Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2061 ATGGCAGAAATTGTTACCGGTACTCTTGTTTCTGTTTTCCTCGAGAGGACTACAGACACTTTGGCTTCCCGTTTTGTCCACATGTTTCGTGCAAGAAAAGACAAAAAAGAGCAACTTAGCAACTTGAAGATGAAGCTCCTGGCCATTGATGTTGTGGCTTTTGATGCCGAGCAAAAGCAGTTCACAGATCCACTTGTGAGAGAATGGCTTCTCAGGGCCAAAGATGTTGTGTTTGATGCAGAAGATCTCTTGTATGAAATGGAGTATGAACTCCCCAAAAGCCAAGTGGAAGCTGAGTCTCAGAGTGCTACTGTGAAGGTGTGGAATTCCCTCAAATCTTCCTTTTTCACTTCCTCTGAAAATGAACTTGAATCAAAGATGGAACAAGTCATTAGAACACTAAAATATCTTGAAACCCAAAGCGGTTATCTAGGTTTAAAAAAGACTAGTGGTGTTGGGATTGGATCAGGATCGAGTAGTAGATTAACATATACATCTTTGCCAAATGAAAGTGCTATTTATGGAAGAGATGATGACAAAGAATTTGTCTTTCGCTGGCTCAAATCTGAGACTCAAGACAACCTTTCTATACTTTCTATTGTGGGCATGGGTGGGTTGGGTAAGACCTCACTTGTCCAACATGTATTCAATGACCCAAGGATTGAAGGTAAATTTGATATTAAAGCTTGGATCAGTGTTCCGATGGAATTTGATGTTCTCAATGTATCAAGAGCAATTCTTGACACAATTAATGGTTCAACTGAACATAGTATACAGAAGGAAGTGGTCCAGGAAGTGGTTCAGAGAAGACTGAAAGAAAAATTGACGGGGAAGAAATTTCTTCTTGTTTTGGATGACAATTGGAACGAAAACCAATCTAAATGGGAGCAAGTGCAGAAAGCTCTTGGTTTTGGGGCCCAAGGAAGTAGGATTCTTGTCACTACACGAAGTGAGAAGGTTGCTTTTACCATGCGATCAGAAAAACACCATTTGAAGGTATTAAAAGAAGATTATTGCTGGGCCTTGTTCGCAAAACATGCATTCCAAAGTGCTAGTCCTCAACCGGATCCAAACTTCATGGAGATTGGTAAGAAGATGGTAGAAAAATGTAATGGGCTTCCTTTAGCCTTGAAAACAATGGGAAGTCTATTACACAATAAATCATCCTTTTGGGAATGGGAAAACATTATGAAAAGTGAGATATGGGATTTTTCAGAAAATGAAAGTAATGTTCTCCCTGCTTTAAGACTGAGTTATCACCACCTTCCTTCTCATCTGAAGAAATGCTTTGCTTTTTGTGCGGTGTTTCCCAAAGGTTATGAGTTTGACAAGGCATGTTTAATTCAACTGTGGTTGGCTGAAAATTTTCTAGAAAGCCCTCTACAGAAAAGGAGTCCTAAAGAAGTTGGAGAACAGTATTTCAATGATCTGTTATCGTGGTCCTTCTTTCAACAATCCGGAAACGAAGAGGAAAAGCATTTTATCATGCATGACCTTCTAAATGATTTGGCAAAATTCGTTTGTGAGGACATTTGCATCAGATTAGGAGTTGATGAACCAAAAGGTATACCTAAGAAAAGCCGTCATTTTTCATTTCCAACCACTCGTGTATATTTTGATGGGTTTGGATGTTTGATTGATACTCAAAAGTTGCATACATTTATGCCAACTGACAGGAGAATGTATGATCCTTTTTGCTACTATTGTTTCAGTTGGTACTGTAACATGTCGCTAGAGGACTTGTTCTCCAAATTTAAGTTCTTACGTGTCTTGTCTTTGTCTCACTGTTGTGACCTTACAGAGGTACCTAAATCTATAGGAAATCTTAAGCATCTCCGTTCATTAGATCTTTCTGCCACTGACATTGAAAAACTACCTGACTCCATAAGTTTACTTTACAAGTTGCAAATACTGAAGCTGAACAACTGTACAAAATTAAAGGAGCTTCCCTCATGTTTACATCAACTCGACAATTTGCATTCCCTTGAATTTATAAATAGTGGAGTGAAAAATGTGCCAGCACATTTGGGAAAGCTGAAGAATCTCCAAGTATTGATGAGTGCGTTTTACGTTCAGAAAAGTAAAGAATTCAGTATTCAACAATTAGGAGAACTCAATCTTCATGGAAGTCTGACAATGCATGAGCTGCAGAATATTGAAAATCCCTCTTATGCATTAGAAGCAGATTTGAAGAACAAACCAGACCTTGTGGAGCTACAGTTAGAATGGAATGATATGATGGGCAGCTCTTCTGTTGATTCAACCAAAGCTGGGGATGTAATTGAAAATCTACGACCTTCAAAACACTTAAAGAAGTTATCATTAAGGAACTATGTTGGTAAAAAACTTCCAAATTGGTTACTCGATAATTCGTTACTGAATCTGGTGTCCTTAGTGTTGATGAATTGTACGTGTTGCCAACGTTTTCCTCCGCTCGGGCTTTTGCCATTTCTGAAGGAGCTGAAGATTGTTGGGTTTGATGAGATAGTGAGAATAGATGGTGATTTTCATGGGAACAACTCTTGTTCATTTAAATCTCTTGAAACATTGGAGTTCTCCAATATGAGTCAATGGGAAAAGTGGGAGTATGAAACTCTGGCAGGTGGTTTTCCATATCTACAAGAGCTTTCCATAAGAAAATGTCCGAAACTGAAAGGAGAGCTGCCAGAGCAAGTTGTTCCTTTGGAAAGACTACAAATTGAAAACTGCCAAGAACTCGAGGCTTCTGCTCCCCGGGCTCTAGGTTTAAGTCTACATGAGTGTGGAAAGCTACATGTGGAGTGGGCTACA 2790 0.3907 MAEIVTGTLVSVFLERTTDTLASRFVHMFRARKDKKEQLSNLKMKLLAIDVVAFDAEQKQFTDPLVREWLLRAKDVVFDAEDLLYEMEYELPKSQVEAESQSATVKVWNSLKSSFFTSSENELESKMEQVIRTLKYLETQSGYLGLKKTSGVGIGSGSSSRLTYTSLPNESAIYGRDDDKEFVFRWLKSETQDNLSILSIVGMGGLGKTSLVQHVFNDPRIEGKFDIKAWISVPMEFDVLNVSRAILDTINGSTEHSIQKEVVQEVVQRRLKEKLTGKKFLLVLDDNWNENQSKWEQVQKALGFGAQGSRILVTTRSEKVAFTMRSEKHHLKVLKEDYCWALFAKHAFQSASPQPDPNFMEIGKKMVEKCNGLPLALKTMGSLLHNKSSFWEWENIMKSEIWDFSENESNVLPALRLSYHHLPSHLKKCFAFCAVFPKGYEFDKACLIQLWLAENFLESPLQKRSPKEVGEQYFNDLLSWSFFQQSGNEEEKHFIMHDLLNDLAKFVCEDICIRLGVDEPKGIPKKSRHFSFPTTRVYFDGFGCLIDTQKLHTFMPTDRRMYDPFCYYCFSWYCNMSLEDLFSKFKFLRVLSLSHCCDLTEVPKSIGNLKHLRSLDLSATDIEKLPDSISLLYKLQILKLNNCTKLKELPSCLHQLDNLHSLEFINSGVKNVPAHLGKLKNLQVLMSAFYVQKSKEFSIQQLGELNLHGSLTMHELQNIENPSYALEADLKNKPDLVELQLEWNDMMGSSSVDSTKAGDVIENLRPSKHLKKLSLRNYVGKKLPNWLLDNSLLNLVSLVLMNCTCCQRFPPLGLLPFLKELKIVGFDEIVRIDGDFHGNNSCSFKSLETLEFSNMSQWEKWEYETLAGGFPYLQELSIRKCPKLKGELPEQVVPLERLQIENCQELEASAPRALGLSLHECGKLHVEWAT 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2061 930 Gene3D - 334 423 IPR042197 -
Pvu11g2061 930 PANTHER OS05G0414200 PROTEIN 20 891 - -
Pvu11g2061 930 Gene3D - 10 131 - -
Pvu11g2061 930 ProSiteProfiles Leucine-rich repeat profile. 611 632 IPR001611 GO:0005515
Pvu11g2061 930 SUPERFAMILY L domain-like 496 903 - -
Pvu11g2061 930 PRINTS Disease resistance protein signature 197 212 - -
Pvu11g2061 930 PRINTS Disease resistance protein signature 274 288 - -
Pvu11g2061 930 PRINTS Disease resistance protein signature 370 384 - -
Pvu11g2061 930 PRINTS Disease resistance protein signature 583 599 - -
Pvu11g2061 930 Gene3D Ribonuclease Inhibitor 567 928 IPR032675 -
Pvu11g2061 930 Gene3D - 157 333 IPR027417 -
Pvu11g2061 930 Coils Coil 120 140 - -
Pvu11g2061 930 Gene3D - 424 505 IPR036388 -
Pvu11g2061 930 PANTHER DISEASE RESISTANCE PROTEIN RP 20 891 IPR044974 GO:0006952
Pvu11g2061 930 Pfam Rx N-terminal domain 10 101 IPR041118 -
Pvu11g2061 930 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 433 IPR027417 -
Pvu11g2061 930 Pfam NB-ARC domain 177 419 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2061 Pvu-Chr11 47507265 47510054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2061 577 685 Receptor kinase-like Gene Family AT4G13920 36.607 5.26e-09 58.2