Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2059 ATGGCACTAGAAATGTTTACCGGTGCTCTTGTTTCTACTTTCGTCCAGAAGACCATTGACACTTTGGCTTCACGTTATGTCGACATATTTCGTGCAAGAAAGCGCAATAAGAAGCAACTCAGCGACTTGCAGATGAAGCTCCTATCCATTGATGTTGTGGCTTTTGATGCAGAACAAAAGCAGTTCACAGATCCACGTGTGAGAGATTGGCTTCTCAGAGCCAAAGATGTTGTGTTTGATGCAGAAGATCTCTTGGAGGAAATAGATTATGAACTCTTCAAAACTCAAGTGGAAGCTGAGTCTCAGAGTGCTACTAACAAGGTGTGGAATTCCCTCAAATCTTCTTTTGTCACTTTCTTTGAAAATGAAATTGAATCCAGGATGGAACAAGTCATTGAGGACCTAGAAGATCTTGCTACCCAAAGCGATCTTCTAGGTTTGAAAAAGGCTAGTGGTGTTGGGTTTGGATCAGGATCGAGTAGTAGATTAACATATACATCTTTACCAAATGAAAGTGTTATTTATGGCAGAGATGAAGACAGAGAATTTGTCTTTAACTGGCTCACATCTGACACTCACAACAACCTATCTATACTTTCTATTGTGGGTATGGGTGGGTTGGGTAAGACCTCACTTGCCCAACATGTATTCAATGACCCAAGGATTGAAGGTAAATTTGATATTAAAGCTTGGGTCAGTGTTCTACAGGAATTTGATGTTCTCAATGTATCAAGAGCAATTCTTGACACAATTACTGGTTCAACTGAGCTTAGTATACAGCAGGAAGTGGTTCAGAGAAAACTGAAAGAAAAATTGACGGGGAAGAAATTTCTTCTTGTTTTGCATGACAATTGGAACGAAAACCAATCTAAATGGGAACAAGTGCAGAAAGCTCTTGGTTTTGGGGCCCAAGGAAGTAGGCTTCTTGTGACGACACGCAGTCAGAATGTTGCTATTGCCATGCGATCTGAAAAGCATCTACTGGAGGTGTTAAGAAAAGATTATTGCTGGGACTTGTTCGCAAAACATGCATTCCAAAGTGTTAATCCTCAACCGGATCCAGAGTTCATGGAGATTGGTAAGAAGATAGTTGAAAAATGTAATGGGCTTCCTTTAGCGTTAAAAACAATGGGAAGTTTATTACACAATAAATCATCCTTTTGGGAATGGGAAAGCATTATGAAAAGTGAGATATGGGATTTTTCAGAAAATGAAAGTGATATACTCCCTGCTTTAAGATTGAGTTATCTCCACCTTCCTTCTCATCTGAAGAAATGTTTTGCTTTTTGTGCCTTATTTCCCAAAGGTTTCAAGATTGACAAGGAATGTTTAATTCAACTGTGGTTGGCTGAAAATTTTCTAGAATGCCCTCTACAGAGGAGGAGTCCTAAAGAAGTTGGAGAACATTATTTCAATGATCTGTTATCTTGGTCCTTCTTTCAAGAATCTGGAAAAGAAGAGCCAAAGCATTTTATCATGCATGACCTTCTTAATGATTTGGCAAAATTCGTTTGTGAGGACATCTGCATCAGGTTAGGAGTTGATGAACCAAAAGGTATACCCAAGACAAGCCGTCATTTTTCATTTCCAACCATTGGTATTGTCCATTTTGATGGGTTTGGAAGTTTGGTTGATACTCAAAAGTTGCATACATTTATGCAAACTGACAGGAGAATGTATAATTCTTTTTTTTGCCTTTGGCATTGTAAATTGTCGATAGATGACTTGTTCTCCAAATTTAAGTTCATACGCGTCTTGTCTTTGTCTCATTGTGGTAACCTTACAGAGGTGCCTAAATCTATAGGAAATCTTAAGCATCTCCGTTCATTAGATCTCTCTTTTACTGACATAGAAAAACTACCTGACTCCATAAGTTTACTCTACAAGTTGCAAATACTGAAGCTGAACAATTGTCGAAGATTGATGGAGCTTGCCTCATATTTGCATCAACTGGACAATTTGCGATGCCTTGAATTTATAAATACTAAAGTGAAAATTGTGCCAGCAAATGTGGGAAAACTGAAGAATCTCCAAATATTGATGAGTTCATTTTACGTTGAGAAAAGTAAGGAATTCAATATTCAGCAATTAGGAGAACTCAATCTTAATGGAAGTCTAACAATTCATGAGCTGCAAAATATTGAGAATCCTTCTCATGCATTAGAGGGAGATTTGAAGAACAAACCACATCTTGTGGAGCTACAGTTAGAATGGAATATTAGGAGCAGCTCATCTGGGGATTCAACCAAAGCTGGGGATGTAATTGAGAATCTACGACCTTCAAAACACTTGAAGAAGTTATCAGTAAGGAACTATGTTGGTAAACAACTTCCAAATTGGCTACTTGATAATTTGTTACTGAATCTGGTGTCCTTAGCGTTGATGAATTGTAAACGTTGCCAACGTTTTCCTCCGCTTGGTCTTTTGCCATTTCTGAAGAAGTTGGAGATTTCAGGGTTTGATGAGATAGTGAGAATTGATTGTGATTTTCATGGGAACAACTCTTCTTCATTTAAATCCCTTGAAACATTGATGTTCTCCTTTTTGAGGCAATGGGAAAAGTGGGAATGCCAAGCTCTGACAGGTGCTTTTCCATGTCTACGAGAGCTTTCCGTAAGAAATTGTCCGAAGCTGAAAGGACAGCTGCCAGAGCAAGTTGTTCATTTGGAAAGACTAGAAATTGATGAATGCCAAGAACTTGAGGGTTCCGCTCCCAAGGCTTTAGATTTAGAACTACATGACTGTGGAAAGCTGCAGTTGGAGTGGGCTACAGTGAGAAGGCTTACAATGGGTGGGCACAACACTCTTGATCACTTACGCGAGTCAATAAGTGATGACTATGTCTCGCGATGTACCTTTCCACTAGATTTCTTCCAAACAGTCACGACCCTTAAACTCAGTAGGTTTGGTAATTTACAGATGATTTCACAGGGTCTCATCCATACTCATCTGCAGCATCTGGAAATCATTAGGTGCCATAAATTAGAATCATTGCCAGCAAACATGCATATGCTGCTTCCATCTCTCAGGAGTTTATGTATAGAATATTGTCCAAGACTTGAGTTGTTCCCCGACTACGGAGGTTTCCCATCAAATCTAAAAAACCTGAAAATCAGAAAGTGTTCTAGACTTGTTGGCTCACTGAAAGGAGCTTTGGGAGACAATCCTTGTCTGGAGAGCTTGTGTATTGGAGAAGTGGATGCAGAATGTTTTCCTGAGGAAGGTTTGCTTCCACTCTCTCTTACTTCTCTAACCATCTTTGATTGTCAAAATGTAAAGAAACTGGACTACAAGGGTCTCTATCAACTCTCATCCCTTCGATCACTCACACTTTTTCACTGCTTAAACCTCCAACACTTACCGGAGGAGGGTCTTTCCAAATCAATTTCATATCTCGAAATACGCAATTGTCCTTTGCTGGAACAGCGTTACCAGAAAGAAGGAGGTGAAGACTGGAAAAAGATTGCTCACATTCAATACGTATTTATACTGAAGTAA 3498 0.3928 MALEMFTGALVSTFVQKTIDTLASRYVDIFRARKRNKKQLSDLQMKLLSIDVVAFDAEQKQFTDPRVRDWLLRAKDVVFDAEDLLEEIDYELFKTQVEAESQSATNKVWNSLKSSFVTFFENEIESRMEQVIEDLEDLATQSDLLGLKKASGVGFGSGSSSRLTYTSLPNESVIYGRDEDREFVFNWLTSDTHNNLSILSIVGMGGLGKTSLAQHVFNDPRIEGKFDIKAWVSVLQEFDVLNVSRAILDTITGSTELSIQQEVVQRKLKEKLTGKKFLLVLHDNWNENQSKWEQVQKALGFGAQGSRLLVTTRSQNVAIAMRSEKHLLEVLRKDYCWDLFAKHAFQSVNPQPDPEFMEIGKKIVEKCNGLPLALKTMGSLLHNKSSFWEWESIMKSEIWDFSENESDILPALRLSYLHLPSHLKKCFAFCALFPKGFKIDKECLIQLWLAENFLECPLQRRSPKEVGEHYFNDLLSWSFFQESGKEEPKHFIMHDLLNDLAKFVCEDICIRLGVDEPKGIPKTSRHFSFPTIGIVHFDGFGSLVDTQKLHTFMQTDRRMYNSFFCLWHCKLSIDDLFSKFKFIRVLSLSHCGNLTEVPKSIGNLKHLRSLDLSFTDIEKLPDSISLLYKLQILKLNNCRRLMELASYLHQLDNLRCLEFINTKVKIVPANVGKLKNLQILMSSFYVEKSKEFNIQQLGELNLNGSLTIHELQNIENPSHALEGDLKNKPHLVELQLEWNIRSSSSGDSTKAGDVIENLRPSKHLKKLSVRNYVGKQLPNWLLDNLLLNLVSLALMNCKRCQRFPPLGLLPFLKKLEISGFDEIVRIDCDFHGNNSSSFKSLETLMFSFLRQWEKWECQALTGAFPCLRELSVRNCPKLKGQLPEQVVHLERLEIDECQELEGSAPKALDLELHDCGKLQLEWATVRRLTMGGHNTLDHLRESISDDYVSRCTFPLDFFQTVTTLKLSRFGNLQMISQGLIHTHLQHLEIIRCHKLESLPANMHMLLPSLRSLCIEYCPRLELFPDYGGFPSNLKNLKIRKCSRLVGSLKGALGDNPCLESLCIGEVDAECFPEEGLLPLSLTSLTIFDCQNVKKLDYKGLYQLSSLRSLTLFHCLNLQHLPEEGLSKSISYLEIRNCPLLEQRYQKEGGEDWKKIAHIQYVFILK* 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2059 1165 Pfam NB-ARC domain 182 395 IPR002182 GO:0043531
Pvu11g2059 1165 PRINTS Disease resistance protein signature 198 213 - -
Pvu11g2059 1165 PRINTS Disease resistance protein signature 271 285 - -
Pvu11g2059 1165 PRINTS Disease resistance protein signature 367 381 - -
Pvu11g2059 1165 PRINTS Disease resistance protein signature 625 641 - -
Pvu11g2059 1165 Gene3D - 158 330 IPR027417 -
Pvu11g2059 1165 Gene3D Ribonuclease Inhibitor 948 1159 IPR032675 -
Pvu11g2059 1165 ProSiteProfiles Leucine-rich repeat profile. 606 627 IPR001611 GO:0005515
Pvu11g2059 1165 Pfam Rx N-terminal domain 10 102 IPR041118 -
Pvu11g2059 1165 PANTHER OS05G0414200 PROTEIN 17 1001 - -
Pvu11g2059 1165 Gene3D - 331 414 IPR042197 -
Pvu11g2059 1165 PANTHER DISEASE RESISTANCE PROTEIN RP 17 1001 IPR044974 GO:0006952
Pvu11g2059 1165 Gene3D Ribonuclease Inhibitor 560 919 IPR032675 -
Pvu11g2059 1165 Gene3D - 11 128 - -
Pvu11g2059 1165 SUPERFAMILY RNI-like 834 1141 - -
Pvu11g2059 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 430 IPR027417 -
Pvu11g2059 1165 SUPERFAMILY L domain-like 493 894 - -
Pvu11g2059 1165 Gene3D - 415 503 IPR036388 -
Pvu11g2059 1165 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2059 Pvu-Chr11 47486431 47490179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2059 573 821 Receptor kinase-like Gene Family AT4G13920 23.077 9.70e-09 57.8