Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2048 CCTGTGATTGATCAAAACTTCTACTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCTGCTATGACTTTTGTGATGGCAGTCTTTTGCAGGATGGAGAAGATAAACATGAAGCAAGTGAGATGCATAGCAAAGGTAGTGGGAACTTTAGTGACAGTTGCAGGGGCTATGCTAATGACCTTATACAGAGGTCCTATAGTGGAGATGGTTTGGGCAAAACATCCTCAAAATAAAGGCAATGGAACAAGCACCACAGGATCATTGGACAAAGATTGGTTCCTAGGATGCATCTTTCTCATTATTGCCACCCTTGCTTGGGCTTCCCTCTTTGTTTTACAAGCAAAAGCTATACAAACCTACAAGAATCATCAGCTAAGCCTCACTTCACTTGTGTGCTTTATTGGCACTATTCAAGCTATTGCTGTTACTTTTGTTGTTGAACACAACCCTTCTGTTTGGAGAATTGGCTGGGATATGAACTTACTTGCTGCTGCATATGCTGGGATTGTGACATCAAGCATATCATACTATGTACAAGGACTGGTAATTAAGAAGAAAGGACCTGTCTTTGCCACTGCCTTTAGCCCTTTAATGATGATCATTGTTGCCATCATGGGTTCCTTTCTCCTTGCAGAACAAATTTATCTTGGAGGTGTGATTGGTGCCATCTTAATTGTCATAGGTTTATACTCAGTTCTGTGGGGAAAGCACAAAGAACAAATAGAGAGTAAAGTGGCAGATGAAATTCCCTTAAAGGGTGCTCAAAGTTCTGTGATTGCAGGGCTAAATGATTTTAGTGAAGAAAAATGTGGTGAGAAAAGAGACTCCAACAATAACAAGCCCTCCTCAGTTGTAATAACCATGCCTGTTAGAGAGGCTATCACCAAAGACAATCAAGAGGGAAAGGCTTAA 936 0.4145 PVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVFCRMEKINMKQVRCIAKVVGTLVTVAGAMLMTLYRGPIVEMVWAKHPQNKGNGTSTTGSLDKDWFLGCIFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLVCFIGTIQAIAVTFVVEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFLLAEQIYLGGVIGAILIVIGLYSVLWGKHKEQIESKVADEIPLKGAQSSVIAGLNDFSEEKCGEKRDSNNNKPSSVVITMPVREAITKDNQEGKA* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2048 311 PANTHER WAT1-RELATED PROTEIN 1 271 - -
Pvu11g2048 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 246 - -
Pvu11g2048 311 Pfam EamA-like transporter family 102 241 IPR000620 GO:0016020|GO:0016021
Pvu11g2048 311 PANTHER WAT1-RELATED PROTEIN 1 271 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2048 Pvu-Chr11 47341552 47344536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2048 1 308 Nodulin-like Gene Family AT5G07050 60.000 5.94e-133 382
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2048 11 47341552 47344536 Pvu11g2048 11 47341552 47344536 ECH
Pvu5g0169 5 1406829 1411481 Pvu11g2048 11 47341552 47344536 PCT