu11g2113 1419 PRINTS Disease resistance protein signature 567 583 - -
Pvu11g2113 1419 SUPERFAMILY L domain-like 937 1251 - -
Pvu11g2113 1419 Pfam Rx N-terminal domain 15 102 IPR041118 -
Pvu11g2113 1419 Gene3D Ribonuclease Inhibitor 936 1136 IPR032675 -
Pvu11g2113 1419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 401 IPR027417 -
Pvu11g2113 1419 Gene3D - 207 301 IPR027417 -
Pvu11g2113 1419 SUPERFAMILY L domain-like 1148 1412 - -
Pvu11g2113 1419 Gene3D Ribonuclease Inhibitor 1170 1417 IPR032675 -
Pvu11g2113 1419 Gene3D - 15 137 - -
Pvu11g2113 1419 PANTHER DISEASE RESISTANCE PROTEIN RP 23 455 IPR044974 GO:0006952
Pvu11g2113 1419 PANTHER DISEASE RESISTANCE PROTEIN RP 460 1002 IPR044974 GO:0006952
Pvu11g2113 1419 SUPERFAMILY L domain-like 483 891 - -
Pvu11g2113 1419 Coils Coil 702 722 - -
Pvu11g2113 1419 Gene3D - 386 494 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2113 Pvu-Chr11 48110125 48114606 Dispersed/Wgd