Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2041 ATGGAGGGAAAACAACTGAATGTGAGATCAATATATTCCTTTATTTTTCTGTTTTTGCTAAGCTTCAAACCACTTGTTACAGAGGCACAATCCCCCAACTATGTGGGAGATGACTGCAATTCCACCACCACAACATCTCTCAGCAGTGCATACAAAGCCAACCTTAACAGTGTCCTCTCATGGCTATCCTCAGATGCAGCCACAAGCAAAGGCTATAACCACAACAGCTTTGGCAACAACACCCCTGGTGCAGATGCTGCTGTGTATGGCCTCTATGATTGCCGTGGTGATGTTTCTGGATACTTTTGTCAGTTCTGTGTGTCCACTGCTTCCAGAGAAGTTCTTCAGCGCTGCTCCAACAGGGTATCTGCTATTATATGGTATGATTTCTGCATCTTAAGGTACTCAAATGAGAACTTCTTTGGGAATGTTACAGTAGACCCATCATGGAATCATTCTGGACCAAAAAATGTCTCTAGTGTGGAAGAGATTCAGAAGGGTGAGGGTTTTATGAGAAGTTTGATCAGAAAAGCTACTGTGGAGACCAACCAGTTGTACTACATGGATGGCTTCAATTTGAGCTCCACTCAGAGAAGGTATGGAATGGTTCAATGCAGTAGAGATCTCACAAATGAAGGGTGCAGCCAGTGTTTGGAGGCCATGTTAGCAAAAGTTCCCAAATGTTGTGAGCATAAGTTGGGGTGGCAAGTTTCCACTGCAAGTTGTCTCATAAAGTATGATGACTATATTTTCTACCTTTTTCACAATCCAGCATCTTCTGTTTCTGTGCCTGATACACAAATAGCCAAACAGAGGAGTGGTAGTAAGGCAAAACTATTGATCATTGGCTTAAGCGTGCTGGGGGCAGTAGCTTTGCTATGTTTCAGTGTTTATTGCTTCTGGTTCAGGAAAAGAACTAGAAGTGGAAGAAAAACAGGAGGGCGTATTCCTGACACCATTCGTCTGTCATCATATCACAATGTTCAAACAGATGAAACACTGAATCCAGACGTTCCTATAATCCCATTAAACACGATTCTACAAAGTACTGATAACTTTTCAGAAGCATCTAAGCTAGGGGAAGGTGGATTCGGCCCAGTTTACAAGGGAACTCTACCAGATGGAAGAAAAATTGCAGTGAAAAGACTCTCAGAATCTTCTGGTCAAGGGTCAGAAGAGTTCAAGAATGAAGTAATGTTTATAGCTAAATTGCAGCATCGCAACCTTGTAAGACTTTTGGCATGCTGCTTGGAGGAAAAAGAGAAGATTCTTGTATATGAGTATATGACCAATGCAAGTCTCGACTTTCACCTCTTTGATGAAAGAAAGAAAAGACAGCTGGATTGGAAACTAAGATTAAGCATTATACATGGCATAGCAAAAGGTCTCTTATATCTTCACGAGGATTCTAGACTCAAAGTTATTCATAGAGATCTCAAAGCTAGTAATGTTTTATTAGATGATGAGATGAATCCTAAAATATCAGATTTTGGATTGGCAAGATCATTTGAGAAAGGCCAGAACCAAGCAAATACAAGACGAGTAATGGGCACATATGGATACATGGCTCCAGAGTACGCAATGGAAGGATTGTTTTCAGTGAAATCTGATGTTTTCAGTTATGGAGTTCTTGTTCTAGAAATCATTTGTGGCAAAAAGAACAGTGGATTCTATCTATCAGAATGTGGTCAAAGTCTTACACTATATGCTTGGAAAGTTTGGTGTGCAGGAAAATGTTTGGAACTAATGGATCCAGTGTTGGAGGAATGTTGTGTGGAGAGTGAAGTTGTGAAGTGCATACACATTGGTCTGTTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACAATGTCCACTGTGGTTGTAATGCTAGCAAGTGACATGATGTCTCTTCCAAAACCTAACCAACCAGCATTTTCAGTAGGAAGAATGACCTTAGACGATGCATCTACATCAAAAAGTTCCAAGAATCTTTCCATTAATGATGTCACTGTCTCTAACATTTTTCCAAGGTAA 2016 0.4058 MEGKQLNVRSIYSFIFLFLLSFKPLVTEAQSPNYVGDDCNSTTTTSLSSAYKANLNSVLSWLSSDAATSKGYNHNSFGNNTPGADAAVYGLYDCRGDVSGYFCQFCVSTASREVLQRCSNRVSAIIWYDFCILRYSNENFFGNVTVDPSWNHSGPKNVSSVEEIQKGEGFMRSLIRKATVETNQLYYMDGFNLSSTQRRYGMVQCSRDLTNEGCSQCLEAMLAKVPKCCEHKLGWQVSTASCLIKYDDYIFYLFHNPASSVSVPDTQIAKQRSGSKAKLLIIGLSVLGAVALLCFSVYCFWFRKRTRSGRKTGGRIPDTIRLSSYHNVQTDETLNPDVPIIPLNTILQSTDNFSEASKLGEGGFGPVYKGTLPDGRKIAVKRLSESSGQGSEEFKNEVMFIAKLQHRNLVRLLACCLEEKEKILVYEYMTNASLDFHLFDERKKRQLDWKLRLSIIHGIAKGLLYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARSFEKGQNQANTRRVMGTYGYMAPEYAMEGLFSVKSDVFSYGVLVLEIICGKKNSGFYLSECGQSLTLYAWKVWCAGKCLELMDPVLEECCVESEVVKCIHIGLLCVQEDAADRPTMSTVVVMLASDMMSLPKPNQPAFSVGRMTLDDASTSKSSKNLSINDVTVSNIFPR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2041 671 ProSiteProfiles Gnk2-homologous domain profile. 146 251 IPR002902 -
Pvu11g2041 671 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 20 669 - -
Pvu11g2041 671 Gene3D - 32 140 IPR038408 -
Pvu11g2041 671 Gene3D - 153 251 IPR038408 -
Pvu11g2041 671 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Pvu11g2041 671 Pfam Protein tyrosine and serine/threonine kinase 357 622 IPR001245 GO:0004672|GO:0006468
Pvu11g2041 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Pvu11g2041 671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 669 - -
Pvu11g2041 671 Pfam Salt stress response/antifungal 171 249 IPR002902 -
Pvu11g2041 671 Pfam Salt stress response/antifungal 39 137 IPR002902 -
Pvu11g2041 671 Pfam Domain of unknown function (DUF3403) 626 671 IPR021820 GO:0004674
Pvu11g2041 671 Gene3D Transferase(Phosphotransferase) domain 1 429 634 - -
Pvu11g2041 671 CDD STKc_IRAK 359 624 - -
Pvu11g2041 671 ProSiteProfiles Protein kinase domain profile. 353 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g2041 671 SUPERFAMILY Protein kinase-like (PK-like) 338 655 IPR011009 -
Pvu11g2041 671 SMART serkin_6 353 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g2041 671 Gene3D Phosphorylase Kinase; domain 1 318 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2041 Pvu-Chr11 47288144 47291469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2041 15 671 Receptor kinase-like Gene Family AT4G05200 41.679 4.20e-178 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g2041 PK_Tyr_Ser-Thr 4.5e-49 CL0016