Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2046 ATGGCCGCCACGCCTCCTTCCTTTTCCCCCTCTCGCACCACCTGCGCCTCTCTCCTCCGCGAATTGCAGGTGATATGGGATGAGATTGGGGAAAGTGACAATGATAGAGACAACATGCTTCTTCAACTAGAGCAAGAGTGTCTTGACATTTATCACCGGAGAGTTGAGGAGACGAGGAAGCACAAGGCTGACATGTATCAGTGGTTGGCAGATGCTGAAGCTCAAGCAACTAATCTTGTTTCTTCCCTTGGGGAATCTACCGTGCTCCCACGGGGGAAGGGAACTCTGAAGCAGCAAATAACTACCATTAGACCTGTCTTAGAGGATTTGAGGTCGAAGAAGGATGACAGAATCAAGGAATTTTTAAAGATAAAGTCCCAAATTTCTCAGATATGTGATGAAATAGCAGGTTGTGGACAGTTCAAAAGTGTCACAGATTCAGATGTTAATCAAAGTGATCTGACATCAAAGAAATTGGGGGAACTCAAGTCGCATCTACAGGAGCTTCAGAACGAAAAGGCATTGCGCCAGCAGAAAGTGAAGAGTCATATCAGTACTATTAGTGAGCTTACAGAAGTAATGTCAATTGATTTTAGGAAGACATTAAATGAAATTCACCCAAGTCTGGACGATTCATTAAAAGGTACACTACAGAGCATCAGCAATGACACGCTTGCAAGATTAACTGGGGTTATTCATTCATTAAAGAGGGAGAAGCAACAAAGGCTTCAAAAGATACAAGAGCTTGCTAAAATGCTGGTAGAGCTATGGGATCTCATGGAGACACCAACTGAAGAGCAAAAGGTGTTTAGTCATGTTACTCGATTAAGTTCAGCATCAGTGGATGAAGTGTCAACACATGGTTGCCTTTCGTCAGAAGTCATTGAGCAGGTTGAAGGTGAAGTCCAGCGGTTAAATGTTGTCAAAGCCAGTAAGATGAAGGATTTGGTGTTTAAGAGGCAGAATGAGCTTGAAGCAATTTACAGAGGAGTTCACATGGATGTCGACAGTGAATCTGCAAGACAGATTTTGACTAGCCTCATTGAATCTGGTAATATTGATCTCTCTGACTTGCTTCAAAACATGGATGGTCAAATAAGACAAGCCAAAGAGCAAGCTCTAAGCAGAAGAGATATCTTAGATAGGACAGAGAAATGGAAATTTGCAGCTGAGGAGGAAAAGTGGTTAGATGAATACGAAAGGGATGAAAATCGATATAGTGCTGTAAGAGGAGCTCACAAAAATTTGAAGCGCGCTGAAAAAGCTCGGATTCTTGTCAGCAAGCTACCATCTACTGTTGAGAATTTGACTGCTAAAGTAAAAGCGTGGGAAATGGAAAAAGGAATACCTTTTTTGTATGAAAAGATACCATTATTACATAGCTTGGATGAATATATTGTACAACGCCAACTCAGAGAAGAAGAGAAGCGCAAATATCGGGAGCAGAAACGGCTACAAGAACAAGCAGCTGTAGAGCAAGAGGCACTTTTTGGATCAAGGTCTGCAACAAAGAAGCCTCTGTGTCAGAGCAACAATGCCAACACCATGGCAGGGACACCAACCGCCCGTAGACTGCTGGCTTCCTCCGGACGCCATGGAACCCCAGGAGGAAAGGAACGCAGAGAAAGTGGCAGAGTGAACAACATAATTCCAGTGAACTATGTTGCCCTTCCAAAAGATAATTCTGTTTCTAGGGGCAATTGA 1704 0.4319 MAATPPSFSPSRTTCASLLRELQVIWDEIGESDNDRDNMLLQLEQECLDIYHRRVEETRKHKADMYQWLADAEAQATNLVSSLGESTVLPRGKGTLKQQITTIRPVLEDLRSKKDDRIKEFLKIKSQISQICDEIAGCGQFKSVTDSDVNQSDLTSKKLGELKSHLQELQNEKALRQQKVKSHISTISELTEVMSIDFRKTLNEIHPSLDDSLKGTLQSISNDTLARLTGVIHSLKREKQQRLQKIQELAKMLVELWDLMETPTEEQKVFSHVTRLSSASVDEVSTHGCLSSEVIEQVEGEVQRLNVVKASKMKDLVFKRQNELEAIYRGVHMDVDSESARQILTSLIESGNIDLSDLLQNMDGQIRQAKEQALSRRDILDRTEKWKFAAEEEKWLDEYERDENRYSAVRGAHKNLKRAEKARILVSKLPSTVENLTAKVKAWEMEKGIPFLYEKIPLLHSLDEYIVQRQLREEEKRKYREQKRLQEQAAVEQEALFGSRSATKKPLCQSNNANTMAGTPTARRLLASSGRHGTPGGKERRESGRVNNIIPVNYVALPKDNSVSRGN* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2046 567 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 506 - -
Pvu11g2046 567 MobiDBLite consensus disorder prediction 526 547 - -
Pvu11g2046 567 Coils Coil 462 488 - -
Pvu11g2046 567 Coils Coil 232 256 - -
Pvu11g2046 567 Coils Coil 152 179 - -
Pvu11g2046 567 Gene3D - 366 499 - -
Pvu11g2046 567 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 5 12 561 - -
Pvu11g2046 567 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 12 561 IPR007145 GO:0000226|GO:0008017
Pvu11g2046 567 Coils Coil 352 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2046 Pvu-Chr11 47328316 47335214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2046 13 494 EF-hand Containing Proteins AT5G62250 38.337 3.35e-95 299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2046 11 47328316 47335214 Pvu11g2046 11 47328316 47335214 ECH