Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2042 ATGTCTCCATCAGTGAAATCAAAACCCAAGTCCCAGGAGAAGGCCTCTGCACGGGCTGGTAAGGAACAGCAGAAGACTTCTCCAAAGACTTATATGTCTCCTACTCATGGTAGCGGCATTCCTGCTAGTCCACAAAATCCCATCTTGGGAACATTTCAAACTCCAGAAGCATCATTGGTTGCTTCCTCTATTCGAGTTCATGACAGCAGTCATTTCCTGAAAGTAGATGAAGCAGACGAGCATTCTAGTAGTCCTCAAGGAACCGTGTCTGAGTGTGATTCAGTTTCTATCAGTGGCAGCTGCTCTGGAGAGTCAGAAGAGTCTAAAGAGAAGGTAGCAGTACCAAACTCTTCTACGCGGCCTGATAGCGTACCTGGTTGTGATAGTGACAGGAGGGAGAAAATCCGTTTGAAGAATGAGAGGAAGCACCAGAGACAGAGGGAAAGGAGAGCTCAAGAGTTGCATGACCGTTGTCGTGGGTACCTACTGTCAAGAAAGCTAGAATCACTTGCACAGCAATTAGTGGCAATGGGGTTCTCTTTCGAACGAGCTACATTGGCCTTAATGTTAAATGATGGCAAATTAGAGCAATCAGTATCCTGGCTATTTGAAGCAAATGAAGAACATTCACAAGCTAATGATACTACCAGCCTTGTGAGTGAGGGTAATTTGAAAATTGACATAACTGATGAGCTTGCTCAGATATCTGCCTTGGAGGTCAAGTACAATTGTTCAAAGCAAGAAGTTGAAAGAGCAATTATTACTTGTGAAGGTGATCTTCATAACGCAGAAAATACCTTAAAAACACATAAGCAGGAATATCCTGGGAACCAATCCAAGTCCGAAGATTCCGGTCAAAGCAATAATAGTCAGGTGAGATCACAAGGATTGCCGGCACAGCCAGTTTCCATCCAGCAGAGAGGGAGTGAAAGTGACTTTAACCATTACAACAAGGAAGGTGGTTCTGATTCTATGTTCCCTGATCTTGAAACCGGGAATGTACATTCTCTACAACCGAACCATCCAAATGTAACGACCGAGAGAAGATGGAGCGGTGTTCCAGGATCAAGCCCTTCTTCTGCTATGTTAGCCATGTCACCATCCATGCAAGCAGTGTCCCCATTGATGAAAATGGAGGCTGGCCTGCCTATTGGTGTTGCAAACGAAGGAAGAATGATTCAACAAGGACTAGGAAGGGAGCCAGTGATGATGCAACATCCACAGTTCACAAATGCCAAACAAAGCTCTATGGTTTCTTTAAATTCCTTTCCTTCAGGAGCAGCAGGGTGGTATGTAAATAGTATTCCAGGTGTTGAAAATGTGAGGTCAAATGGAAAGTTACTACAAACTCAAAGTGTAAGAAGTGTGAGTCCAAATCATTTGGAGCAATTTTGTCAAACTCCTTACAAAGAATATTCTCATTTCTTTGGACCAGCAGCAGATTACTCATCTGCTGGGGTGGGTGGTTTCTGCAAGCCAATGGGTGCATCATCAGCACCTCCACCTTCTATTCCTCCTCCTCGTCATCAAGGTTCATGGAGCATGAACGCCCCGTCGTCACCAGCACTCGCGGTGCCGACTTCCCTCGGACTATTTTCTGGTCATCAGAATGCAGCCAGAACATTCAGCTCACATTCACACATGGATTGGAACACTGGGGGCTTGATGCCAGAATTTGACTACACCAGCATAGATTGGAGTTTGAATGTGCCATCTTCTTCAGGTGGACCTTGTCTAGGGATCTCCTCATTGTTGAGAAACAGTTATGGAAATAGGAGAAGCAATCCCTGCATGAGTGGATTGCAAAATGTTGGCATGACTAGGGAAACTTCATCATCTGCAGGATTGAGAGAGTGGACCACTCCTTTTGCTGGGAAGGACTTGTTCAGTGTTCCTAGGCAGTTTGTTACCTCTCCTCCTATTTAG 1926 0.4502 MSPSVKSKPKSQEKASARAGKEQQKTSPKTYMSPTHGSGIPASPQNPILGTFQTPEASLVASSIRVHDSSHFLKVDEADEHSSSPQGTVSECDSVSISGSCSGESEESKEKVAVPNSSTRPDSVPGCDSDRREKIRLKNERKHQRQRERRAQELHDRCRGYLLSRKLESLAQQLVAMGFSFERATLALMLNDGKLEQSVSWLFEANEEHSQANDTTSLVSEGNLKIDITDELAQISALEVKYNCSKQEVERAIITCEGDLHNAENTLKTHKQEYPGNQSKSEDSGQSNNSQVRSQGLPAQPVSIQQRGSESDFNHYNKEGGSDSMFPDLETGNVHSLQPNHPNVTTERRWSGVPGSSPSSAMLAMSPSMQAVSPLMKMEAGLPIGVANEGRMIQQGLGREPVMMQHPQFTNAKQSSMVSLNSFPSGAAGWYVNSIPGVENVRSNGKLLQTQSVRSVSPNHLEQFCQTPYKEYSHFFGPAADYSSAGVGGFCKPMGASSAPPPSIPPPRHQGSWSMNAPSSPALAVPTSLGLFSGHQNAARTFSSHSHMDWNTGGLMPEFDYTSIDWSLNVPSSSGGPCLGISSLLRNSYGNRRSNPCMSGLQNVGMTRETSSSAGLREWTTPFAGKDLFSVPRQFVTSPPI* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2042 641 MobiDBLite consensus disorder prediction 273 311 - -
Pvu11g2042 641 MobiDBLite consensus disorder prediction 495 517 - -
Pvu11g2042 641 Gene3D - 128 218 - -
Pvu11g2042 641 PANTHER DOMAIN PROTEIN, PUTATIVE-RELATED 1 640 - -
Pvu11g2042 641 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 165 205 IPR015940 -
Pvu11g2042 641 SUPERFAMILY UBA-like 168 211 IPR009060 GO:0005515
Pvu11g2042 641 PANTHER UBIQUITIN-ASSOCIATED/TRANSLATION ELONGATION FACTOR EF1B PROTEIN 1 640 - -
Pvu11g2042 641 MobiDBLite consensus disorder prediction 82 103 - -
Pvu11g2042 641 MobiDBLite consensus disorder prediction 76 152 - -
Pvu11g2042 641 MobiDBLite consensus disorder prediction 329 361 - -
Pvu11g2042 641 SMART uba_6 167 204 IPR015940 -
Pvu11g2042 641 MobiDBLite consensus disorder prediction 1 54 - -
Pvu11g2042 641 MobiDBLite consensus disorder prediction 21 54 - -
Pvu11g2042 641 MobiDBLite consensus disorder prediction 273 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2042 Pvu-Chr11 47294171 47297641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2042 7 640 EF-hand Containing Proteins AT5G12120 33.730 2.21e-83 273