Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2056 ATGGCACTAGAAATGGTTACCGGTGCTCTTGTTTCTACATTCGTCGAGAGGACTATTGACACTTTGGCTTCCCGTCTTGTCCACATATTCGGTGCAAGAAAACACAAAAAGAAGCAACTCAGCGACTTGAAGATGAAGCTCCTAGCCATTGATGTTGTGGCTTTTGATGCAGAGCAAAAGCAGTTCACTGATCCACGTGTTAGAGATTGGCTTCTCAGGGCAAAAGATGTTGTGTTTGATGCAGAAGATCTCTTGGAGGAAATAGATTATGAACTCTCCAAAAGTCGCCAAGTGGAAGCTGAGTCTCAGAGTGCTACTAACAAGGTGTGGAATTCCCTCAAATCTTCTTTTGTCACTTTCTTTGAAAATGAAATTGAATCCAACATGCAACAAGTCATTGAGGACCTAGAACATCTTGCTACCCAAAGCGATTTTCTAGGTTTGAAAAAGGCTAGTGGTGTTGGGGTTGGATCAGGATCGAGCAGTAGATTAACATATACATCTTTGCCAAATGAAAGTGTTATTTATGGCAGAGATGATCACAAAGAATTTGTCCTTAACTGGCTCACCTCTGACACTCAGAACAACCTATCTATACTTTCTATTGTGGGCATGGGTGGGTTGGGTAAGACCTCACTTGCCCAACATGTATTCAATGACCCAAAGATTGAAGGTAAATTTGATATTAAAGCTTGGGTCAGTGTTCCACAAGAATTTGATGTTCTCAATGTATCTAGAGCAATTCTGGACACAATTACCAGCTCAACTGATCATAGTATACAACAGGAAGTGGTTCAGAGAAGACTGGAAGAAAAATTGACGGGGAAGAAATTTCTTCTCATTTTGGATGACGTTTGGAACGAAAGACAATCTAAATGGGAGGATGTGCAGAAACCCTTACTTTTTGGAGGCCAAGAAAGTAGGATTCTTGTCACTACACGTAGTGAGAAGGTTGCTGTTACCATGAGATCAGAAAAACACCTTTTGAAGGTATTAAGCAAAGATTATTGCTGGGACTTGTTCGCAAAACATGCATTTCAAATTTCTAATCCTCAACCAGATCCTGACTTCTTGGAGATTGGTAAGAAGATAGTTGAAAAATGTAATGGGCTTCCTCTAGCCTTAAAAACAATGGGAAGTCTATTACACAGTAAAACATCCGTTTGGGAATGGGAAAGCATTATGAAAAGTGAGATATGGGATTTTTCAGAAAATGAAAGTGATATACTCCCTGCTTTAAGATTGAGTTATCTCCACCTTCCTTCTCATCTGAAGAAATGTTTTGCTTTTTGTGCCTTATTTCCCAAAGGTTATAGGTTTGACAAGGAGTGTTTAATTCAACTGTGGTTGGCTGAAAATTTTCTAGAAAGTCCACTACAAAAAAGGATTCCTAAAGAAGTTGGAGAACAATATTTCAATGATTTGTTATCTTGGTCTTTCTTTCAAGAATCCGGAAAAGAAGAGGAAAAGCATTTTATCATACATGACCTTCTAAATGATTTGGCAAAATTCGTTTGTGAGGACATCTGCATCAGGTTAGGAGTTGATGAACCAAAAGGTATACCCAAGACAAGCCATCATTTTTCATTTCCTACCAGTGGTGTTGTACATTTTGATGGGTTCGGAAGTTTGATTGATACTCAAAAGTTGTATACATTTATGCGAACTGACATGAGAATGTATAATCCTTTTTGTTTCCCTTGGTATTGTAAGATGTCGATAGATGACTTGTTCTCCAAATTTAAGTTCATACGCTTCTTGTCTCTGTCTCATTGTCGTAACCTTAGAGAGGTGCCTAAATCTGTAGGAAATCTTAAGCATCTCCGTTCATTAGATATCTCTTTTACTAAAATAGAAAAATTACCTGACTCCTTAAGTTTACTCTACAAGTTGCAAATACTGAAGCTGAACTATTGTCCAAGATTGAAGGAGCTTCCCTCATATTTGCATCAACTGGACAATCTGCGATACCTTGAATTTATAAATACTAAAGTCAAAATTGTGCCAGCACATTTGGGAAAGCTCAAGAATCTCCAAGTATTGATGAGTTCGTTTTATGTTGAGAAAAATAAGGAATTCAGTATTCAGAAATTAGGACAACTCAATCTTCATGGAAGTCTAGCAATTCATGAGCTGCAGAATATTGAGAATCCCTCTTATGCATCAGAAGCAGATTTGAAGAACAAACCAGACCTTGTGGAGCTACAGTTAGAATGGAATATTATGGACAGCTCCTCTGTTGATTCAACCAAAGCTGGGGATGTAATTGAGAATCTACAACCTTCAAAATACTTGAAGAAGTTATCAGTAAGGAACTTTGTTGGTAAACAACTTCCAAATTGGGTACTCGATAATTCGTTACTGAATCTGGTGTCCTTATCCTTTATGAATTGTACATGTTGCCAACATTTTCCTCCGCTTGGTCTTTTGCCATTTCTGAAGAAGCTGGAGATTTCAGGGTTTGATGAGATAGTGAGTATTGATGCTGATTTTCATGGGAACAACTCTTGTTCATTTAAATCCCTTGAAACATTAGAGTTCTCCAATATGAGTCAATGGGAAAAGTGGGAATGCCAAGCTCTGACACGTGCTTTTCCATGTCTACGACAACTTTTCATAAGAAAATGCCCGAAGCTGAAAGGAGAGCTGCCAGAGCAAGTTGTTCCTTTGGAAAGACTACAAATTGAAGACTGTCAAGAACTTGAGGCTTCCGCTCCCAGGACTCTATATTTACTCCTAAGTGACTGTGGAAAGTTGCAGTTGGACTGTGCTTCACTGAGAAGTCTTACAATGGGTGGGCACAACATGCAAACATCATTGCTGGAAATTGTTGGGAAGTCCAACACTCTTGATCTGTTAGTGATATATTCACTTTTGGAGTCACTGGAGCATCTTCGTATCAGTAGGTGCCATAAATTAGAATCATTGCCTGCAAACATGCATCTGCTGCTTCCATCTCTCTGGTATCTATCCATAGAAGACTGTCCAAGACTTGAGTTGTTCCCCAACAGAAGTTTGCCATCAAATCTAAAAGAGCTGAGAATCCGTAAGTGCTCTAGACTTGTGGGCTCACTAAAAGGAGCTTTCGGTGACATTTGTTCTTTGAAAAGGTTGAAGTTTGAAGAAGTGGATGCAGAATGTTTTCCTGACGAAGGTTTGCTTCCACTCTCTCTTACTGATCTATCCATCTATCATTGTCCGAATCTAGAGAAACTGGAGTACAAGGGTCTCTATCAACTCTCATCCCTTCAAACACTGACACTTTTTGACTGCCCTAACCTCCAACGCTTACCACAGGAGGGTCTTCCCAAATCAATTTTAAATCTTATAATAAACCAGTGTCCTTTGCTGAAACAGCGTTGCCAGAAAGAAGGAGGCGAAGACTGGGAAAAAATTGCTCACATTCGACACTTGTATATACCGAAGTAA 3429 0.3917 MALEMVTGALVSTFVERTIDTLASRLVHIFGARKHKKKQLSDLKMKLLAIDVVAFDAEQKQFTDPRVRDWLLRAKDVVFDAEDLLEEIDYELSKSRQVEAESQSATNKVWNSLKSSFVTFFENEIESNMQQVIEDLEHLATQSDFLGLKKASGVGVGSGSSSRLTYTSLPNESVIYGRDDHKEFVLNWLTSDTQNNLSILSIVGMGGLGKTSLAQHVFNDPKIEGKFDIKAWVSVPQEFDVLNVSRAILDTITSSTDHSIQQEVVQRRLEEKLTGKKFLLILDDVWNERQSKWEDVQKPLLFGGQESRILVTTRSEKVAVTMRSEKHLLKVLSKDYCWDLFAKHAFQISNPQPDPDFLEIGKKIVEKCNGLPLALKTMGSLLHSKTSVWEWESIMKSEIWDFSENESDILPALRLSYLHLPSHLKKCFAFCALFPKGYRFDKECLIQLWLAENFLESPLQKRIPKEVGEQYFNDLLSWSFFQESGKEEEKHFIIHDLLNDLAKFVCEDICIRLGVDEPKGIPKTSHHFSFPTSGVVHFDGFGSLIDTQKLYTFMRTDMRMYNPFCFPWYCKMSIDDLFSKFKFIRFLSLSHCRNLREVPKSVGNLKHLRSLDISFTKIEKLPDSLSLLYKLQILKLNYCPRLKELPSYLHQLDNLRYLEFINTKVKIVPAHLGKLKNLQVLMSSFYVEKNKEFSIQKLGQLNLHGSLAIHELQNIENPSYASEADLKNKPDLVELQLEWNIMDSSSVDSTKAGDVIENLQPSKYLKKLSVRNFVGKQLPNWVLDNSLLNLVSLSFMNCTCCQHFPPLGLLPFLKKLEISGFDEIVSIDADFHGNNSCSFKSLETLEFSNMSQWEKWECQALTRAFPCLRQLFIRKCPKLKGELPEQVVPLERLQIEDCQELEASAPRTLYLLLSDCGKLQLDCASLRSLTMGGHNMQTSLLEIVGKSNTLDLLVIYSLLESLEHLRISRCHKLESLPANMHLLLPSLWYLSIEDCPRLELFPNRSLPSNLKELRIRKCSRLVGSLKGAFGDICSLKRLKFEEVDAECFPDEGLLPLSLTDLSIYHCPNLEKLEYKGLYQLSSLQTLTLFDCPNLQRLPQEGLPKSILNLIINQCPLLKQRCQKEGGEDWEKIAHIRHLYIPK* 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2056 1142 Gene3D - 416 504 IPR036388 -
Pvu11g2056 1142 Coils Coil 122 142 - -
Pvu11g2056 1142 Gene3D - 159 331 IPR027417 -
Pvu11g2056 1142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 431 IPR027417 -
Pvu11g2056 1142 SUPERFAMILY L domain-like 923 1133 - -
Pvu11g2056 1142 SUPERFAMILY L domain-like 494 895 - -
Pvu11g2056 1142 Pfam Rx N-terminal domain 14 101 IPR041118 -
Pvu11g2056 1142 ProSiteProfiles Leucine-rich repeat profile. 607 628 IPR001611 GO:0005515
Pvu11g2056 1142 PRINTS Disease resistance protein signature 199 214 - -
Pvu11g2056 1142 PRINTS Disease resistance protein signature 272 286 - -
Pvu11g2056 1142 PRINTS Disease resistance protein signature 368 382 - -
Pvu11g2056 1142 PRINTS Disease resistance protein signature 579 595 - -
Pvu11g2056 1142 Gene3D - 332 415 IPR042197 -
Pvu11g2056 1142 PANTHER OS05G0414200 PROTEIN 20 979 - -
Pvu11g2056 1142 PANTHER DISEASE RESISTANCE PROTEIN RP 20 979 IPR044974 GO:0006952
Pvu11g2056 1142 Pfam NB-ARC domain 179 396 IPR002182 GO:0043531
Pvu11g2056 1142 Gene3D - 15 125 - -
Pvu11g2056 1142 Gene3D Ribonuclease Inhibitor 908 1139 IPR032675 -
Pvu11g2056 1142 Gene3D Ribonuclease Inhibitor 569 907 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2056 Pvu-Chr11 47455404 47458955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2056 574 826 Receptor kinase-like Gene Family AT4G13920 25.758 1.15e-09 60.8