Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2086 ATGGCAGAAATTGTTACCGGTGCTCTTTTTTCTGTTTTCCTCGATAGGACTATTGACACTTTGGCTTCCCGTTTTGTCCACATATTCGGTGCAAGAAAACACAATAAGAAGCAACTCAGCCACTTGAAGATGAAGCTCCTAGCCATTGATGTTGTGGCTTTTGATGCAGAGCAAAAGCAGTTCACAGATCCACGTGTGAGAGATTGGCTTCTCAGGGCCAAAGATGTTGTGTTTGATGCAGAAGATCTCTTGGAGGAAATAGATTATGAACTCTTCAAAACCCAAGTGGAAGCTGAGTCTCAGAGTGCTACTAACAAGGTGTGGAATTCCCTCAAATCTTCTTTTGTCACTTTCTTTGAAAATGAAATTGAATCCAGAATGGAACAAGTCACTGAAGACCTAGAAGATCTTGCAACCCAAAGCGATTTTCTAGGTTTGAAAAAGGTTAGTGGTGTTGGGGTTGGATCGGCATCGAGTAGTAAATTAACATATACATCTTTGCCAAATGAAAGTGTTATGTATGGCAGAGATGAAGACAGAGACTTTGTGTTTAACTGGCTCACATCTGACACTCATAGAAACCTATCTATACTTTCTATTGTGGGCATGGGTGGGTTGGGTAAGACCTCACTTGCCCAACATGTATTCAATGACCCAAGGATTGAAGGTAAATTTGATATTAAAGCTTGGATCAGTGTTCCACAGGAATTTGATGTTCTCAATGTATCAAGAGCAATTCTTGACACAATTACTGGTTCAACTGAGCATAGTATACAGCAGGAAGTGGTTCAGAGAAGACTGAAAGAAAAATTGACGGGGAAGAAATTTCTTCTTGTTTTGGATGACAATTGGAACGAAAACCAATCTAAATGGGAACAAGTGCAAAAAGCTCTTGGTTTTGGGGCCCAAGGAAGTAGGCTTCTTGTGACGACACGCAGTAAGAATGTTGCTAATGCCATGCGGTCAGAAGAACACCTCCTGCAGCTATTAAGAAAAGACTATTGCTGGGACTTGTTCGCAAAACATGCATTCCAAAATGTTAGTCCTCAACCGGATCCAGACTTCGTGGAGATTGGTAAGAAGATAGTTGAAAAATGTAATGGGCTTCCTTTAGCCTTGAAAACAATGGGAAGTCTATTACACAATAAATCATCCTTTTGGGAATGGGAAAGCATTATGAAAAGTGAGATATGGGATTTGTCAGAAAATGATAGTGATATACTCCCTGCTTTAAGATTGAGTTACGTCCACCTTCCTTCTCATCTGAAGAAATGTTTTGCTTTTTGTGCCTTATTTCCCAAGGGTTATGAGTTTGACAAGGAGTGTTTAATTCAACTGTGGTTGGCTGAAAATTTTCTAGAAAGCCCTCTACAGAAAAAGAGTCCTAAAGAAGTTGGAGAACAATATTTCAATGATCTGTTATCGTGGTCCTTCTTTCAACAATCCGGCAACGAAGCGAAAGAGCATTTTATCATGCATGACCTTCTGAATGATTTGGCAAAATACGTGAATGAGGACATCTGCATCAGGTTAGGAGTTGATGAACCAAAAGGTATACCCAAAACAATCCGTCATTTGTCATCTACAACCACTCGTGATTTACATTTTGATGGGTTTGGGAGTTTGATTGATACTCAAAAGTTGCATACATTTATACAAACAGCTTGGGAGTGGCATTGCACGATGCCAATAGATGACCTGTTTTCCAAATTTAAGTTGATACGTGTCTTATCTTTGTCTAACTGTTGTAATCTTACAGAGGTGCCTAAATCTGTAGAAAATCTTAAGCATCTCCGTTCATTAGATCTCTCCTATACTGACATAGAAAAACTTCCTGACTCAATAAGTTTACTCTATAAGTTGCAAATACTGAAGCTGAACCACTGTACAGAACTAGAGGAGCTTCCCTCATGTTTACATCAACTCTACAATTTGCGTTGCCTTGAATTTATAAATACTGGAGTGAAAAATGTGCCACCACATTTGGGAAAGCTGAAGAATCTCCAAGTATTGATGAGTTCGTTTGACGTTGAGAAAAGTAAGGAATTCAGTATTCAGCAATTAGGAGAACTGAATCTCCATGGAAGTCTAACAATTCATGAGCTGCAGAATATTGAGAATCCCTCTTATGCATTAGAAGCAGATTTGAAGAACAAACCACACCTTGTGAAGCTATATTTAGAGTGGAATATTATGAGCAGCTCCTCTATTGATTCAACAAAAGCTGGGGATGTAATTGAGAATCTTCGACCTTCAAAACACTTGAAGGAGTTATCAATATGGTACTATATTGGTAAACAATTTCCAAATTGGTTACTCGATAATTCATTACCAAATCTGGTGTCCTTAGAGCTGCGCAATTGTATATGTTGCCAACGTTTTCCTCCGCTTGGTCTTTTGCCGTTTCTGAAGAAGCTGGAGATTTCAGGGTTTGATGAGATAGTGAGTATTGATGCTGATTTTCATGGCAACAACTCTTCTTCATTTAAGTCCCTGGAAAGGTTGGAGTTCCAGGATATGAAACAATGGGAAAAATGGGAATGCCAAGCTGTGACAGGTGCTTTTCCAAATCTTCAATTTCTTGTGATAAGAAATTGTCCAAAGCTGAAAGGACAACTGCCAGAGCAACTTGTTCCTTTGAAAATACTACACATTACAGATTGCCAACAACTTGAGGCTTCCACTCTCAGAGCTCTTGATTTAGAACTACGTGACTGTGGAAAGCTGCAGTTGGACTGTGCTACAATGAAAAAACTCAGAATGGAAAAAGCATCATTGCTGGAAATTGTTAGGTCCAACACTCTTGAAGACTTGCGCATTGATTCACCCCTGGACTCTCTACTGACCTTTCAACTGGATTTGTTCCCAACACTCAGGACGCTTGATTTAGACTGTCCAGGACTAAAGACATTCCCTGATGGAGATTTCCCATCAAATCTCCAGACTCTCACAATAAAAGACTGTCCAAAACTTGAGTCCTTCCCTGATGAAGGTTTCCCATCAAATCTCCAGACTCTGACAATAAAAGGTTGTACAGAACTGAAGTCGTTCCCTGAGGGAGGTTTTTCATCAAATCTAGAAGAGCTGAAAATAGAAGACTGTCCAAGACTTGAGTCCTTCCCTCAAAGAGGTTTCCAATCAAATCTAGATTACATAACTCTCAAGAATTGCTCTAGGCTTGTTGGCTCACTGAAAGGAGCTTTCGGAGACAGTTCTTCTTTGAAAAACTTGTGGATTGATAAGCTGGTTGCAAAATGTTTTCCTGATGAAGATTTGCTTCCAGTCTCTCTTACTTCTCTATCCATCTATCATTGTCCAAATCTAGAGAAACTGGAGTACAAGGGTCTCTATCAACTCTCATCCCTTCAAACAATGACACTTTTTGACTGCCCCAACCTCCAACGCCTACCAGAGGAGGGTCTTCCCAAATCAATTTTAAGTCTTACAATAAAGCAGTGTCCTTTGCTGGAACAGCGTTTCCAGAAAGAAGGAGACGAAGACTGGGAAAAGATTGCGCACATTCAAAAACTGTACATATAG 3540 0.398 MAEIVTGALFSVFLDRTIDTLASRFVHIFGARKHNKKQLSHLKMKLLAIDVVAFDAEQKQFTDPRVRDWLLRAKDVVFDAEDLLEEIDYELFKTQVEAESQSATNKVWNSLKSSFVTFFENEIESRMEQVTEDLEDLATQSDFLGLKKVSGVGVGSASSSKLTYTSLPNESVMYGRDEDRDFVFNWLTSDTHRNLSILSIVGMGGLGKTSLAQHVFNDPRIEGKFDIKAWISVPQEFDVLNVSRAILDTITGSTEHSIQQEVVQRRLKEKLTGKKFLLVLDDNWNENQSKWEQVQKALGFGAQGSRLLVTTRSKNVANAMRSEEHLLQLLRKDYCWDLFAKHAFQNVSPQPDPDFVEIGKKIVEKCNGLPLALKTMGSLLHNKSSFWEWESIMKSEIWDLSENDSDILPALRLSYVHLPSHLKKCFAFCALFPKGYEFDKECLIQLWLAENFLESPLQKKSPKEVGEQYFNDLLSWSFFQQSGNEAKEHFIMHDLLNDLAKYVNEDICIRLGVDEPKGIPKTIRHLSSTTTRDLHFDGFGSLIDTQKLHTFIQTAWEWHCTMPIDDLFSKFKLIRVLSLSNCCNLTEVPKSVENLKHLRSLDLSYTDIEKLPDSISLLYKLQILKLNHCTELEELPSCLHQLYNLRCLEFINTGVKNVPPHLGKLKNLQVLMSSFDVEKSKEFSIQQLGELNLHGSLTIHELQNIENPSYALEADLKNKPHLVKLYLEWNIMSSSSIDSTKAGDVIENLRPSKHLKELSIWYYIGKQFPNWLLDNSLPNLVSLELRNCICCQRFPPLGLLPFLKKLEISGFDEIVSIDADFHGNNSSSFKSLERLEFQDMKQWEKWECQAVTGAFPNLQFLVIRNCPKLKGQLPEQLVPLKILHITDCQQLEASTLRALDLELRDCGKLQLDCATMKKLRMEKASLLEIVRSNTLEDLRIDSPLDSLLTFQLDLFPTLRTLDLDCPGLKTFPDGDFPSNLQTLTIKDCPKLESFPDEGFPSNLQTLTIKGCTELKSFPEGGFSSNLEELKIEDCPRLESFPQRGFQSNLDYITLKNCSRLVGSLKGAFGDSSSLKNLWIDKLVAKCFPDEDLLPVSLTSLSIYHCPNLEKLEYKGLYQLSSLQTMTLFDCPNLQRLPEEGLPKSILSLTIKQCPLLEQRFQKEGDEDWEKIAHIQKLYI* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2086 1179 Pfam Rx N-terminal domain 15 101 IPR041118 -
Pvu11g2086 1179 Gene3D - 414 503 IPR036388 -
Pvu11g2086 1179 Pfam NB-ARC domain 180 394 IPR002182 GO:0043531
Pvu11g2086 1179 Gene3D Ribonuclease Inhibitor 511 911 IPR032675 -
Pvu11g2086 1179 PANTHER OS05G0414200 PROTEIN 20 875 - -
Pvu11g2086 1179 Gene3D - 15 136 - -
Pvu11g2086 1179 ProSiteProfiles Leucine-rich repeat profile. 597 618 IPR001611 GO:0005515
Pvu11g2086 1179 SUPERFAMILY L domain-like 933 1156 - -
Pvu11g2086 1179 Gene3D Ribonuclease Inhibitor 912 1139 IPR032675 -
Pvu11g2086 1179 PANTHER DISEASE RESISTANCE PROTEIN RP 20 875 IPR044974 GO:0006952
Pvu11g2086 1179 Gene3D - 330 413 IPR042197 -
Pvu11g2086 1179 PRINTS Disease resistance protein signature 197 212 - -
Pvu11g2086 1179 PRINTS Disease resistance protein signature 270 284 - -
Pvu11g2086 1179 PRINTS Disease resistance protein signature 366 380 - -
Pvu11g2086 1179 PRINTS Disease resistance protein signature 569 585 - -
Pvu11g2086 1179 Coils Coil 120 140 - -
Pvu11g2086 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 429 IPR027417 -
Pvu11g2086 1179 Gene3D - 156 329 IPR027417 -
Pvu11g2086 1179 SUPERFAMILY L domain-like 492 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2086 Pvu-Chr11 47805798 47809484 Wgd