Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2066 ATGCCAGTGATAGAAACACTTGGTGGTGCTCTTTTCGGTGCTGTTCTTCAGGTGCTATTTGACAGGCTTGATTCTCGTCAAGTTGTTGACTACTTTCTTGGAAGAAAGCTCGATGTGAAGCTGCTGAAGAAGTTGAAGAGGAAGCTGGTTTCCGTTTATGCTGTGGTTGATGATGCAGAACAGAAGCAGTTCAGAGATACGTATGTGAAGGCATGGCTTGATGAGGTCAGAGACGTGTTGCTTGATACAGAGGATCTGATGGATGAAATAGAGTATGAATTCTCCAGATCTGAGTTGGAAGTTCAATCCCAGAGCAGTTCTAGCAAGGTATGCAGTTTTGAATCCAAGATTGTAGAAGTCCTTGATGACCTTGAATCTCTTCTAAGCCAAAAAGATGATCTAGGTTTGAAAAATGCTAGCGGGGCAGGGGTTGGGTTAGGGTTGAGTAGTAATGTGTCGCAGAAATTGCCATCAACATCTTTGGTGGTTGAAAATGTTATTTATGGAAGAGATGATGAAAAAGAAATGATCCTCAAATGGATGACTTCTGACACTGAAGAGCATAGCCAACTATCAATACTTTCTGTTGTGGGTATGGGTGGGATGGGTAAGACCACACTTGCTCAACATGTGTACAATGACCCAATGATAGAGGGTAAATTTGCTATCAAAGGTTGGGTTTGTGTTTCGGATGAATTTGATGTTTTTATGGTAACAAAAGCAATTGTTGGGGCAATCACTAAATCAAAAGATGATAGTGTAGACCTAGAAATGGTTCAGGGACGATTGAAAGAAAAGTTAACGGGAAGGAAGTTTCTCCTCGTTCTTGATGATGTCTGGAACGAGCACCAAGACCAGTGGAAATCATTGCAAACTCCTTTTAAATATGGGGCTAAGGGAAGTAAAATTATTATCACAACACGTAGTAACAAAGTTGCTTCTATCATGGAGTCAAACAAGATTCGCCAACTAAAGCAATTACAAGAAGATCACAGCTGGCAAGTTTTTGCTAAACATGCATTCCAAAATGATAACTCTAAGCCTAATTCCGAGTTGAAGGAGATTGGCACGAAGATAGTTGAAAAGTGCCAAGGACTGCCTCTGGCCCTTGAAACGGTAGGATCTCTTTTACGGTCAAAGTCATCTGTTTCAGAGTGGGAAAGTGTTCTGAGAAGTAACATATGGAACTTACGAATTGAAGATAGTAAAATTCTCCCTGCTTTGTTGTTGAGCTATTACCATCTTCCTTCTCATCTCAAGACATGTTTCGCTTATTGTGCGTTATTCCCCAAAGACCATAAGTTTGAGAAGGAGAGCTTAATTCTCTCATGGATGGTTCAAAATTTCTTACAATGTTCTCAGCAGAGTGATTCTCTAGAAGAAATAGGTGAACAGTACTTCAATGATCTATTATCAAGGTCATTCTTTCAGCAGTCAAATTGGTTCGGCAAAACACGTTTTCTGATGCACGACCTTCTGAATGATTTAGCAAAATATGTTTCTGGTGATATCTACTACAGGTTGGGTGTTGATAGACCAGGAAGCGTACCAAAGACAACCCGTCACTTTTCAACTAAAGAGAAGGATCCTGTTGAATGTGATGAGTATAGGAGTTTATGTGATGCTAAAAGGCTACGAACATTTTTGTCCATATCTACGAATTGTGGGATGTCAATAAAAGAGTTGATATCCAACTTTAAGTTTTTACGACACTTATCTTTGTCTTGCTGTCGTAACATAAAAGAGATGCCTGACACTATAACTGATCTCATACATCTCCGTTCATTAGACCTTTCTGGTACCTCTATAGAGAGACTTCCCGACTCAATGTGTTCACTTTGTAACTTGCAAGTGTTGAAGCTGAACTACTGTAGGTTATTGAAGGAGTTGCCCTCGACTTTGCATGAGCTCTCTAAGTTGCGCCTCCTTGAACTTAAGGGAACTACTTTAAGAAAGGCTCCAGTGCTTTTAGGAAAGTTGAAGAATCTTCAAGTATGGATGGGTGGGTTTGAGGTTGGAAAAAGTAGTAGTGAGTTCAGTATTCAAGAACTAGGACAACTTGATCTTCACGGAAAACTGTCAATTGAAAATCTTGAAAATATCGTGAATCCCTGTGATGCATTGGCAGCTGATTTGAAGAATAAAACACATCTTGTGATGTTAGTTTTAAAATGGAATTTGAAGCGGAACAATGAGGATTCAATAAAACAAAGAGAAGTACTAGAGAATCTGGAACCTTCCAGACATTTGGAGTTCTTGTCAATCAACGGCTATTGTGGCACACAATTTCCACGTTGGTTATCTGATACATTTGTGTTGAATGTGGTGTCCCTAAGTTTGTATAAATGTAAATATTGCCAATGGTTGCCTTCACTTGGACTTTTGACATCTCTCAAGGGCTTGGTAATTCGTCGCCTTGATGAGATAGTGAGGATAGATGCTGATTTTTACGGGAATACCTCTTCTGCTTTTGCATCCTTGGAAAGGTTGACCTTTATTGATATGAAGGAATGGGAAGAATGGCAATGCATGACGGGTGCTTTTCCAAGTCTTCAATTTCTTTCTTTGCAGAATTGTCCCAAACTGAAAGGGCACTTGCCAGATCTTCCTCATTTAAAGGATCTATTTATCACGCGTTGCAGACAACTTGTAGCTTCGACTCCCAGCGGGCTAGAAATTGAAGGTGTGGAGATGGAGACATCTTCATTTGATATGATAGGGCACCATCTAAAATCCTTGAGAATATCTATTTGTCCGGGCATGAATATTCCCATAAACCACTGCTACCATTTCCTTGTCAATTTGGAAATTTTTGAATGTTGTGACTCTCTCACGAAATTCCCTCTAGACCTATTCCCAAAACTCCACAAGCTTAATTTAAGTAACTGTCGTAACCTACAGATAATGTCACAGGAGCACCCTCATCATCATTTGAAGAGTCTGTCAATTTATCACTGCTCTGAATTTGAATCATTTCCAAATGAAGGATTACTTGCACCTCAAATACAAAGAATTTTTATTACAAAAACGGAGAAATTGAAATCAATGCCTAAACGCATGTCTGACCTCCTTCCATCTCTTGCTTATCTGTTCATACGTGATTGTCCAGGAGTGGAGTTGTCTGAGGGATGTTTGCCATCAAATATAAAAGAAATGCGTCTCTTGAATTGCTCCAAACTTGTTGCCTCTCTAAAGAAGGGTGGTTGGGGAACCAACCCTTCCATACAACTTTTGTCTATTAATGAAGTGGATGGGGAGTGTTTTCCAGATGAAGGTTTTCTCCCACTCTCTATTACTCAGCTAGACGTAAAGGATTGTCCAAAACTTAAGAAACTGGACTACAGGGGTCTCTGTCACCTCTCCTCTCTTCAGATATTGTTTATTGAAAATTGTCCAATACTCCAATGTTTGCCAGAGGAGGGTTTACCCGAATCCATTTCAGAACTCAGAATTGAAAGTTGCCCGTTGCTCAAACAGCAGTGCAAGAAAGAAGAAGGCGAAGACTGGATAAAGATTGCTCACATTAAAGCTATATGGGTTGATTGGAAACCAGTAAACATATAA 3564 0.3981 MPVIETLGGALFGAVLQVLFDRLDSRQVVDYFLGRKLDVKLLKKLKRKLVSVYAVVDDAEQKQFRDTYVKAWLDEVRDVLLDTEDLMDEIEYEFSRSELEVQSQSSSSKVCSFESKIVEVLDDLESLLSQKDDLGLKNASGAGVGLGLSSNVSQKLPSTSLVVENVIYGRDDEKEMILKWMTSDTEEHSQLSILSVVGMGGMGKTTLAQHVYNDPMIEGKFAIKGWVCVSDEFDVFMVTKAIVGAITKSKDDSVDLEMVQGRLKEKLTGRKFLLVLDDVWNEHQDQWKSLQTPFKYGAKGSKIIITTRSNKVASIMESNKIRQLKQLQEDHSWQVFAKHAFQNDNSKPNSELKEIGTKIVEKCQGLPLALETVGSLLRSKSSVSEWESVLRSNIWNLRIEDSKILPALLLSYYHLPSHLKTCFAYCALFPKDHKFEKESLILSWMVQNFLQCSQQSDSLEEIGEQYFNDLLSRSFFQQSNWFGKTRFLMHDLLNDLAKYVSGDIYYRLGVDRPGSVPKTTRHFSTKEKDPVECDEYRSLCDAKRLRTFLSISTNCGMSIKELISNFKFLRHLSLSCCRNIKEMPDTITDLIHLRSLDLSGTSIERLPDSMCSLCNLQVLKLNYCRLLKELPSTLHELSKLRLLELKGTTLRKAPVLLGKLKNLQVWMGGFEVGKSSSEFSIQELGQLDLHGKLSIENLENIVNPCDALAADLKNKTHLVMLVLKWNLKRNNEDSIKQREVLENLEPSRHLEFLSINGYCGTQFPRWLSDTFVLNVVSLSLYKCKYCQWLPSLGLLTSLKGLVIRRLDEIVRIDADFYGNTSSAFASLERLTFIDMKEWEEWQCMTGAFPSLQFLSLQNCPKLKGHLPDLPHLKDLFITRCRQLVASTPSGLEIEGVEMETSSFDMIGHHLKSLRISICPGMNIPINHCYHFLVNLEIFECCDSLTKFPLDLFPKLHKLNLSNCRNLQIMSQEHPHHHLKSLSIYHCSEFESFPNEGLLAPQIQRIFITKTEKLKSMPKRMSDLLPSLAYLFIRDCPGVELSEGCLPSNIKEMRLLNCSKLVASLKKGGWGTNPSIQLLSINEVDGECFPDEGFLPLSITQLDVKDCPKLKKLDYRGLCHLSSLQILFIENCPILQCLPEEGLPESISELRIESCPLLKQQCKKEEGEDWIKIAHIKAIWVDWKPVNI* 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2066 1187 SUPERFAMILY L domain-like 489 880 - -
Pvu11g2066 1187 PRINTS Disease resistance protein signature 193 208 - -
Pvu11g2066 1187 PRINTS Disease resistance protein signature 266 280 - -
Pvu11g2066 1187 PRINTS Disease resistance protein signature 363 377 - -
Pvu11g2066 1187 PRINTS Disease resistance protein signature 950 966 - -
Pvu11g2066 1187 Gene3D Ribonuclease Inhibitor 903 1178 IPR032675 -
Pvu11g2066 1187 Gene3D - 326 410 IPR042197 -
Pvu11g2066 1187 Pfam NB-ARC domain 172 391 IPR002182 GO:0043531
Pvu11g2066 1187 Pfam Leucine rich repeat 569 626 IPR001611 GO:0005515
Pvu11g2066 1187 PANTHER DISEASE RESISTANCE PROTEIN RP 27 997 IPR044974 GO:0006952
Pvu11g2066 1187 Gene3D - 17 128 - -
Pvu11g2066 1187 Gene3D Ribonuclease Inhibitor 531 902 IPR032675 -
Pvu11g2066 1187 PANTHER OS05G0414200 PROTEIN 27 997 - -
Pvu11g2066 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 426 IPR027417 -
Pvu11g2066 1187 Pfam Rx N-terminal domain 13 104 IPR041118 -
Pvu11g2066 1187 Coils Coil 42 62 - -
Pvu11g2066 1187 Gene3D - 149 323 IPR027417 -
Pvu11g2066 1187 Gene3D - 411 499 IPR036388 -
Pvu11g2066 1187 SUPERFAMILY L domain-like 907 1173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2066 Pvu-Chr11 47554654 47559162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2066 194 387 WRKY Transcription Factor Family AT5G45050 28.502 5.97e-10 62.0