Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2094 ATGGCCTTAGAATTTGTCGGTGGTGCTCTTCTCTCTGCTTTTCTTCAGGTTGCATTTCAGAAGCTAGCTTCTCCTCAAATTCTCGATTTCTTTCATGCAAGAAAGCTTGATCAAAATCTGCTTAACAACTTGGAAATCAAGCTGCACTCCATCCATTCTCTGGCTGATCATGCAGAGCGAAAGCAGTTCATGGATCCTCATGTCAGAAACTGGCTGCTTAAGGTCAAAGATGTTGTCCTTGATGCAGAGGATCTCTTGGATGATATACAAAAACTCTCCAAAAGACAACTAGATGCTGAATCTGAATCTCAAAGCTGTTCAGACTGTACTTGCAAGGTACTCAATTTCTTCAAATCTTCTCCTACTACTATTAGTTCCCTTAACAAGGAAATTGAGTGTAGGATGAAACAAATCCTTGACGACTTAGAATTTCTCTCAAGCCAAAGGGGTGATCTAGGATTGAAAACAGCTAGCGGTGTTGGATATGGGTTGAGTAATGAACTTCCACAAAAATCCCAAACAACATCTTTGGTTGTTGGAACTGATATTTATGGCAGAGATGATGATAAAGAACTGGTTTTTGACTGGATGACATCTAACAAAAACAATAGTAACCAGCCATCAATACTCTCTATCGTGGGCATGGGTGGAGTGGGTAAGACCACTCTTGCTCAACATGTATTCAATGACCCAAAGGTGGATGAGGCTAAATTTGTCGTCAAAGCCTGGGTATTTGTTTCAGATGAATTTGATGTTTTCAAGATATCAAGAGCAATTCTTGAGGCTGTTACTAAATCAACTGATGATAGTAGAGATCTAGAGATGGTTCACACAAGATTGAAGGAAGAATTGACGGAGAAGAAATTTCTTCTTGTTTTGGATGACGTTTGGAATGAAAACCAACCTAAATGGGAGGAAGTGCGGAAGCCCCTTACTTTTGGGGCCAAGGGAGTAGAATTCTTGTTACCACACGTACAATTACAGGAAGATGAGTGTTGGAAGTTGTTTGCTAAACATGCATTTCGAGATGATGATACTCAACCCGATCCAGAGTGCAGGAAGATTGGCATGGAGATTGTTAAAAAATGTAAAGGACTACCTCTTGCCTTGAAAACAATGGGAAGTCTATTATACAACAAATCATCTATTTCAGAATGGAAAACTGTGTTCCAAAGCGAAATATGGGAATTTTCAAATGAGTGTTGCGGTATTATTCCTTCTTTAGCATTGAGCTATATCCACCTTCCATCCCATCTAAAGGTATGCTTTGCTTACTGTGCCCTATTCCCCAAGGATTATGAGTTTAAAAAGGAGAGTTTAATTCAGTTGTGGATGACTGAAAATTTCCCACATTGTCGTCAACATATTAGGACTCCAGAAGAAGTTTGCCAACAATACTTCAATGATCTACTATCAAGGTCTTTCTTCCAACCATTAGATGAAAATAAAAAGGTATTTGACAAGCAACACTTCAATGATGTACTATCAAGGTCATTCTTCCAACAATCAGATAAAAATAAAGAAGTATTTGTCATGCATGACCTTCTACTTGATTTGGCAAAATATGTAGGTGGAGGCCTATACTTCAGGTGTGAACTTAATCAAACAGAAAATATACAGAAAGCAACTCGTCATTTTTCATTTGAACTTGGATACAATCAATATTTTGATGGGTTTGGAACTTTATGTAATACAGAAAGCTTACGTACATTTATGTCAAAATCTATGAGCCTGAATTATTTCTGGAGTTGTCATATGAAAATGTCGATACATGAATTGTTATCCAAGTTTAAGTTCATACGTATCTTATCTCTGTCTTATTTTTCTAACCTTCAAGAGTTACCAAACTCTGTTGGCAATCTTGAGCATCTATGTTCCATAGACCTCTCTCGTACTGCAATAAAAAGAATAACTGAAAAAATATGTTTACTCTCTCACTTGCAAATACTGAAGTTCAATTACTGTAAAGATTTGGAGGTGTTGCCCTCAAATTTGCATTTACTCACCAATTTGTGTCGCCTTGAATTTAAAGAGACTAAAGTGAGAAAGATTCCACCGCATTTGGGAAAACTGAAGAATCTTAAAGTAGTAATAAATTCTTTTAATGTTGGCTTTAGTAGGGAGTTCAATTTTCAACAACTAGGAGAGCTCAACCTTGATGAAAGCCTATCAATTGAGGAGCTACAAAATGTTGAGAACTCGGTAGATGCATTAGAAGCAGATTTGAAGAATAAACCACACCTTGTGACGTTGGAGTTGCGATGGAAGGAGAATCGGAACTCTATTGATTCAAAGAAAGAAGAGGACATAATTGAGAATCTGAAACCTTCCAAAAACTTAAAGGAATTGTCAATCTTTGGCTATAGTGGGAAACAATTTCCAAAATGGTTACTAGAAAATTCATTGTGGAATATGACGTCTTTAGTGTTGGATGAATGTAAATCTTGTCAATGTTTACCTCCCCTTGGACTTTTGCCGTTTCTCAAGGCATTGGAGATTACAAAACTTGATGGGATAGTGAATATTGATGGTGATTTTTATGGGAACAACTCTTGTTCATTTAAATCCCTAGAAAGATTGGAGTTCTTCAATATGAGTCAATGGGAAAAGTGGGACTGCCAAGCTGTGACAGGTGCTTTTCCACGTCTACAAGAGCTTTCCATAACAAATTGTCCCAAACTGAAAGGACAGCTACCACAGCAACTTGTTCCTTTGGAAATACTACAAATTGAAGACTGTGAACAACTTGAGGCTTCAAGTCCCAGGGCTCTATATTTAAATCTACGTTACAGTGGAAAGCTGCAGTTGGAGTGGGCTACAATGAAATGGCTTGTAATGGGTGGCCACAACATGGAATCATCATTGCAGGAAATTGTTGGGTCTGACAGTCTTGAACACTTAATGATTTATTCACCTCTCGAGTCAATCAGTGATGACTGTGTCTCTCTGTGGAACTTTCCACTAGATATCTTCCCAACACTCAGCACGCTTCATCTCACTGGGTTTCCTAATTTACAGATGATTTCACAGGGTCTCATCCATAATCATCTGAAGGATCTGCAAATCATTAGGTGCCATAAATTCGAATCATTGCCTACAAACATGCATATGCTGCTTCCATCTCTCAGCTTGTGCATTGCAAAATTGGATGCAAAATGTTCTCCAGATGAAGGTTTGCTTCCACTCTCTCTTACTTCTCTAACCATCTCTTGTGGTGGAAATCTAGAGAAACTGAACTACAAGGATGAAGGTTTGCTTCGAGTCTCTCTTACTTCTCTAACCATTCGTCGCTGTCCAAATCTAGAAAACTGGACTACAATGCGTTGCCAGAAAGAAGGAGGCGAAGACTAG 3351 0.3835 MALEFVGGALLSAFLQVAFQKLASPQILDFFHARKLDQNLLNNLEIKLHSIHSLADHAERKQFMDPHVRNWLLKVKDVVLDAEDLLDDIQKLSKRQLDAESESQSCSDCTCKVLNFFKSSPTTISSLNKEIECRMKQILDDLEFLSSQRGDLGLKTASGVGYGLSNELPQKSQTTSLVVGTDIYGRDDDKELVFDWMTSNKNNSNQPSILSIVGMGGVGKTTLAQHVFNDPKVDEAKFVVKAWVFVSDEFDVFKISRAILEAVTKSTDDSRDLEMVHTRLKEELTEKKFLLVLDDVWNENQPKWEEVRKPLTFGAKGVEFLLPHVQLQEDECWKLFAKHAFRDDDTQPDPECRKIGMEIVKKCKGLPLALKTMGSLLYNKSSISEWKTVFQSEIWEFSNECCGIIPSLALSYIHLPSHLKVCFAYCALFPKDYEFKKESLIQLWMTENFPHCRQHIRTPEEVCQQYFNDLLSRSFFQPLDENKKVFDKQHFNDVLSRSFFQQSDKNKEVFVMHDLLLDLAKYVGGGLYFRCELNQTENIQKATRHFSFELGYNQYFDGFGTLCNTESLRTFMSKSMSLNYFWSCHMKMSIHELLSKFKFIRILSLSYFSNLQELPNSVGNLEHLCSIDLSRTAIKRITEKICLLSHLQILKFNYCKDLEVLPSNLHLLTNLCRLEFKETKVRKIPPHLGKLKNLKVVINSFNVGFSREFNFQQLGELNLDESLSIEELQNVENSVDALEADLKNKPHLVTLELRWKENRNSIDSKKEEDIIENLKPSKNLKELSIFGYSGKQFPKWLLENSLWNMTSLVLDECKSCQCLPPLGLLPFLKALEITKLDGIVNIDGDFYGNNSCSFKSLERLEFFNMSQWEKWDCQAVTGAFPRLQELSITNCPKLKGQLPQQLVPLEILQIEDCEQLEASSPRALYLNLRYSGKLQLEWATMKWLVMGGHNMESSLQEIVGSDSLEHLMIYSPLESISDDCVSLWNFPLDIFPTLSTLHLTGFPNLQMISQGLIHNHLKDLQIIRCHKFESLPTNMHMLLPSLSLCIAKLDAKCSPDEGLLPLSLTSLTISCGGNLEKLNYKDEGLLRVSLTSLTIRRCPNLENWTTMRCQKEGGED* 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2094 1116 Gene3D Ribonuclease Inhibitor 563 938 IPR032675 -
Pvu11g2094 1116 Gene3D - 20 147 - -
Pvu11g2094 1116 Coils Coil 41 61 - -
Pvu11g2094 1116 Pfam Rx N-terminal domain 11 100 IPR041118 -
Pvu11g2094 1116 PRINTS Disease resistance protein signature 209 224 - -
Pvu11g2094 1116 PRINTS Disease resistance protein signature 283 297 - -
Pvu11g2094 1116 PRINTS Disease resistance protein signature 363 377 - -
Pvu11g2094 1116 PRINTS Disease resistance protein signature 900 916 - -
Pvu11g2094 1116 SUPERFAMILY L domain-like 511 917 - -
Pvu11g2094 1116 SUPERFAMILY RNI-like 854 1102 - -
Pvu11g2094 1116 Coils Coil 128 148 - -
Pvu11g2094 1116 Coils Coil 82 102 - -
Pvu11g2094 1116 Pfam NB-ARC domain 191 391 IPR002182 GO:0043531
Pvu11g2094 1116 Gene3D - 167 318 IPR027417 -
Pvu11g2094 1116 Gene3D - 326 410 IPR042197 -
Pvu11g2094 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 426 IPR027417 -
Pvu11g2094 1116 Gene3D - 411 522 IPR036388 -
Pvu11g2094 1116 PANTHER OS05G0414200 PROTEIN 13 484 - -
Pvu11g2094 1116 PANTHER OS05G0414200 PROTEIN 487 1034 - -
Pvu11g2094 1116 PANTHER DISEASE RESISTANCE PROTEIN RP 13 484 IPR044974 GO:0006952
Pvu11g2094 1116 PANTHER DISEASE RESISTANCE PROTEIN RP 487 1034 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2094 Pvu-Chr11 47922232 47926112 Tandem