Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2107 ATGGCTGCTGAGTTCATTACCAATGCTCTTGTCTCCACCTTCGTTGAGACCACCATTGACAATTTGGCTTCTCGTTTTGGGGACATATTTCGTGGAAAAAAAGCCAACAAGAAGCAGCTAAGCATTTTGAAGGTGAAGCTCCTAGCAGTTGAGGTTGTGGCTGATGATGCAGAACAGAAACAGTTCACAGATCCACGTGTAAGAGATTGGCTTCTCGCAGCCAAGGGCGTGGTGTTTGATGCAGAGGATCTCTTGGATGAAATAGATTTTGCACTCTCCAAAAGCCAAGTGGAAGCTCAGTCTCAGAGTGCTGCTAAAAAGGTACTGAATTCCCTCAAATCTTCTTTTGTCAGTTTCTTTAAAGAAAATGAAATTGAAACAAGGATGGAACAAGTCATTGAGGACTTAGAAGATCTTGCAACCCGCAGCCATGTTCTAGGTTTGAAAAAGGCTGATGATGTCGGGATCAGATCCGGTAGTAGATTATCATCAACATATTTGCCAAACGAAAGTGATATCTATGGCAGAGAAGATGACAAACAATTTATCTTTAACTGGCTCACATCTAACACTGACAACAACCTATCTATACTTTCTATTGTGGGAATGGGAGGGGTGGGTAAGACCACTCTTGCCCAACATGTATTCAATGACCCAAGGATGGATGAGGTTAAATTTGATGTCAAAGCTTGGGTTTGTGTTTCGGATGAATTTGATGTTTTCAAGGTATCAAAAGAAATTCTTGAGCATGTTACTAAACCTACTGATGATGACACTAGAGATCTGGAGATGGTTCATAGAAGAACGAAAAAAGAATTGACGGGGAAGAAATTTCTTCTTGTTTTAGATGACATTTGGAACGAAAACCAACTTAAATGGGAGGAAGTTCGAAAACCCCTTCTTTTCGGAGTCCAAGGGAGTAGGATTCTTGTGACTACACGTAGTAAGGAAGTTGCTTCTACCATGCAGTCAGAGGAACACTCCCTAGAGCAATTACAAGAAAATGATTGTTGGAAGTTGTTTGCTAAACATGCATTTCCAGATGATGATACTCAACCAAATCAAGAGTGCAGAGAAATTGGCATGAAGATTGTTAAAAAATGTAAAGGACTACCTCTCGCCTTAAAAACAATGGGAAGCATGTTATATAACAAATCATCTGTTTCAGAATGGCAAACTGTGTTCCAAAGTGAAATATGGGAATTTTCAAAAGAGAGTTGTGATATTGTTCCCGCTTTAGCATTGAGCTATTTTCACCTTCCTTCCCATCTCAAGGTATGTTTTGCTTACTGTGCCCTATTCCCCAAGGATTATGAGTTTAAAAAGGAGGATTTGATTCAGTTGTGGATGACTGAGAATCATTGTCGTCAACATAGGACTCCAGAAGAAGTTTGCCAACAATACTTCAATGATCTACTATCAAGGTCCTTCTTCCAACAACCAGATGGAAATAGAGAAGTATTTGTCATGCATTACCTTCTACATGATTTGGCAAAATATGTCGGTGGAGGCCTATACTTCATGTGCGAACTTGATCAAATAGAAAATGTACAGAAAGTAACTCGTCATTTTTCAGTTGAACTTGGATACGATCAATATTTTGATGGGTTTGGAACTTTTTGTAATACAGAAAGGTTACGCACATTTATTCCAAACGATAGGAGGAGACTGCACCATTTTTACCGAAGGTGGGGTATCAAAATGTCGATACATGAATTGTTGTCCAAGTTTAAGTTCTTACGTATCTTATCTCTTTCTTATTGTTCTGACCTTCAAGAGTTACCTGACTCTGTTGGCAATCTTAAGCATCTACGTTCCATAGACCTCTCCCATACTGCAATAAAAAGAATAACTGAAAAAATATGTTTATTCTCCCACTTGCAAATACTGAAGTTGAACAACTGTACACATTTGGAGGAGTTGCCCTCAAATTTGCATTTACTCACCAATTTGTTACGGCTTGAATTTATACACACTAAAGTGAGAAAGGTGCCACCGCATTTGGGAAATTTGATGAATCTAAAAGTAGTAATGAATTCTTTTGATGTTGGTCATGGCAAGGAGTTGGGTATTAAAAATATACAAGAGCTTAACCTTGAGGGAAGTCTATTAATTGGGGACCTAAAGAATATTTCGAATTCCGTGGATGCATTAGAAGCGGATTTGAAGAATAAATCACACCTTGTGAAGCTCACCTTAGAATGGGGGTGGAATCGAAACTCTATTGATTCAAAAAAAGAAGAGGACGTAATTGAGAATTTGCAACCTTCCAAAACCTTAAAGGAGTTGTCAATCCGTAGGTATGGTGGGAAACGATTTCCAAATTGGTTACTAGATAATTCGCTGTGGAATATGGTGCGCTTAGTGTTGGTGGGATGTAAATCTTGCGAACATTTACCTCCCCTTGGACTGTTGCCATTTCTCAAGGTCTTGAATATTACATATCTTAATGGGATAGTTAGTATTGATGCTGATTTTTATGGTAACAACTCTTCTTCATTTAAATCCCTTGAAACATTGGAGTTCTCCTATATGTGGCAATGGGAAAAGTGGGACTGTCAAGCTGTGACAGGTGCTTTTCCACGTCTGCGAAGGCTTTCCATAACACATTGTTACAAGTTTAAAGAACAGCTGCCAGAGCAAGTTGTTTCGTTGGAAAGACTAAAAATTGAATACTGCCAAGAACTTGAGGCTTCAGCTCCTAGGGCTCTACATTTAGAACTAGGTAATTGTGGAAAGTTGCAGTTGGAGTGGGCTACAATGAAAAGGCTCACAATGAAAGAATCACCATTGCTGGAAATTGTTAGGTCCAACACTCTTGAAGACTTGCAAATTGATTCACCCGTGGAGTCAATCAATGATGATTGTGTCTCTCTACTCACCTTTCAAATGGATTTGTTCCCAACACTCAGGACGCTTCATCTTAGTGGGTTTGGTAATCTACAAATGATTTCACAGAGTCTTATCCATGATCATCTAGAAGAGCTAACACTCAAGAATTGTCGTAAATTACAATCATTGCTTGGAAGCATGCAAATGCTACTTCCATCTCTCAGGAAGTTATGGATACAAGACTGTCCAAAAATTGAGTCATTCCCTGAGGGAGGTTTTCCACCAAATCTCGAGACTCTGACAATACAAGGTTGTTCAGTACTTGAGTCATTCCCCGACCCCGACAAAGGTTTCCCATCAAATCTCCATACTTTAAAAATAAAAGGTTGTCCAAGACTTAAGTCGTTTCCTCACAGAGTTTTCCCATCAAATCTTAAGAACCTGACAATCGAAAATTGTTCTAGACTTCTTGGTTCACTGGAAGGAGTTTTCACACACAGTTATTCTTTGGAAACCTTGTGGATTGGAAACCTAGATACAAAATGTTTTCCAGTTGAAAGTTTGCTTCCACTCTCTCTTACTTCTCTAACCATCTTTGATTGTCCAAATCTAGAAAAACTGGACTACAAGAGTCTCCACCAACTCTCATCCCTTAAGATGTTGAATCTTTCCCATTGCCTCAACCTCCAATGCTTACCTGAGGAGGGTCTTCCAAAATCAATTTCATATCTTAGTATTAGTGCTTGTCCTTTGCTGGAACCGCGTTGCCAGAAAGAAAGAGGCGAAGACTGGAAAAAGATTGCGCACATTAAGAATATATTGCTTCGATGA 3663 0.3923 MAAEFITNALVSTFVETTIDNLASRFGDIFRGKKANKKQLSILKVKLLAVEVVADDAEQKQFTDPRVRDWLLAAKGVVFDAEDLLDEIDFALSKSQVEAQSQSAAKKVLNSLKSSFVSFFKENEIETRMEQVIEDLEDLATRSHVLGLKKADDVGIRSGSRLSSTYLPNESDIYGREDDKQFIFNWLTSNTDNNLSILSIVGMGGVGKTTLAQHVFNDPRMDEVKFDVKAWVCVSDEFDVFKVSKEILEHVTKPTDDDTRDLEMVHRRTKKELTGKKFLLVLDDIWNENQLKWEEVRKPLLFGVQGSRILVTTRSKEVASTMQSEEHSLEQLQENDCWKLFAKHAFPDDDTQPNQECREIGMKIVKKCKGLPLALKTMGSMLYNKSSVSEWQTVFQSEIWEFSKESCDIVPALALSYFHLPSHLKVCFAYCALFPKDYEFKKEDLIQLWMTENHCRQHRTPEEVCQQYFNDLLSRSFFQQPDGNREVFVMHYLLHDLAKYVGGGLYFMCELDQIENVQKVTRHFSVELGYDQYFDGFGTFCNTERLRTFIPNDRRRLHHFYRRWGIKMSIHELLSKFKFLRILSLSYCSDLQELPDSVGNLKHLRSIDLSHTAIKRITEKICLFSHLQILKLNNCTHLEELPSNLHLLTNLLRLEFIHTKVRKVPPHLGNLMNLKVVMNSFDVGHGKELGIKNIQELNLEGSLLIGDLKNISNSVDALEADLKNKSHLVKLTLEWGWNRNSIDSKKEEDVIENLQPSKTLKELSIRRYGGKRFPNWLLDNSLWNMVRLVLVGCKSCEHLPPLGLLPFLKVLNITYLNGIVSIDADFYGNNSSSFKSLETLEFSYMWQWEKWDCQAVTGAFPRLRRLSITHCYKFKEQLPEQVVSLERLKIEYCQELEASAPRALHLELGNCGKLQLEWATMKRLTMKESPLLEIVRSNTLEDLQIDSPVESINDDCVSLLTFQMDLFPTLRTLHLSGFGNLQMISQSLIHDHLEELTLKNCRKLQSLLGSMQMLLPSLRKLWIQDCPKIESFPEGGFPPNLETLTIQGCSVLESFPDPDKGFPSNLHTLKIKGCPRLKSFPHRVFPSNLKNLTIENCSRLLGSLEGVFTHSYSLETLWIGNLDTKCFPVESLLPLSLTSLTIFDCPNLEKLDYKSLHQLSSLKMLNLSHCLNLQCLPEEGLPKSISYLSISACPLLEPRCQKERGEDWKKIAHIKNILLR* 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2107 1220 SUPERFAMILY L domain-like 965 1212 - -
Pvu11g2107 1220 Gene3D Ribonuclease Inhibitor 1073 1201 IPR032675 -
Pvu11g2107 1220 Pfam NB-ARC domain 177 396 IPR002182 GO:0043531
Pvu11g2107 1220 Gene3D - 416 500 IPR036388 -
Pvu11g2107 1220 PANTHER OS05G0414200 PROTEIN 23 877 - -
Pvu11g2107 1220 Coils Coil 122 142 - -
Pvu11g2107 1220 Coils Coil 315 335 - -
Pvu11g2107 1220 Gene3D - 15 137 - -
Pvu11g2107 1220 Gene3D - 157 331 IPR027417 -
Pvu11g2107 1220 CDD AAA 174 313 - -
Pvu11g2107 1220 PRINTS Disease resistance protein signature 197 212 - -
Pvu11g2107 1220 PRINTS Disease resistance protein signature 272 286 - -
Pvu11g2107 1220 PRINTS Disease resistance protein signature 368 382 - -
Pvu11g2107 1220 PRINTS Disease resistance protein signature 575 591 - -
Pvu11g2107 1220 Gene3D Ribonuclease Inhibitor 538 905 IPR032675 -
Pvu11g2107 1220 Gene3D Ribonuclease Inhibitor 906 1059 IPR032675 -
Pvu11g2107 1220 PANTHER DISEASE RESISTANCE PROTEIN RP 23 877 IPR044974 GO:0006952
Pvu11g2107 1220 Coils Coil 708 728 - -
Pvu11g2107 1220 Gene3D - 332 415 IPR042197 -
Pvu11g2107 1220 SUPERFAMILY L domain-like 490 901 - -
Pvu11g2107 1220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 431 IPR027417 -
Pvu11g2107 1220 Pfam Rx N-terminal domain 14 102 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2107 Pvu-Chr11 48056178 48059840 Dispersed/Wgd