Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2087 ATGGTGGTCTTATCTTCTTTCTGGGGCTCTGCACAATCACTGCTTGCCCTTGTGGCTATCATTATTGTGCTATTCCGGCAAACTCACGGTGCCCAGGATCGTCCATTCTGTGCTCCTTCTTCCTGTGGCAAAATTGGCAACATTAGTTATCCTTTCCGACTCAAAGGCGACCCACCTGGTTGCGGCCTCCCAAGGTACGAACTAGATTGTGTAAAGAATGTGACAGTGTTCACTTTATTTTCAGGGAAATACCATGTTCAGAATATCAACTATGAAACATACAAGATCCAATTGAGTGATGCAGGTCTTGAGGAGGACACTGCTTGCTTCATTCCTCGCTATTTCATCTCTACATGGAACTTCACTTACATTGGTGGTCCTCAAAGTTACGCCACCGATCCACTAACTTTCTGGAATGGGAATGAGACTCCTGATTGGCCTCCTTATGTAGCATTTCTAAACTGCAGTGATCCAGTGAGTGATGATCCTCGATACGTGGAAGTGAATGGCAGACTTTGTGATTCTGGAGGCCATGTCTATGCTGTTCTTTCTTCTTCTTCTAAATTCACAATGATGGACATCAAGGTTGGCTGCCATTTACAGTCTGCTACCTTTACAAACAATAACCATTGCAACAACCTTTCCTATGCTCATATCCATGACTGCCTGCATAATGGGTTTTCGTTGTCTTGGGTGATGCCAGTTATTTGTACAGACCAATGTGGAAAGGGTGCGAGATGCCTCATCAATCAAACCACTCATCAAATTGGATGTGTACAAGATTCCTATTGCCAAGTTTTGGGCGTAGGATTGGAAAAGAGGCACTGTGGAATTGAACACCAGATTCTTCAATATGCAGTTGGAATTCTAAACTATATAGCACGACTAATCTATAGAATAACACGTTCACAGCACTTCTCGAAATGGAAAGTGGAAGGAGATTTGATTTTAATAGCCCCTGTTCTAATATTTGTGGCTGCAAGATTTTTATTTGGAGTGACACTTTTGCTTGCACTATTTATCCATACGTGGCGACGTAGGCATTACTCGATGTATGAAAACATTGAAACTTTTTTGCTAAACAACAATCTAAATCCTATTAGGTACGAATACAGAGAAATTAAGAAAATGAGCAGAGGTTACAAAGTTAAATTGGGTGAAGGAGGTTTCGGATCTGTATACAAAGGAAAACTTCGAAGTGGGTCAGAAGTAGCAATAAAGATGTTGAAAAAATCGAAAGCTGATGGACAAGATTTTATGAATGAAGTGGCTAGCATTGGAAGAATACATCATGTGAATGTGGTACATCTCATTGGATATTGTGCTGAAGGACAAAAGCGTGCTCTAGTTTATGACTACATGCCAAATGGTTCATTGGATAAATACATCTTCTCCAAAGAGGAAAGTATCCCTTTAAGTTATGAGAAAACATATGAAATATCTCTTGGCATAGCTCGTGGGATTGCTTATCTCCATCAAGGCTGTGATGTGCAAATTCTACATTTTGATATTAAGCCTCATAATATTCTTCTAGATGATGACTTCATTCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTATATTCTTGCGAAGATACGTCTGTTGCTTTAACTATGGCTAGAGGAACTTTAGGTTACATGGCTCCAGAACTATTCTACAATAATATTGGTGGAGTATCCAATAAGGCCGATGTGTATAGTTTTGGAATGCTTTTGATGGAAATTGGAAGTAGGAGAAGGAACTCAAATCCTCATGCAGAACATTCAAGCCAACAGTACTTCCCCTTTTGGATATATGATCAAATTAAAGATGAAAAAGAGACTCACATAGAAGATGCCTCAGAAGAGGATAAGATTTTGGTGAAAAAAATGTATGTAGTTGCGCTTTGGTGTATACAACTGAAACCAAATGACCGTCCTACAATGAAGAGAGTTGTGGAGATGCTTGAAGAAAAAGTTGAAAGTCTTGAAATGCCTCCTAAGCCTGTTTATTATCCCCATGAAACAGTTGAACATGACTGTGGAGACAACTCAAACCAAACATCATGGAGTGGTTCAACTAGTTCTAGCGAATATGTTGGCAAAACCAACACTAACATCCATGGGAGAGCAACGATTTGA 2121 0.3979 MVVLSSFWGSAQSLLALVAIIIVLFRQTHGAQDRPFCAPSSCGKIGNISYPFRLKGDPPGCGLPRYELDCVKNVTVFTLFSGKYHVQNINYETYKIQLSDAGLEEDTACFIPRYFISTWNFTYIGGPQSYATDPLTFWNGNETPDWPPYVAFLNCSDPVSDDPRYVEVNGRLCDSGGHVYAVLSSSSKFTMMDIKVGCHLQSATFTNNNHCNNLSYAHIHDCLHNGFSLSWVMPVICTDQCGKGARCLINQTTHQIGCVQDSYCQVLGVGLEKRHCGIEHQILQYAVGILNYIARLIYRITRSQHFSKWKVEGDLILIAPVLIFVAARFLFGVTLLLALFIHTWRRRHYSMYENIETFLLNNNLNPIRYEYREIKKMSRGYKVKLGEGGFGSVYKGKLRSGSEVAIKMLKKSKADGQDFMNEVASIGRIHHVNVVHLIGYCAEGQKRALVYDYMPNGSLDKYIFSKEESIPLSYEKTYEISLGIARGIAYLHQGCDVQILHFDIKPHNILLDDDFIPKVSDFGLAKLYSCEDTSVALTMARGTLGYMAPELFYNNIGGVSNKADVYSFGMLLMEIGSRRRNSNPHAEHSSQQYFPFWIYDQIKDEKETHIEDASEEDKILVKKMYVVALWCIQLKPNDRPTMKRVVEMLEEKVESLEMPPKPVYYPHETVEHDCGDNSNQTSWSGSTSSSEYVGKTNTNIHGRATI* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2087 706 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 681 IPR045874 GO:0004672
Pvu11g2087 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Pvu11g2087 706 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Pvu11g2087 706 Pfam Protein tyrosine and serine/threonine kinase 383 649 IPR001245 GO:0004672|GO:0006468
Pvu11g2087 706 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
Pvu11g2087 706 CDD STKc_IRAK 385 651 - -
Pvu11g2087 706 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 5 681 - -
Pvu11g2087 706 SMART serkin_6 381 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g2087 706 MobiDBLite consensus disorder prediction 675 706 - -
Pvu11g2087 706 ProSiteProfiles Protein kinase domain profile. 379 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g2087 706 SUPERFAMILY Protein kinase-like (PK-like) 366 650 IPR011009 -
Pvu11g2087 706 Gene3D Transferase(Phosphotransferase) domain 1 454 659 - -
Pvu11g2087 706 Gene3D Phosphorylase Kinase; domain 1 356 453 - -
Pvu11g2087 706 MobiDBLite consensus disorder prediction 664 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2087 Pvu-Chr11 47810634 47813818 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu11g2087 PK_Tyr_Ser-Thr 1.3e-48 CL0016