Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2106 ATGAGTTGCATAGTTCATATACTGTTTTTCCCTTCTGAAACAGTCTTCACAGCAGCGGAGACTTCATCCCTTGCACAATCACAGTCCCTCAGTTACAGACAGACCTTAGTTTCCCCACGTGGAATATTTGAACTCGGTTTCTTCAACCTTGGGAATCCCAACAAAATCTACCTCGGAATCTGGTACAAGAATATCTCTCTACAAAACATAGTATGGGTTGCAAACAGTGCCATCCCAACCAAGGACTCTTCTGCCATCTTGAAACTAAACAGTTCTGGCAATTTGGTCTTCACACAAAACAACTCGGTTATTTGGTGCACAGGTTCTGAAGAAAAGGCACAGAATCCAGTGGTAGAACTCTTGGACTCTGGAAATCTTGTGATAAGAGATGAGAATGAAGCAAAGGCAGAGGCATATCTGTGGCAAAGCTTTGATCATCCATCTAATACATTGCTGCCAGGAATGAAGCTTGGATGGGACCTCAAAAGAAATCTTAGTGTTTTCCTGACAGCTTGGAAAAATGATGATGATCCGATACCTGGAGACTTATCTTGGGGCATTGTTCTGCATCCTTATGCTGAGATGTATATGATGAAGGGACCAAAAAATGGAAGGCCACTTAACACCATTCACCGTTATGAGTTTGTCTCCAACCAGGAAGAGGTTTATTTCAGATGGAGCCCCGAACAAACTAGTTTAGTAACAAAAGTGGTACTGAACCAAACTGCACAAGGGCGTCAACTTTATGTATGGTCAGAGAAATCATGGATTTGGTATACAACAATGCCAGATGACCACTGTGATAGTTATGGAGTTTGTGGAGCAAATACTTATTGCACCACTTCTGCATCAGCAATGTGTGATTGCTTAAAAGGGTTCAAGCCTAAGTCTCCTGAGAAATGGAACTCAATGGAATGGTCCCAAGGATGTGTCCCCGAACATCCAATTAGCTGCAAAGACAAGTTGGGTGATGATTTTTTCTTCATGGATGGCTTGAAAGTGCCGGATACTGAATATACGTTTGTGGATGAGACTATTGATTTAAAACAATGCAGAACCATGTGCTTGAGTAATTGTTCATGCATGACATATACCAATTCAAATATAAGTGGAGCAGGCAGTGGCTGTGTCATGTGGTTTGGTGATTTATTTGACATCAAACTGTATTCAAATCCAGAAATGGGGCAGCGCCTATATATAAGGTTGAATCCTTCAAAATTAGAGTCTATCAGGCACAAGAACTCTACAATGGTATTTGTAATCTCCATTGCTGCAACTATTGGAGTGATGCTCTCTGTTTATTTTGTCTACAGAAGGAACACTACAGATAAGTCAAAGACAAAAGAGAACATTGAAAGGAAGCTACATGTTCTGGATGTGACTTTGTTTGATCTTTTATCAATCACAACCGCCACTAACAATTTCTCATTGAATAATAAGATTGGACAAGGTGGTTTTGGACCTGTATATAAGGGAAAATTAGTGGGTGATCGAGAAATTGCTGTCAAGAGACTTTCAAGTAGCTCAGGACAAGGAATAACTGAGTTCATGACAGAAGTGAATGTGATTGCAAAGCTTCAACACCGAAATCTTGTAAAGCTCCTTGGTTGTTGCTTTCAAGGACAAGAAAAGTTACTAGTATATGAATACATGGTTAATGGCAGCCTAGACACCTTTCTTTTTGATAAAATAAAAGCTAAATTGCTGGAATGGCCCCAACGTCTGCACATAATATTTGGGATTGCCAGGGGCCTTTTGTATCTACATCAAGATTCCCAGTTGAGGATTATTCATAGAGATCTCAAAGCAAGTAATATTTTACTTGACCAAAAGTTAAATCCAAAAATATCAGATTTTGGAATGGCCAAGGCTTTTGGAGGAGACCAAATAGAAGGAAACACAAATAAAGTTGTTGGGACTGAGTATGATTTTTTTAATCTAAATTTTTCAGCTGATGGACTATATTCAATCAAATCAGACGTTTTCAGCTTTGGTATTTTGTTGTTGGAGATTATATGTGGCAACAAAAATAGAGCTCTTTGTCATGGAAACCAAACTCTGAACCTTGTTGGTTATGCATGGACACTTTGGAAAGAGCAAAATGTTTCACAGTTGATTGACTCAAGCATAAAAGACTCGTGTGTTGTCTCAGAAGTACTGCGATGCACCCATGTTAGTCTCTTGTGCGTGCAACAATACCCGGATGATAGGCCAACCATGAGCTCGGTTATTCAAATGTTAGGGAGTGAGATGGAACTGGTTGAGCCAAAAGAGCCTGGTTTCTTTCCAACAAGAAGGATTTCGAACCAAGGAAAATTGAGCTCAAATCTAAACCAAAAGACTTCAAATACTGAATTAACCATTACCTCATTAAATGGCAGGTGA 2385 0.3958 MSCIVHILFFPSETVFTAAETSSLAQSQSLSYRQTLVSPRGIFELGFFNLGNPNKIYLGIWYKNISLQNIVWVANSAIPTKDSSAILKLNSSGNLVFTQNNSVIWCTGSEEKAQNPVVELLDSGNLVIRDENEAKAEAYLWQSFDHPSNTLLPGMKLGWDLKRNLSVFLTAWKNDDDPIPGDLSWGIVLHPYAEMYMMKGPKNGRPLNTIHRYEFVSNQEEVYFRWSPEQTSLVTKVVLNQTAQGRQLYVWSEKSWIWYTTMPDDHCDSYGVCGANTYCTTSASAMCDCLKGFKPKSPEKWNSMEWSQGCVPEHPISCKDKLGDDFFFMDGLKVPDTEYTFVDETIDLKQCRTMCLSNCSCMTYTNSNISGAGSGCVMWFGDLFDIKLYSNPEMGQRLYIRLNPSKLESIRHKNSTMVFVISIAATIGVMLSVYFVYRRNTTDKSKTKENIERKLHVLDVTLFDLLSITTATNNFSLNNKIGQGGFGPVYKGKLVGDREIAVKRLSSSSGQGITEFMTEVNVIAKLQHRNLVKLLGCCFQGQEKLLVYEYMVNGSLDTFLFDKIKAKLLEWPQRLHIIFGIARGLLYLHQDSQLRIIHRDLKASNILLDQKLNPKISDFGMAKAFGGDQIEGNTNKVVGTEYDFFNLNFSADGLYSIKSDVFSFGILLLEIICGNKNRALCHGNQTLNLVGYAWTLWKEQNVSQLIDSSIKDSCVVSEVLRCTHVSLLCVQQYPDDRPTMSSVIQMLGSEMELVEPKEPGFFPTRRISNQGKLSSNLNQKTSNTELTITSLNGR* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2106 794 SMART blect_4 27 147 IPR001480 -
Pvu11g2106 794 ProSiteProfiles Bulb-type lectin domain profile. 21 141 IPR001480 -
Pvu11g2106 794 SMART ntp_6 321 402 IPR003609 -
Pvu11g2106 794 Gene3D Transferase(Phosphotransferase) domain 1 551 757 - -
Pvu11g2106 794 Pfam PAN-like domain 320 386 IPR003609 -
Pvu11g2106 794 Pfam Protein tyrosine and serine/threonine kinase 476 747 IPR001245 GO:0004672|GO:0006468
Pvu11g2106 794 PIRSF SRK 1 794 IPR024171 GO:0004674
Pvu11g2106 794 Gene3D - 15 145 IPR036426 -
Pvu11g2106 794 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 31 793 - -
Pvu11g2106 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 178 IPR036426 -
Pvu11g2106 794 ProSiteProfiles PAN/Apple domain profile. 318 403 IPR003609 -
Pvu11g2106 794 Pfam D-mannose binding lectin 70 173 IPR001480 -
Pvu11g2106 794 CDD PAN_AP_plant 314 402 - -
Pvu11g2106 794 Gene3D Phosphorylase Kinase; domain 1 436 550 - -
Pvu11g2106 794 Pfam S-locus glycoprotein domain 209 297 IPR000858 GO:0048544
Pvu11g2106 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Pvu11g2106 794 CDD B_lectin 34 147 IPR001480 -
Pvu11g2106 794 SMART serkin_6 475 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g2106 794 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 793 - -
Pvu11g2106 794 ProSiteProfiles Protein kinase domain profile. 475 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g2106 794 SUPERFAMILY Protein kinase-like (PK-like) 451 747 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2106 Pvu-Chr11 48034211 48038514 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g2106 PK_Tyr_Ser-Thr 1.6e-47 CL0016