Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2070 ATGGCAGAAATTGTTACCGGTGCTCTTGTTTCTGTTGTCCTCGAAAGAACTATTGACACTTTGGCTTCCCGTTTTGTCCACATATTTCGTGGAAGAAAACACAAAAAGAAGCAACTCAGCCACCTGAAGATGAAGCTCCTAGCCATTGATGTTGTGGCTTTTGATGCAGAACATAAGCAGTTCACAGATCCTCGTGTGAGAAATTGGCTTCTCAGGGCCAAAGATGTTGTGTTTGATGCAGAAGATCTCTTGGATGAAATAGATTATGAACTCTCCAAAAGCCAAGTGGAAGCTGAGTCTCACAGTGCTACTAACAAGGTGTGGAATTCCCTCAAATCTTCTTTTCTCAGTTTCTTTGAAAATGAAATTGAATCCAGGATGGAACAAGTCACTGAAGACCTAGAAGATCTTGCAACCCAAAGCGATTTTCTAGGTTTGAAAAAGGCTAGTGGTGTTGGGGTTGCACCAGGATCGAGTAGTAGATTAACATATACATCTTTGCCAAATGAAAGTGTTATGTATGGCAGAGATGAAGACAGAGAATTTGTGTTTAATTTGCTCACATCTGACAGTCACAAAAACCTATCTATACTTTCTATTGTGGGCATGGGTGGGTTGGGTAAGACCTCACTTGCCCAACATGTATTCAATGACCCAAGGATTGAAGGTAAATTTGATATTAAAGCTTGGATCAGTGTTCCACAGGAATTTGATGTTCTCAATGTATCAAGGGCCATTCTTGACACAATTACAGGTTCAACTGTTCATAGTATACAGCAGGAAGTTATTCAGAGAACACTGAAAGAAAAATTGACGGGGAAGAAATTTCTTCTCATTTTGGATGACGTTTGGAACGAAAGGCAATCTATATGGGAAGATGTGCAGAAGCCCCTACTTTTCGGAGGCCAAGGCAGTAGGATTCTTGTCACTACACGTAGTGAGAAGGTTGCTGTTACCATGCGATCAGAAAAGCACCTCCTGCAGGTATTAAGGAAAGATTATTGCTGGGACTTGTTCGCAAAACATGCATTCCAAAGTGTTAATCCTCAACCGGATCCAGAGTTCATGGAGATTGGTAAGAAGATAGTTGAAAAATGTAATGGGCTTCCTTTAGCCTTGAAAACAATGGGAAGTCTACTAAACAGTAAATCATCCTTTTGGGAATGGGAAAGCATTATGAAAAGTGAGATATGGGATTTTTCAGAAAATGAAAGTGATATACTCCCTGCTTTAAGACTGAGTTATCACCACCTTCCTTCTCATCTCAAGAAATGCTTTGCTTTTTGTGCCTTGTTTCCAAAAGGTTATAAGTTTGATAAGGAGTGTTTAATTCAACTGTGGATGGCTGAGAATTTTCTAGAAAGCCCTCTACAGAAAAGGAGTCCTACAGAAGTTGGAGAACAGTATTTCAATGATCTGTTATCTTGGTCCTTCTTTCAACAATCAGGAAATGGAAAAGAAAAGCATTTTATCATGCATGACCTTCTAAATGATTTGGCAAAATTCGTTTGTGAGGACATCTGCATCAGGTTAGGAGTTGATGAACCAAAAGGTATACCCAAGACAAGCCGTCATTTTTCATTTCATACCAATGGTGTTACACGTTTTGATGGGTTTGGAAGTTTAATTGATACTCAAAAGTTGCATACATTTATGCCAACTGACAGGAGAATGAATAATCCTTTTTCTGGCATTTGGTATTGTAAGATGTCGATAGATGACTTGTTTTCCAAATTTAAGTTCATACGCTTCTTATCTTTGTCTGATTGTCGTAACCTTAGAGAGGTGCCTAAATCTGTAGGAAATCTTAAGCATCTCCGTTCATTAGATCTCTCTTCTACTAAAATAAGAAAACTACCTGACTCCATAAGTTTACTCTACAAGTTGCAAATCTTGAAGTTGAACTATTGTCGAAAATTGAAGGAGCTTCCCTCATATTTGCATCAACTGGACAATTTGCGATGCCTTGAATTTATAAATACTGGAGTGAAAAATGTGCCAGCACATTTGGGAAGGCTGAAGAATCTCCAAATATTCATGAGTTCGTTTTCAGTTGAAAAATGTAAGGAATTCAGTATTCAGAAATTGGGAGAACTCAATCTTCATGGAAGCCTAACATTTCATGAGCTGCAAAATATAGAGAATCCCTCTTATGCATTAGAAGCAGATTTGAAGAACAAACCACACCTTACGGAGCTACAGTTAGAATGGAATATTATGGGCAACTCCTCTGTTGATTCAACCAAAGTTGGGGATGTAATTGAGAATCTACGACCTTCAAAGCACTTGAAGAAGTTATCAGTAAGGAACTATGTTGGTAAACAACTTCCAAATTGGTTACTCAATAATTCGTTACTGAATTTGGTGTCCTTAGAGTTGATGAATTGTATATGTTGCCAAGGTTTTCCTCCGCTTGGTCTTTTGCCATTTCTGAAGAAGCTGGGGATTTCAGGGTTTGATGAGATAGTGAGTATTGATGCTGATTTTCATGGGAATAACTCTTCTTCCTTTAAATCCCTTGAAACATTGATCTTCTCCAATATGAGGCAATGGGAAAAGTGGGAGTGTCAAGCTCTGACAGGTGCTTTTCCATGTCTACGAGAACTTTCCATAAAAGAATGTCCGAAGCTGAAAGGACAGCTGCCAGAGCAAGTTGCTCTTTTGAAAATACTAGAAATTGAAGACTGCCAAGAACTTGAGTCATCAATAACTTATGACTGTGTCTCTCTATGTACCTTTCCATTGGATTTCTTTCAAACACTCACGACCCTTCAACTCAGTGGGTTTGGTAATTTACAGATGATTTCACAAGGTCTCATCCATAATCATCTGGAGCATCTGCAAATAATTAGGTGCCATAAATTAGAATCATTGCCTGCAAACATGCATACGCTGCTTCCATATCTGAGGACGTTAAGGATAGAAGACTGTCCAAGACTTGAGTCGTTCCCCGAAGGAGAGAAACTGGACTGTCTCTATCAACTCTCATCCCTTCAATCACTGAAACTTTTTGACTGCCCCAACGTCCAACGCTTACCAGAGGAGGGTCTTCCCAAATCAATTTCATATCTTGATATAAGCGATTGTCCTTTGCTTAAACAGCGTTGCCAAAAAGGAGGCGAAGACTGGGAAAAGGTTGCTCACATTCAAAACCTATATATGTGTATGTATCTACGG 3177 0.3916 MAEIVTGALVSVVLERTIDTLASRFVHIFRGRKHKKKQLSHLKMKLLAIDVVAFDAEHKQFTDPRVRNWLLRAKDVVFDAEDLLDEIDYELSKSQVEAESHSATNKVWNSLKSSFLSFFENEIESRMEQVTEDLEDLATQSDFLGLKKASGVGVAPGSSSRLTYTSLPNESVMYGRDEDREFVFNLLTSDSHKNLSILSIVGMGGLGKTSLAQHVFNDPRIEGKFDIKAWISVPQEFDVLNVSRAILDTITGSTVHSIQQEVIQRTLKEKLTGKKFLLILDDVWNERQSIWEDVQKPLLFGGQGSRILVTTRSEKVAVTMRSEKHLLQVLRKDYCWDLFAKHAFQSVNPQPDPEFMEIGKKIVEKCNGLPLALKTMGSLLNSKSSFWEWESIMKSEIWDFSENESDILPALRLSYHHLPSHLKKCFAFCALFPKGYKFDKECLIQLWMAENFLESPLQKRSPTEVGEQYFNDLLSWSFFQQSGNGKEKHFIMHDLLNDLAKFVCEDICIRLGVDEPKGIPKTSRHFSFHTNGVTRFDGFGSLIDTQKLHTFMPTDRRMNNPFSGIWYCKMSIDDLFSKFKFIRFLSLSDCRNLREVPKSVGNLKHLRSLDLSSTKIRKLPDSISLLYKLQILKLNYCRKLKELPSYLHQLDNLRCLEFINTGVKNVPAHLGRLKNLQIFMSSFSVEKCKEFSIQKLGELNLHGSLTFHELQNIENPSYALEADLKNKPHLTELQLEWNIMGNSSVDSTKVGDVIENLRPSKHLKKLSVRNYVGKQLPNWLLNNSLLNLVSLELMNCICCQGFPPLGLLPFLKKLGISGFDEIVSIDADFHGNNSSSFKSLETLIFSNMRQWEKWECQALTGAFPCLRELSIKECPKLKGQLPEQVALLKILEIEDCQELESSITYDCVSLCTFPLDFFQTLTTLQLSGFGNLQMISQGLIHNHLEHLQIIRCHKLESLPANMHTLLPYLRTLRIEDCPRLESFPEGEKLDCLYQLSSLQSLKLFDCPNVQRLPEEGLPKSISYLDISDCPLLKQRCQKGGEDWEKVAHIQNLYMCMYLR 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2070 1059 Gene3D - 330 419 IPR042197 -
Pvu11g2070 1059 Pfam Rx N-terminal domain 10 101 IPR041118 -
Pvu11g2070 1059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 429 IPR027417 -
Pvu11g2070 1059 Gene3D - 420 501 IPR036388 -
Pvu11g2070 1059 PANTHER DISEASE RESISTANCE PROTEIN RP 22 961 IPR044974 GO:0006952
Pvu11g2070 1059 PANTHER OS05G0414200 PROTEIN 22 961 - -
Pvu11g2070 1059 Pfam NB-ARC domain 183 394 IPR002182 GO:0043531
Pvu11g2070 1059 PRINTS Disease resistance protein signature 197 212 - -
Pvu11g2070 1059 PRINTS Disease resistance protein signature 270 284 - -
Pvu11g2070 1059 PRINTS Disease resistance protein signature 366 380 - -
Pvu11g2070 1059 PRINTS Disease resistance protein signature 601 617 - -
Pvu11g2070 1059 Coils Coil 120 140 - -
Pvu11g2070 1059 ProSiteProfiles Leucine-rich repeat profile. 605 626 IPR001611 GO:0005515
Pvu11g2070 1059 Gene3D - 157 329 IPR027417 -
Pvu11g2070 1059 Gene3D Ribonuclease Inhibitor 909 1058 IPR032675 -
Pvu11g2070 1059 Gene3D Ribonuclease Inhibitor 521 908 IPR032675 -
Pvu11g2070 1059 SUPERFAMILY RNI-like 833 1053 - -
Pvu11g2070 1059 Gene3D - 10 137 - -
Pvu11g2070 1059 SUPERFAMILY L domain-like 492 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2070 Pvu-Chr11 47645296 47648762 Dispersed/Wgd