Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2109 AGTGCACACATCTGGAATGAAAGTGAAAAAACTATGAAGATTGTAGCTATGGTATTGAGTTGGAATCTTCTCTATGGTGTTTTGCTGCTTATGCTATCAGTACCAATCTGCATTGAAGGTTCAGTTTCAATTTTTTCCACTGATGATTTTAGGAGTACATCTCTCAACAGAAGCAGTTTTCCAAAAGGTTTTATATTTGGGGCAGGATCATCTTCTTATCAGTGTGAAGGTGCAGCAAATGTTGGTGGCAAAGGACCAAGCATATGGGATACATACACTCATAATCACCCAGATAAAATACTGGACAGAAGTAATGGAGAAGTTAGCATTGATCAATACCATCGTTATAAGGAAGATGTTGAAAACATTAAGGAAATGAACATGGATGCTTTCAGATTTTCAATCTCTTGGCCTAGAATACTTCCAAAAGGAAAGGTTAGCGGAGGTGTGAACAAGGAAGGAATCAACTATTACAACAACCTCATTAATGAACTGTTAGCTAAAGGTCTTAAACCCTTTGTGACCCTTTTTCATTGGGATCTTCCTCAAGCCTTAGAAGACGAATATGATGGTTTTTTAAGTCCTAATATAGTGGATGATTTTAAAGATTATGCAGAACTTTGTTTTAAAGAATTTGGAGACAGGGTAAAACATTGGACTACATTAAATGAACCATGGACCTATAGTAAATTTGGGTATGCTGATGCTTTTTTCCCACCTGGAAGATGTTCAACCTGGCAAAACTTATCTTGTACTGCTGGTGATTCAGCCACTGAACCCTACATAGTGAGTCACAATCAATTACTTGCTCATGCAGCTGCTGTCAATGTCTATAAGACAAAATATCAGGGTTTGATAGGGATATCACTGTCCTGTGATTGGATAGTACCACTCTATGATACAGAGTTGGATCAGTTTGCTGCAGAAAGAGCCCTTGATTTTATATTTGGATGCTTTATGGAGCCATTGACAATTGGAGAATACCCTAAATCCATGCAATCTTTGGTAGGGAGTCGATTACCAAAGTTTTCTGCTGATGAGGTCAAACTTGTAAGAGGGTCCTTTGATTTTATTGGAATAAACTACTATACTTCTAATTATGCTACTGATGCACCTGAGTTAAGTGAAGCAAGGCCTAGCTTCCTCACAGATTCTCTTGTTATTCTTACAAGTGAGCGTAATGGAACACCTATTTGTAAAGTGAGTTCAAAATTGTTGTATGTTTGTCCGAAAGGAATTCATGATCTGTTGCTGTATATCAAAACGAAGTACAACAACCCTTTGATCTACATCACTGAAAATGGTATAGATGAATTCAATGATCAAACTCTATCACTTGAAGAAGCCTTAGCAGATACTTCAAGAATTGATTACTTTCATGATCATCTCTATTATCTTCAAAGCGCAATCGAGAATGGCGTGAATGTGAAAGGATATTTTGCATGGTCTTTAACTGACAGCTTCGGATGGAGTTTAGGGTACACTTCAAGGTTTGGAATAATCTTTGTAGATTACCATAATCTCAAAAGATATCCAAAGTTATCTGCCATTTGGTTTAGAGATTTCCTACAAGGCAAAATAGATACATATGACAATTAA 1599 0.3684 SAHIWNESEKTMKIVAMVLSWNLLYGVLLLMLSVPICIEGSVSIFSTDDFRSTSLNRSSFPKGFIFGAGSSSYQCEGAANVGGKGPSIWDTYTHNHPDKILDRSNGEVSIDQYHRYKEDVENIKEMNMDAFRFSISWPRILPKGKVSGGVNKEGINYYNNLINELLAKGLKPFVTLFHWDLPQALEDEYDGFLSPNIVDDFKDYAELCFKEFGDRVKHWTTLNEPWTYSKFGYADAFFPPGRCSTWQNLSCTAGDSATEPYIVSHNQLLAHAAAVNVYKTKYQGLIGISLSCDWIVPLYDTELDQFAAERALDFIFGCFMEPLTIGEYPKSMQSLVGSRLPKFSADEVKLVRGSFDFIGINYYTSNYATDAPELSEARPSFLTDSLVILTSERNGTPICKVSSKLLYVCPKGIHDLLLYIKTKYNNPLIYITENGIDEFNDQTLSLEEALADTSRIDYFHDHLYYLQSAIENGVNVKGYFAWSLTDSFGWSLGYTSRFGIIFVDYHNLKRYPKLSAIWFRDFLQGKIDTYDN* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2109 532 Gene3D Glycosidases 42 530 - -
Pvu11g2109 532 PRINTS Glycosyl hydrolase family 1 signature 354 368 IPR001360 GO:0004553|GO:0005975
Pvu11g2109 532 PRINTS Glycosyl hydrolase family 1 signature 429 437 IPR001360 GO:0004553|GO:0005975
Pvu11g2109 532 PRINTS Glycosyl hydrolase family 1 signature 452 463 IPR001360 GO:0004553|GO:0005975
Pvu11g2109 532 PRINTS Glycosyl hydrolase family 1 signature 473 490 IPR001360 GO:0004553|GO:0005975
Pvu11g2109 532 PRINTS Glycosyl hydrolase family 1 signature 497 509 IPR001360 GO:0004553|GO:0005975
Pvu11g2109 532 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 64 78 IPR033132 -
Pvu11g2109 532 Pfam Glycosyl hydrolase family 1 58 524 IPR001360 GO:0004553|GO:0005975
Pvu11g2109 532 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 27 528 - -
Pvu11g2109 532 SUPERFAMILY (Trans)glycosidases 52 524 IPR017853 -
Pvu11g2109 532 PANTHER GLYCOSYL HYDROLASE 27 528 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2109 Pvu-Chr11 48078224 48082408 Dispersed/Proximal