Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2067 ATGGTCTTATCTTCTTTCTGCTGCTCTGCACAATCACTGCTTGCCCGTGTGGCTATCATTATTGTGCTATTCCGGCAAATTCACGGTGCCAAGGATAGTCCATTCTGTGCTCCTTCTTCGTGTGGCAAAATTGGCAACATAAGTTATCCTTTCCGACTCAAAGGAGACCCACCTGGTTGCGGCCTCCCAAGGTACGAATTAGATTGCGTAAAGAATGTGACAGTCTTCACTTTGTTTTCAGGGAAATACCATGTTCAGAATATCAACTACCAAACATACAGCATCCAATTGACTGATGCAGGTGTTGAGGAGGACACTGCTTGCGCCATTCCTCGCTATTTCATCTCTTTAAGTAACTTCACTGACATTGGTGGTTCTGAAAATTACACCCCCGATCCACTAACTTTGGAGAATTGGACTTTGTATCGTTTTACGCCTCCTCCGTATGTAGCGTTTCTAAACTGTAGTGATGGAGTGAGTGATGATCCTCGATACGTGGAAGTGAATGGCAGACTTTGTGATTCTGGAGGCCATGTCTATGCTGTTCTTTCTTCTTCTACTAAATTCACAATGATGGATATCAAGGTTGGGTGCCATTTAAAGGCTGCTACCTTTACAAACAATAACCATTGCAACCACGTTTCCTATGCTGATATCCATGAGTGCCTGCATAATGGGTTTTCGTTGTATTGGCTACCAGTTATTTGTACAGACCAATGTGGAAAGGGTGTAGGATGCTTTGTCAGTCCAACCACTCATCAAATTGTATGTCTACAAGATTCCTGCCAAGTTTTGGGCAAATTATTTGCTAGCAAGTGCGGAATTCAACACCAGATTCTTCGATATACAGTTGGAATTCTATACTATATAGCACGACTAATCTACGCAATAACACGTTCACCTAAGTATTGGGAATGGGAAGGAAATTTCATTTTATTAGCCCCTATTCCAATATTTGTGGCTTCAAGATTTCTATTTGGAGTGGCACTTTTGCTTGCAATATTTATCCATAGGTGGCGACGTAGGCATTACTCAATGTATGAAAACATTGAAACTTTTTTGCTAAACAACAATCTAAATCCTATTAGGTACGGATACAGAGAAATTAAGAAAATGAGCAGAGGTTACAAAGTTAAATTGGGTGAAGGAGGTTTCGGATCTGTATACAAAGGAAAACTTCGAAGTGGGTCAGAAGTAGCAATAAAGATGTTGAAAAAATCGAAAGCTGATGGACAAGAGTTTATGAATGAAGTGGCTAGCATTGGAAGAATACATCATGTGAATGTGGTACATCTCATTGGATATTGTGCTGAAGGACAAAAGCGTGCTCTAGTTTATGACTACATGCCAAATGGTTCATTGGATAAATACATCTTCTCCAAAGAGGAAAGTATCCCTTTAAGTTATGAGAAAACATATGAAATATCTCTTGGCATAGCTCGTGGGATTGCATATCTTCATCAAGGCTGTGATGTGCAAATTCTACATTTTGATATTAAGCCTCATAATATTCTTCTAGATGATGACTTCATTCCAAAGGTTTCAGATTTTGGACTTGCAAAGCTATATCCTGTAGAAGATACATCTATTGCTTTAACTGTGGCTAGAGGAACTTTAGGTTACATGGCTCCAGAACTATTCTACAATAATATTGGTGGAGTATCCAATAAGGCCGATGTGTATAGTTTTGGAATGCTTTTGATGGAAATGGGAAGTAGGAGAAGGAACTCAAATCCTCATGCAGAACATTCGAGCCAACAGTATTTTCCCTTTTGGATATATGATCAAATTAAAGAAGAAAAAGATACTTATATAGAAGATGCCTCAGAAGAGGATAAGATTTTGGTGAAAAAAATGTATGTAATTGCGCTTTGGTGTATACAATTGAAACCAAATGAGCGTCCTTCAATGAAGAGAGTTGTGGAGATGCTTGAAGAAAAAGTTGGAAGTCTTGAAACGCCTCCTACGCCTGTTTATTATCCCCATGAAACAGTTGAACATAACTGTGGAGACCACTCAAACCAAACATCATGGATTCTAGAGAAAATCTTGGCAAAACCAACACTAACATCCGTGGGAGAGCAACGCTTTGACGAACAAGAAAATCCCTTAGAGGATAAAACGCGAAAAATTTCAGCGCAATACGGACGAACAAAAAAAATTGCAAAAAACAACTCAAACCAAACATCATGGAGTGGTTCAACTAGTTCTAGCGAAAATCTTGGCAAAACCAACACTAACATCCGAAGGAGAGCAACGATTTGA 2265 0.3921 MVLSSFCCSAQSLLARVAIIIVLFRQIHGAKDSPFCAPSSCGKIGNISYPFRLKGDPPGCGLPRYELDCVKNVTVFTLFSGKYHVQNINYQTYSIQLTDAGVEEDTACAIPRYFISLSNFTDIGGSENYTPDPLTLENWTLYRFTPPPYVAFLNCSDGVSDDPRYVEVNGRLCDSGGHVYAVLSSSTKFTMMDIKVGCHLKAATFTNNNHCNHVSYADIHECLHNGFSLYWLPVICTDQCGKGVGCFVSPTTHQIVCLQDSCQVLGKLFASKCGIQHQILRYTVGILYYIARLIYAITRSPKYWEWEGNFILLAPIPIFVASRFLFGVALLLAIFIHRWRRRHYSMYENIETFLLNNNLNPIRYGYREIKKMSRGYKVKLGEGGFGSVYKGKLRSGSEVAIKMLKKSKADGQEFMNEVASIGRIHHVNVVHLIGYCAEGQKRALVYDYMPNGSLDKYIFSKEESIPLSYEKTYEISLGIARGIAYLHQGCDVQILHFDIKPHNILLDDDFIPKVSDFGLAKLYPVEDTSIALTVARGTLGYMAPELFYNNIGGVSNKADVYSFGMLLMEMGSRRRNSNPHAEHSSQQYFPFWIYDQIKEEKDTYIEDASEEDKILVKKMYVIALWCIQLKPNERPSMKRVVEMLEEKVGSLETPPTPVYYPHETVEHNCGDHSNQTSWILEKILAKPTLTSVGEQRFDEQENPLEDKTRKISAQYGRTKKIAKNNSNQTSWSGSTSSSENLGKTNTNIRRRATI* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2067 754 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Pvu11g2067 754 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 4 676 - -
Pvu11g2067 754 MobiDBLite consensus disorder prediction 715 754 - -
Pvu11g2067 754 SUPERFAMILY Protein kinase-like (PK-like) 362 645 IPR011009 -
Pvu11g2067 754 MobiDBLite consensus disorder prediction 718 754 - -
Pvu11g2067 754 SMART serkin_6 376 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g2067 754 Gene3D Transferase(Phosphotransferase) domain 1 449 653 - -
Pvu11g2067 754 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 676 IPR045874 GO:0004672
Pvu11g2067 754 Pfam Protein kinase domain 378 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g2067 754 CDD STKc_IRAK 380 646 - -
Pvu11g2067 754 Gene3D Phosphorylase Kinase; domain 1 352 448 - -
Pvu11g2067 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Pvu11g2067 754 Pfam Wall-associated receptor kinase galacturonan-binding 36 99 IPR025287 GO:0030247
Pvu11g2067 754 ProSiteProfiles Protein kinase domain profile. 374 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2067 Pvu-Chr11 47578343 47583306 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2067 328 677 Receptor kinase-like Gene Family AT4G18250 44.444 1.89e-98 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu11g2067 Pkinase 7e-48 CL0016