Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2040 ATGCCAGTCCTTGAAACTCTTGGTGGTGCTCTTTTTGGAGCTGTTCTCCAGGTCCTATTTGACAAGCTCGATTCTCATCAACTTCTCGCCTACTTTGGTGGGAGAAAGCTCGATGTGAGGATGCTGAAAAAGTTGAAGAGGAAGCTGATGGACATCAATGCTGTGATTGATGATGCAGAACAAAAGCAGTTCACTAATTCATTGGTCAGAGAATGGCTTGATGAGGTTAGAGACGCGTTGTATGATGCGGAGGATCTGTTGGAGCAAATTCACTATGAATTCTCCAACACTCAGTTGAAAGTTGAATTCCAGAGCAGTGCTAGCAAGGTAAGCAGTTTTGAATCCAAGATCATAGAACTCCTAGATGATCTACAATCTCTCTTAGACCAAAAGCTTGTTCAAGATTTCAAAATTTCTAGTGGTGTTCGATATGGGTTGGCTAATAAAGTGTTAGGAAAAAGAAATGAATCCTCATCGTTGGTTGCTCAAGAGGTTATTTATGGCAGAGATGAGGACAAACAAATTATCCTTAATTGGCTGACATCAGATAATGGAAATCAAAACCAACTTTCAATACATTCTATTGTGGGGATGGGCGGGATGGAGGGTAAATTTGCTATCAAAGCTTGGATCTGTGTTTCTGATGAATTCGATGTTTTCAAGTTAACCAGAGCAATTCTTGAGGCAATCTATAAGTCAACTGATGATAGCAGAAATCTAGAAATGGTTCAAGGACGATTGAAAGAATCTTTGACCGGAAGGAAGTTCCTCCTCGTTCTGGATGATGTATGGAATGAAGATCGAGACCAATGGAAATCATTGCAAACTCCTCTTAAATATGGGGCTAAGGGAAGTAAAATTCTTGTCACAACACGTAGTAACAAAGTTGCTTCTACCTTGGAGTCAAACAATATACACCAACTAAAGCAATTACAAGAAAATCATAGCTGGCAAGTTTTTGCTAAACATGCAGTGCAAGGTGACACCTCTAAGTTGAATTATGAGTTGAAAGAGATTGGCATGAAGATAGCTGGAAAATGCCAAGGACTGCCTTTGGCCCTAGAAACGGTAGGATCTCTATTACAGTCAAAGTCATTTGTTGCTGAGTGGGAAGGTATACTGCGAAGCAACATATGGGACTTATCGATAGAAAATAGTAAAATCATCCCTGCTTTATTGTTGAGTTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTTGCTTATTGTGCGTTATTCCCCAAAGACCATCAGTTTGACAAGGAGAGGTTAATTCTATCATGGATGGCTGAAAATTTTCTACAATGCTCTCAGCAGAATAAGTCTCCGGAAGAAGTAGGTGAACAATACTTCAATGATTTATTATCAAGGTCATTCTTTCAACGGTCAATTAGGCAGGACATAATGTATAACAAAATTATTTTTTTTGTGATGCACGACCTTCTGAATGATTTAGCAAAATATGTTTCTGGAGAAATGTGCTACAGGTTGGGTGTTGATAGACCAGGAAGTGTACCAACGACTACCCGTCACTTTTCAACGATAAAGAATCCTGTTGAATGTGATGAGTATAGGAGTTTATGTGATGCTAAAAGGCTACGAACATTTTTGTCCATATCAAGGAATTGTGGGATTTCAATACTAGACTTGATCTCCAACTTTAAATTCTTACGTCTCTTATCTTTGTCTTCCTGTCCTAACATAAAAGAGGTGCCTGACACTATAGCCGATCTTATACATCTTCGTTCATTAGACCTTACATTCACAGACATAGAGAAGCTTCCCAACTCAATATGTTCACTCTATAACTTGGAAGTGTTGAATCTCAACAACTGTATCTTTTTGAAGGAGCTGCCCTTGAATTTGCATGAACTTCCAAATTTGCGTCGCCTTGAACTTATGGGAACTTATTTAAGAAAGGATTCAGTGCTTTTTAGAAATTTGAAGAATCTTCAAGTATGGATGGGTAGGTTTGAGGTTGGCAAAACTAATAATGAGTTCAATATTCAACAACTAGGACAACTTGATCTTCATGGAAACCTATCAATTACAAATCTTGAAAATATTGTGGATCCCTATGATGCACTAGCAGCGGATATGAAGAATAAAACACATCTTGTGGTGCTCTGTTTAGAATGGGATTTGAAAGTGAAAAATGAGGATTCAATAAAAGAAAGAGAAGTACTTGAGAATTTGCAACCTTCTAAACATTTGGAGCAGTTGTCAATCTTCGGCTATTGCGGCACACAATTTCCAGGTTGGTTATCTAAAAAATTTCTATTGAATATGGTGTCCTTAACCTTAACTAACTGTAAATATTGTCAATGGTTGCCTTCCCTTGGACTTTTGACATTTCTCAAGCACTTGGAAATTAAGGGCCTTGACCAGATAGTGACAATAGATGCCGATTTTTATGGGAATATCTCTAATGCGTTTGCATCCTTGGAAATGTTGAGGCTTATTGATATGAAGGAATGGGAAGAATGGAAATGCATGTCAGGTGCTTTTCCAAGTCTTGAAAATCTTTCTCTAATAGATTGTCCTAAACTGAAAGGGCACTTGCCAGAGCACCTTCCTCATTTAAGGATTCTATTTATTAATCTGTGTGAACAACTTGCGACTTCAACTCCAAGGGCGACAGAAATTGAAAGTGTGAAGATGGAGACATCTTCATTTAATATATTAGGGCTCCTCGTATATGATACTTCTCTTGAATCCTTGTATATTTATTCTTGTTTGAGCATGAATATTCCCATAAAACATTCCTACGATTTCCTTGTAGATTTGTATATCAGTCAATGTTGCCACTCTCTCACAAACTTCCCTCTGGACTTATTCCCAAAACTTTGCAACCTTTCTTTAGACGAATGTCATAACCTACAGATGATATCACAGGCGCAACCTCATGATCATTTGAAGAGTCTGGATATTAAAAAATGCTCTGAATTTGAATCATTCCCGCATGAAGGATTATTTGCACCTCAACTAGACACGTTTTCGATTGAAGAATTGAAGAAATTGAAATCAATGCCTAAAAGCATGTCTTCCCTCCTTCCATCTCTTAATGCTCTGCGAATATACGATTGTCCAGGAGTGGAGTTGTGTGACAAATGTTTTCCATCAAATCTAGAAAACATGTATCTCTTCAATTGCTCCAAAATTGTTACCTCACTAAAGAAGGGGGTTTGGGGAACCAACCCTTCCCTAAAATCCTTGTCTATTGAAAAAGATGATGTGGAGTGTTTTCCGGGTGAAGGTTTTCTCCCACTCTCTCTTACTAATTTATGCATAAATGATTTTCCAAATCTTAAGAAACTGAACTATAGGGGTCTCTATCACCTCTCCTCTCTTCAGACAATGTTTATTCAAAATTGTCCTGTACTCCAATGCTTGCCAGAGGAAGGTCTGCCTGAATCCATTTCAGAACTCCACATTAATGACTGCCCTTTGCTTCATCAGCGATGCAAGAAAGAAGAAGGCGAAGACTGGGAAAAGATTGCTCACATTAAAGATTTATGGGTTGATGAAAACCAGTAA 3537 0.3817 MPVLETLGGALFGAVLQVLFDKLDSHQLLAYFGGRKLDVRMLKKLKRKLMDINAVIDDAEQKQFTNSLVREWLDEVRDALYDAEDLLEQIHYEFSNTQLKVEFQSSASKVSSFESKIIELLDDLQSLLDQKLVQDFKISSGVRYGLANKVLGKRNESSSLVAQEVIYGRDEDKQIILNWLTSDNGNQNQLSIHSIVGMGGMEGKFAIKAWICVSDEFDVFKLTRAILEAIYKSTDDSRNLEMVQGRLKESLTGRKFLLVLDDVWNEDRDQWKSLQTPLKYGAKGSKILVTTRSNKVASTLESNNIHQLKQLQENHSWQVFAKHAVQGDTSKLNYELKEIGMKIAGKCQGLPLALETVGSLLQSKSFVAEWEGILRSNIWDLSIENSKIIPALLLSYYHLPSHLKRCFAYCALFPKDHQFDKERLILSWMAENFLQCSQQNKSPEEVGEQYFNDLLSRSFFQRSIRQDIMYNKIIFFVMHDLLNDLAKYVSGEMCYRLGVDRPGSVPTTTRHFSTIKNPVECDEYRSLCDAKRLRTFLSISRNCGISILDLISNFKFLRLLSLSSCPNIKEVPDTIADLIHLRSLDLTFTDIEKLPNSICSLYNLEVLNLNNCIFLKELPLNLHELPNLRRLELMGTYLRKDSVLFRNLKNLQVWMGRFEVGKTNNEFNIQQLGQLDLHGNLSITNLENIVDPYDALAADMKNKTHLVVLCLEWDLKVKNEDSIKEREVLENLQPSKHLEQLSIFGYCGTQFPGWLSKKFLLNMVSLTLTNCKYCQWLPSLGLLTFLKHLEIKGLDQIVTIDADFYGNISNAFASLEMLRLIDMKEWEEWKCMSGAFPSLENLSLIDCPKLKGHLPEHLPHLRILFINLCEQLATSTPRATEIESVKMETSSFNILGLLVYDTSLESLYIYSCLSMNIPIKHSYDFLVDLYISQCCHSLTNFPLDLFPKLCNLSLDECHNLQMISQAQPHDHLKSLDIKKCSEFESFPHEGLFAPQLDTFSIEELKKLKSMPKSMSSLLPSLNALRIYDCPGVELCDKCFPSNLENMYLFNCSKIVTSLKKGVWGTNPSLKSLSIEKDDVECFPGEGFLPLSLTNLCINDFPNLKKLNYRGLYHLSSLQTMFIQNCPVLQCLPEEGLPESISELHINDCPLLHQRCKKEEGEDWEKIAHIKDLWVDENQ* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2040 1178 Pfam Rx N-terminal domain 13 105 IPR041118 -
Pvu11g2040 1178 Gene3D - 310 394 IPR042197 -
Pvu11g2040 1178 Gene3D Ribonuclease Inhibitor 515 643 IPR032675 -
Pvu11g2040 1178 SUPERFAMILY L domain-like 901 1167 - -
Pvu11g2040 1178 PANTHER DISEASE RESISTANCE PROTEIN RP 32 991 IPR044974 GO:0006952
Pvu11g2040 1178 PANTHER OS05G0414200 PROTEIN 32 991 - -
Pvu11g2040 1178 PRINTS Disease resistance protein signature 250 264 - -
Pvu11g2040 1178 PRINTS Disease resistance protein signature 347 361 - -
Pvu11g2040 1178 PRINTS Disease resistance protein signature 599 615 - -
Pvu11g2040 1178 SUPERFAMILY L domain-like 477 876 - -
Pvu11g2040 1178 Gene3D Ribonuclease Inhibitor 1038 1178 IPR032675 -
Pvu11g2040 1178 Gene3D - 31 129 - -
Pvu11g2040 1178 Gene3D Ribonuclease Inhibitor 663 887 IPR032675 -
Pvu11g2040 1178 Gene3D - 153 308 IPR027417 -
Pvu11g2040 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 410 IPR027417 -
Pvu11g2040 1178 Gene3D - 395 488 IPR036388 -
Pvu11g2040 1178 Gene3D Ribonuclease Inhibitor 890 1037 IPR032675 -
Pvu11g2040 1178 Coils Coil 42 62 - -
Pvu11g2040 1178 Pfam NB-ARC domain 201 374 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2040 Pvu-Chr11 47266079 47269652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2040 549 653 Receptor kinase-like Gene Family AT4G13920 35.455 3.99e-07 52.8