Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2095 ATGAGTCCTCCAGCTGAATCCAACATGAGAGAAGATGGCAAGCCAGAAAATGTCACAGACCAAGTTGTGTCTCGCTTCGTAGAGTTCCTCAAGAATGAGTTAGCATTGGAAGAGAAAAGCTGTAAAGAAGCAATCGATTTGCTAGGAGAAACCAAACATATTCTTCTGACAAATTTTTCATCAATGGGGAATGGAACGGCTGAAGAAGCAGAGCGGTATTGGTTTGCTTTTATTTCATACTCTGTCAAGAAATTGATCCACAATAATGAGGAGGCTGGGAAGGAAGAGAATGCGATCACTGCACTTAGCTTGTGTCGTATATTGAGAGCAACTAAGCTCAACATTGCAGATTTTTTCAAAGAACTTCCACAGTTTGTTGTTAAGGCTGGTCCAACTTTGAGTAATCTATATGGAACAGATTGGGAAAACAAGCTGGAGGCAAAGGAGATACATGCCAATGCTATTCACTTAAAGATTCTTAGCAAGTACTATAAACGTGTATTTGGAGAGTTCTTTGTGACAACTGACTCAAATGCTGAAAGGAACTCATCTGTTATTGTTCATGCATCTGAATACCATCGAATTGGATGGTTGCTTTTCTTGGCTCTCCGTGTACATGCTTTCAGCCGCTTCAAAGACTTGGTGACTTGCACCAATGGTCTAATTTCAATCTTGGCCATCTTAATTATTCATGTTCCTACTCGATTTCGGAATTTCAACATTCATGACTCCTCACGCTTTGTTAAGAAAAATAATAAAGGTGTGGACCTCCTTGCTTCCCTTTGCAACATATGCAACACTACTGAAGATGAGTTGAGGAAAACAATGGAGAAAGCCAATAATGTAATAGCAGATATATTGAAGAAGAAGCCCTGTTTGGCATCTGAATGCGAAACTGAAAACCTAGAAAATATCGATAAAGATGGTTTGACCTATTTTAAAGACCTGATGGAAGAATCTTCTCTACCTTCTAGTTTAAATTTATTAGAAAAAGATTATGATTACATGATTCGCACCAAGAGTGAACTGGATGAGAGGTTATTCATTAATGAGGATGATAGCCTGTTAGCTTCAGGAAGCTTGTCTGGAGGTTCTATTTCAGCAGGTGGTGTGAAGAGGAAATTTGATTCACTGGCATCACCTGTTAAGACCATTACAAGTCCACTATCACCTCACCGCTCTCCCTCGTCACATCCTAATGGCATCCCAGGTAGCGCGAACTCAAAGATGGCAGCCACCCCTGTAAGCACAGCAATGACTACAGCAAAGTGGCTTCGAACTGTCATTTCTCCACTTGCACCGAAGCCCTCTCCAGAGCTGGAACGATTTCTGACATCATGTGATAGGGATGTTACAAGTGATGTAGTGCGCAGAGCACAGATTATATTGCAGGCTACATTTCCTAGTAGTCCACTTGGAGAACTATGTGTAACTGGAAGCCTGCAAAGTGCAAACCTCATGGACAATATATGGGCAGAACAACGAAGATTGGAAGCACTGAAGTTATACTACAGGGTATTGGAGGCAATGTGCAGAGCTGAAGCTCAAGTTTTTCATGCAACTAATTTGACCCCTCTTCTTACCAATGAGAGGTTCCATCGGTGTATGCTTGCATGTTCTGCAGAATTAGTCCTGGCAACTCATAAGACTGTAACAATGTTGTTCCCTGCAGTACTTGAGAGGACTGGAATTACAGCCTTTGATCTTAGCAAGGTGATTGAAAGTTTCATTAGACATGAAGAATCTCTGCCAAGAGAATTGAGGCGACATCTGAATTCATTGGAAGAACGACTTCTGGAGAGCATGGTATGGGAAAAGGGTTCTTCAATGTATAATTCTTTGGCAGTTGCCAGACCTGCCCTTTCTGCTGAGATAAATCGCCTGGGTCTGTTAGCTGAACCAATGCCATCATTGGACGAAATTGCAATGCAAATTAACTTCTCTTGTGGAGGACTGCCACCAGTGCCTACCTTGCCTAAGCTTGAAAGTTCACCAACTCAGAATGGGGATATAAGATCACCCAAGCGAAATGTATTGATGGAAAGAAATTCTCTAACTTCTCCTGTGAAAGATCGGCTTCTTCCCTTCAGCAACCTTAAGTCAAAACTACCGCCACCACCTTTGCAGTCTGCATTTTCCAGCCCAACAAAGCCAAATCCAGCAGGTGGAGGGGAAACGTGTGCAGAAACTGGGATCAACATCTTTTTTGGCAAGATCATTAAGTTGGGAGCAGTCAGAATTAGTGGCATGGTTGAAAGACTACAATTATCTCAGCAGATAAGGGAGAATGTATACTGTCTTTTCCAGCGGATTCTAAATCAACGGACATCTCTCTTTTTCAACCATCATATAGACCAAATCATCTTGTGTTGTTTCTATGGAGTTGCAAAGATTTCACAATTAAACCTAACCTTTAGAGAGATAGTATACAACTACAGAAAGCAGCCACATTGCAAACCACAAGTTTTCCGCAGTGTATTTGTTGATTGGTCATTAGCACGCCGAAATGGGAGAACAGGACAGGAGCATGTTGACATCATCACCTTTTACAATGAAATATTTATTCCCTCTGTAAAGCCACTGCTGGTTGAACTTGACCCTTCTGGAGCAACTACAAAAAGCGACCGAATACCTGAAGTTAATAATAAAAATGATGGCCATTTAGCTCAATGTCCAGGATCTCCTAAAATATCATCTTTCCCTACCCTTCCCGATATGTCTCCAAAAAAAGTATCTGCTACACACAATGTTTATGTCTCTCCATTACGATCGTCCAAGATGGACGCTCTAATATCACACAGCTCAAAAAGCTATTATGCATGTGTTGGGGAGAGCACTCATGCTTATCAGAGCCCTTCAAAAGACCTGACTGCTATCAATAACCGTTTGAATGGCAACAGGAAGGTGAGAGGACCCCTGAATTTTGATGATGTTGATGTGGGCTTGGTTAGTGATTCTATGGTTGCAAACAGCCTCTATCTGCAGAATGGAAGTTGTGCATCATCATCAGGTGCACCAGTGAAATCAGAGCAACCTGACTCTTAA 3045 0.4171 MSPPAESNMREDGKPENVTDQVVSRFVEFLKNELALEEKSCKEAIDLLGETKHILLTNFSSMGNGTAEEAERYWFAFISYSVKKLIHNNEEAGKEENAITALSLCRILRATKLNIADFFKELPQFVVKAGPTLSNLYGTDWENKLEAKEIHANAIHLKILSKYYKRVFGEFFVTTDSNAERNSSVIVHASEYHRIGWLLFLALRVHAFSRFKDLVTCTNGLISILAILIIHVPTRFRNFNIHDSSRFVKKNNKGVDLLASLCNICNTTEDELRKTMEKANNVIADILKKKPCLASECETENLENIDKDGLTYFKDLMEESSLPSSLNLLEKDYDYMIRTKSELDERLFINEDDSLLASGSLSGGSISAGGVKRKFDSLASPVKTITSPLSPHRSPSSHPNGIPGSANSKMAATPVSTAMTTAKWLRTVISPLAPKPSPELERFLTSCDRDVTSDVVRRAQIILQATFPSSPLGELCVTGSLQSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQVFHATNLTPLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVARPALSAEINRLGLLAEPMPSLDEIAMQINFSCGGLPPVPTLPKLESSPTQNGDIRSPKRNVLMERNSLTSPVKDRLLPFSNLKSKLPPPPLQSAFSSPTKPNPAGGGETCAETGINIFFGKIIKLGAVRISGMVERLQLSQQIRENVYCLFQRILNQRTSLFFNHHIDQIILCCFYGVAKISQLNLTFREIVYNYRKQPHCKPQVFRSVFVDWSLARRNGRTGQEHVDIITFYNEIFIPSVKPLLVELDPSGATTKSDRIPEVNNKNDGHLAQCPGSPKISSFPTLPDMSPKKVSATHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRGPLNFDDVDVGLVSDSMVANSLYLQNGSCASSSGAPVKSEQPDS* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2095 1014 Pfam Domain of unknown function (DUF3452) 101 231 IPR024599 -
Pvu11g2095 1014 Gene3D - 192 350 - -
Pvu11g2095 1014 MobiDBLite consensus disorder prediction 701 723 - -
Pvu11g2095 1014 Pfam Retinoblastoma-associated protein A domain 413 614 IPR002720 GO:0005634|GO:0051726
Pvu11g2095 1014 SUPERFAMILY Cyclin-like 421 616 IPR036915 -
Pvu11g2095 1014 Gene3D - 416 604 - -
Pvu11g2095 1014 SMART RB_A_2 413 614 IPR002720 GO:0005634|GO:0051726
Pvu11g2095 1014 Coils Coil 27 47 - -
Pvu11g2095 1014 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 27 1001 IPR028309 GO:0006357|GO:0051726
Pvu11g2095 1014 MobiDBLite consensus disorder prediction 385 409 - -
Pvu11g2095 1014 Pfam Retinoblastoma-associated protein B domain 732 859 IPR002719 GO:0005634|GO:0051726
Pvu11g2095 1014 SUPERFAMILY Cyclin-like 730 869 IPR036915 -
Pvu11g2095 1014 SMART DUF3452_2 96 231 IPR024599 -
Pvu11g2095 1014 Coils Coil 269 289 - -
Pvu11g2095 1014 Gene3D - 696 882 - -
Pvu11g2095 1014 PANTHER BNACNNG22930D PROTEIN 27 1001 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Pvu11g2095 RB_A 5.2e-64 CL0065