Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2101 ATGAAAGTGAGTATGAAGATTGCAGCTATGGCATTCAATTTGCATCTTCTCTCTGGTGTTTTGCTGCTTATGATATCAGTACCAATCTGCATTGAAGGTTCAATTTCAATTTTTTCCACTGATGATTTTAGGAGTACATCTCTCAACAGGAGCAGTTTTCCCAAAGATTTTATATTTGGAGCAGCATCATCTGCTTATCAGTGTGAAGGTGCAGCAAATGTGGGTGGCAGAGGACCAAGCATATGGGATACATACACTCATAATCGCCCAGATAAAATACTGGACAGAAGTAATGGAGATGTTAGCATTGATCAGTACCATCGTTATAAGGAAGATGTTGAAAACATCAAGGAAATGAACATGGATGCTTACAGATTCTCAATCTCTTGGTCCAGAATACTTCCAAAAGGAAAGGTTAGTGGAGGTGTGAACAAGGAAGGAATCAACTATTACAACAACCTCATCAATGAACTGTTAGCTAAAGGTCTTAAACCCTTTGTGACCATTTTTCATTGGGACCTTCCTCAAGCCTTAGAAGACGAATATGATGGTTTTTTAAGTCCTAATATAGTGAATGATTTTCAAGATTATGCAGAACTTTGTTTTAAAGAATTTGGAGACAGGGTAAAACATTGGATTACATTAAATGAACCATGGACCTTTAGTAAATATGGGTATGCTGATGCTATTTCACCACCTGGAAGATGTTCAGCCTGGCAAAACTTATCTTGTACTACTGGTGATTCAGCCACTGAACCCTACATAGTGAGTCACAATCAATTACTTGCTCATGCAGCTTCTGTCAATGTCTACAAGACAAAATATCAGGTGTCTCAAAAGGGTGTGATAGGGATATCACTGTCATGTCATTGGATAGTACCACTCTATGATACTGAGTCCGATCAGTTTGCTGCAGAAAGAGCCCTTGATTTTATGTTTGGATGGTTTATGGAGCCATTGACAATTGGAGAATACCCTAAATCCATGCAATCTTTGGTAGGGAGTCGATTGCCAAAGTTTTCTGCTGATGAGATCAAACTTGTAAGAGGGTCCTTTGATTTTATTGGAATAAACTACTATACTTCTTATTATGCTTCTGATACACCTGAGTTAAGTGAAGCAAGGCCTAGCTACCTCACAGACTCTCTTGTTATTCTTACAAGTGAGCGTAATGGAATACCTATTGGTAAAATGACTACTTCAAAATGGTTGTATGTTTGTCCGAAAGGAATTCATGATCTGTTGCTGTATATCAAAACAAAGTACAACAACCCTTTGATCTATATCACTGAAAATGGTATAGATGAATTCAATGATCACACTCTATCACTTGAAGAAGCCTTAGCAGATACTTCAAGAATTGATTACTTTTATGATCATCTCTATTATCTTCAAAGTGCAATCGAGAATGGCGTGAATGTGAAAGGATATTTTGCATGGTCTTTAACTGACAGCTTCGAATGGAATTTAGGGTACATTTCAAGATTTGGAACAATCTTTGTAGATTACCATAACCTCAAAAGATATCCAAAGTCATCTGCCATTTGGTTTAGAGATTTCCTACAAGGCAAAATAGATACATATGACAATTAG 1593 0.3716 MKVSMKIAAMAFNLHLLSGVLLLMISVPICIEGSISIFSTDDFRSTSLNRSSFPKDFIFGAASSAYQCEGAANVGGRGPSIWDTYTHNRPDKILDRSNGDVSIDQYHRYKEDVENIKEMNMDAYRFSISWSRILPKGKVSGGVNKEGINYYNNLINELLAKGLKPFVTIFHWDLPQALEDEYDGFLSPNIVNDFQDYAELCFKEFGDRVKHWITLNEPWTFSKYGYADAISPPGRCSAWQNLSCTTGDSATEPYIVSHNQLLAHAASVNVYKTKYQVSQKGVIGISLSCHWIVPLYDTESDQFAAERALDFMFGWFMEPLTIGEYPKSMQSLVGSRLPKFSADEIKLVRGSFDFIGINYYTSYYASDTPELSEARPSYLTDSLVILTSERNGIPIGKMTTSKWLYVCPKGIHDLLLYIKTKYNNPLIYITENGIDEFNDHTLSLEEALADTSRIDYFYDHLYYLQSAIENGVNVKGYFAWSLTDSFEWNLGYISRFGTIFVDYHNLKRYPKSSAIWFRDFLQGKIDTYDN* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2101 530 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 57 71 IPR033132 -
Pvu11g2101 530 PANTHER GLYCOSYL HYDROLASE 10 526 IPR001360 GO:0004553|GO:0005975
Pvu11g2101 530 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 10 526 - -
Pvu11g2101 530 Pfam Glycosyl hydrolase family 1 51 522 IPR001360 GO:0004553|GO:0005975
Pvu11g2101 530 Gene3D Glycosidases 35 523 - -
Pvu11g2101 530 PRINTS Glycosyl hydrolase family 1 signature 351 365 IPR001360 GO:0004553|GO:0005975
Pvu11g2101 530 PRINTS Glycosyl hydrolase family 1 signature 427 435 IPR001360 GO:0004553|GO:0005975
Pvu11g2101 530 PRINTS Glycosyl hydrolase family 1 signature 450 461 IPR001360 GO:0004553|GO:0005975
Pvu11g2101 530 PRINTS Glycosyl hydrolase family 1 signature 471 488 IPR001360 GO:0004553|GO:0005975
Pvu11g2101 530 PRINTS Glycosyl hydrolase family 1 signature 495 507 IPR001360 GO:0004553|GO:0005975
Pvu11g2101 530 SUPERFAMILY (Trans)glycosidases 45 522 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2101 Pvu-Chr11 47999023 48003072 Dispersed/Proximal