Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2058 ATGGCACTAGAAATGGTTACCGGTGCTCTTATTTCTACTTTCGTCGAGAGGACTATTGACACTTTGGCTTCCCGTCTTGTCCACATATTCGGTGCAAGAAAACACAATAAGAAGCAACTCAGTCACTTGAAGATGAAGCTCCTAGCCATTGATGTTGTGGCTTTTGATGCAGAACAAAAGCAGTTCACAGATCCACGTGTGAGAGATTGGCTTCTCCGGGCCAAAGATATTGTGTTTGATGCAGAAGATCTCTTGTATGAAATATATTATGAACTCTCCAAAACCCAAGTGGAAGCTGATCAGTCTCAGAGTGCTACTAACAAGGTGTGGAATTCCCTCAAATCTTCTTTTATCACTTTCTTTGAAAAAGAAATTGAATACAGAATGAAACAAGTCATTGAGGACCTAGAAGATCTTGCAACCCAAAGCGATTTTCTAGGTTTGAAAAAGGTTAGTTGTGTTGGGGTTGGATCAGGATCAGGCTCGAGTAGTAAATTAACATATACATCTTTGCCAAATGAAAGTGTAATTTATGGCAGAGATGATGACAAAGACTTTGTGTTTAACTGGCTAACATCCGACACTCGCAACAACCTATCTATACTATCTATTGTGGGCATGGGTGGCTTGGGCAAGACCTCACTTGCCCAACATGTATTCAATGACCCAAGGATTGAAGCTAAATTTGATATTAAAGTTTGGATCAGTGTTCCACAGGAATTTGATGTTCTCAATGTATCAAAAGTAATTCTTGACACAATTACTGGTTCAACTGATCACTGTATACAGCAGGAAGTGGTTCAGAGAAGACTGAGAGAAAACTTTACGGGGAAGAAATTTCTTCTCGTTTTGGATGACGTTTGGAACGAAAGACAATCTAAATGGGAAGATGTGCAGAAGCCTCTAATTTTCGGAGGCCAAGGCAGTAGGATTCTTGTCACTACACGTAGTGAGAAGGTTGCTGTTACCATGCGATCAGAAAAACACCTCCTTCAGGTATTAAGGGAAGATTATTGCTGGGACTTGTTCGCAAAACATGCATTCCAAAGTGATAATACTCAACCACATCCAGAGTTTATAGAGATTGGTAAGAAGATAGTTGAAAAATGTAATGGGCTTCCTCTAGCCTTAAAAACAATGGGAAGTCTATTACACAATAAATCATCCTTTTGGGAATGGGAAAGCATTATGAAAAGTGAGATATGGGATTTTTCAGAAGATGAAAGTGATATACTCCCTGCTTTAAGATTGAGTTATCTCCACCTTCCTTCTCATCTCAAGAAATGTTTTTCTTTTTGTGCCTTATTTCCCAAAGGTTATGAATTTGACAAGGAGTGTTTAATTCAACTGTGGATGGCTGAAAATTTTCTACAAAGCCCGTTACAAAAAAAGAGTCCTAAAGAAGTTGGAGAACAGTATTTCTATGATTTGTTATCGTGGTCCTTCTTTCAACAATCCGACAATGAAGAGAAAAAGTGTTTTATGATGCATGACCTTCTAAATGATTTGGCAAAATACGTGAGTGAGGACATCTGCATCAGGTTAGGAGTTGATGAACCAAAAGGTATACCCAAGACAAGCCGTCATTTTTCATTTCCAACCACTACTGTTAAATATTTTGATGGGTTTGGAAGTTTGATTGATACTCAAAAGTTGCATACATTTATGCGAACTGATAGGAGAATGAATAATCCTTTTTGTTTCCGTTGGTATTGTAAGATGTCGATAGATGACTTGTTCTCCAAATTTAAGTTCATACGCGTATTGTCTTTGTCTCGTTGTAGTAACCTTAAAGTGGTGCCTCAATCTGTAGGAAATCTTAAGCATCTCCGTTCATTAGATCTTTCTTACACTGACATAGAAAAACTACCTCACTCGATAAGTTTACTCTGCATGTTACAAATATTGAAGCTGAACTATTGTCGAAGATTAAAGGAGCTTCCCTCATATTTGCATCAACTCGACAATTTGCGACGCCTTGAATTTATGAACACTGGAGTGAAAATTATGCCAATACATTTGGGAAAGTTGAAGAATCTCCAAGTATTGATGAGTTCCTTTTACGTTGAGAAAAGTAAGGAGTTCAGTATTCAGCAATTACGAGAACTGAATCTTCATGGAAGTCTAAGAATTCACGAGCTGCAGAATATTGAGAATCCCTCTTATGCATTAGAAGCAGATTTGAAGAACAAACCACATCTTCTGGAGCTACAATTAGAATGGAATATTACCGGCAACACCTCTGTAGATTCAACAAAAGCTGGGGATGTAATTGAGAATCTACGACCTTCCAAACACTTGAAAAAGTTATCAATATGGAACTATGTCGGTAAACAATTTCCAAATTGGTTACTCGATAATTCATTACCAAATCTGGTGTCCTTAGTGTTGCGCAAATGTAAATCTTGCCAACGTTTTCCTCCCCTTGGTCTTTTGCCATTTCTGAAGAAGCTGGAGATTTCAGGGTTTGATGAGATAGTGAGTATTGATGCTGATTTTCATGGGAACAACTCTTCTTCCTTTAAATCCCTTGAAACATTGTATTTCTCCAATATGAGTCAATGGGAAAAGTGGAACTGCCAAGCCGTGACAGGTGTTTTTCCACGTCTAAGACATCTTTCCATAACAAATTGTCCAGAGCTGAAAGGACAGCTGCCAGAGTTTGTTGCTTTAAAAGAACTAGAAGTCTTTCACTGCGAGAAACTAGAAGCTTTGATTGTGAGTGCTATAGAATTACGTCTAGAAGAGTGTGGAAAGCTGCAGTTGGACTCGGGTACAATGAAAAGGCACACAACTGGTTGGCACAACATGGAAACATCATTTGTGGAAATGGTTGGGCACATCATATTCTGCACTTCTCTTGAATACTTGCACATTAATTCTCCACTGAAGTCAATCAGAAATGACTCTGTCTCTCTAAGAACCTTTCCACTGGATTTATTCCCAAGACTTAGGATGCTTATTCTCAGCGGGCTTTGTGATCTGCAGATGGTTTCACAAGATCATGCTCATAATCATCTCCAGGATCTGACAATCAAAGAGTGCCCTAAATTTGAATCATTGCCTGCGAAAATGCATATGTTGCTTCCATCTCTCACGAAGCTGTCCATAGAAGATTGTCCACGATTTGAGTCATTCCTTGAAGGAGGTTTGCCATCAAATCTAGAGCATTTGACAATCAAAGAGTGTCCTAATTTTGAATCATTAACTGGAAACATGCATATGTTGCCTCCATCTCTTAAGTGGCTATGCATAGAAGACTGTCCAAGACTTGAGTCGTTCCCTGACGATGAGAAACTGGACTACAACAGTCTCATGACGCTAAACATATATGATTGTCCAAGACTTGAGTCGTTCCCTGACAGAGGTTTGCCATCAAATCTGAAGCATCTGACAATCATTAATTGCTCTAGACTTGTTGGCTCACTGAAAAAAGCTTTTAGAGACAGTTCTTCATTGGAAAGCTTGTACATTGCAGAACTGGATGCAGAATGTTTTCCTGATGAAGGTTTGCTTCCACCCTCTCTTACTTCCCTAACCATCCGTGGTTGTCCAAATCTAGAAAAATTGTACTACAAGGGTCTCTGTCCACTCTCATCCCTTCAAACATTGTCTCTTAAGAACTGCCCCAACCTCCAACGCTTACCGGAGGAGGGTATTCCCAAATCAATTTCAATTCTTGAAATAAGGCAATGTCCTTTGCTGAAACTGCGTTGCCAGAAAGGAGGTGAAGACTGGGAAAAGATTGCTCACATTGAAGCCCTGTTTATATCTTAG 3777 0.3921 MALEMVTGALISTFVERTIDTLASRLVHIFGARKHNKKQLSHLKMKLLAIDVVAFDAEQKQFTDPRVRDWLLRAKDIVFDAEDLLYEIYYELSKTQVEADQSQSATNKVWNSLKSSFITFFEKEIEYRMKQVIEDLEDLATQSDFLGLKKVSCVGVGSGSGSSSKLTYTSLPNESVIYGRDDDKDFVFNWLTSDTRNNLSILSIVGMGGLGKTSLAQHVFNDPRIEAKFDIKVWISVPQEFDVLNVSKVILDTITGSTDHCIQQEVVQRRLRENFTGKKFLLVLDDVWNERQSKWEDVQKPLIFGGQGSRILVTTRSEKVAVTMRSEKHLLQVLREDYCWDLFAKHAFQSDNTQPHPEFIEIGKKIVEKCNGLPLALKTMGSLLHNKSSFWEWESIMKSEIWDFSEDESDILPALRLSYLHLPSHLKKCFSFCALFPKGYEFDKECLIQLWMAENFLQSPLQKKSPKEVGEQYFYDLLSWSFFQQSDNEEKKCFMMHDLLNDLAKYVSEDICIRLGVDEPKGIPKTSRHFSFPTTTVKYFDGFGSLIDTQKLHTFMRTDRRMNNPFCFRWYCKMSIDDLFSKFKFIRVLSLSRCSNLKVVPQSVGNLKHLRSLDLSYTDIEKLPHSISLLCMLQILKLNYCRRLKELPSYLHQLDNLRRLEFMNTGVKIMPIHLGKLKNLQVLMSSFYVEKSKEFSIQQLRELNLHGSLRIHELQNIENPSYALEADLKNKPHLLELQLEWNITGNTSVDSTKAGDVIENLRPSKHLKKLSIWNYVGKQFPNWLLDNSLPNLVSLVLRKCKSCQRFPPLGLLPFLKKLEISGFDEIVSIDADFHGNNSSSFKSLETLYFSNMSQWEKWNCQAVTGVFPRLRHLSITNCPELKGQLPEFVALKELEVFHCEKLEALIVSAIELRLEECGKLQLDSGTMKRHTTGWHNMETSFVEMVGHIIFCTSLEYLHINSPLKSIRNDSVSLRTFPLDLFPRLRMLILSGLCDLQMVSQDHAHNHLQDLTIKECPKFESLPAKMHMLLPSLTKLSIEDCPRFESFLEGGLPSNLEHLTIKECPNFESLTGNMHMLPPSLKWLCIEDCPRLESFPDDEKLDYNSLMTLNIYDCPRLESFPDRGLPSNLKHLTIINCSRLVGSLKKAFRDSSSLESLYIAELDAECFPDEGLLPPSLTSLTIRGCPNLEKLYYKGLCPLSSLQTLSLKNCPNLQRLPEEGIPKSISILEIRQCPLLKLRCQKGGEDWEKIAHIEALFIS* 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2058 1258 ProSiteProfiles Leucine-rich repeat profile. 609 630 IPR001611 GO:0005515
Pvu11g2058 1258 Pfam NB-ARC domain 181 398 IPR002182 GO:0043531
Pvu11g2058 1258 Gene3D Ribonuclease Inhibitor 935 1101 IPR032675 -
Pvu11g2058 1258 Gene3D - 334 417 IPR042197 -
Pvu11g2058 1258 Gene3D Ribonuclease Inhibitor 550 930 IPR032675 -
Pvu11g2058 1258 Gene3D - 160 333 IPR027417 -
Pvu11g2058 1258 PRINTS Disease resistance protein signature 201 216 - -
Pvu11g2058 1258 PRINTS Disease resistance protein signature 274 288 - -
Pvu11g2058 1258 PRINTS Disease resistance protein signature 370 384 - -
Pvu11g2058 1258 PRINTS Disease resistance protein signature 581 597 - -
Pvu11g2058 1258 SUPERFAMILY L domain-like 496 901 - -
Pvu11g2058 1258 Gene3D - 15 141 - -
Pvu11g2058 1258 PANTHER OS05G0414200 PROTEIN 20 1024 - -
Pvu11g2058 1258 Pfam Rx N-terminal domain 14 102 IPR041118 -
Pvu11g2058 1258 PANTHER DISEASE RESISTANCE PROTEIN RP 20 1024 IPR044974 GO:0006952
Pvu11g2058 1258 SUPERFAMILY L domain-like 948 1250 - -
Pvu11g2058 1258 Gene3D Ribonuclease Inhibitor 1102 1241 IPR032675 -
Pvu11g2058 1258 Gene3D - 418 506 IPR036388 -
Pvu11g2058 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 433 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2058 Pvu-Chr11 47479168 47483321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2058 575 683 Receptor kinase-like Gene Family AT4G13920 33.929 1.65e-07 53.9