Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2039 ATGCCAGTCATAGAAACGCTTGGTGGTGCTCTTTTTGGTGCTGTTCTCCAGGTCCTATTTTACAAGCTGGATTCTCATCAAATTCTGGACTACTTTTGTGAAAGAAATATCGACGAGAAGCTGCTGAAGAAGTTGAAGAGGAAGCTGATGGACATCAATGCTGTGATTGATGATGCAGAGCAAAAACAGTTCACTAATTCATTGGTCAAAGAATGGCTTGACGAGGTCAGAGACGCTTTGTATGACGCGGAGGATCTGTTGGAGCAAATCGACTATGAATTCTCCAAAACTGAGTTGAAAGCTGAATTCCAGAGCAGTGCTAGCAAGGTAAGCAGTTTTCAATCCGAGATGTTAGAACTCCTAGATGAACTAGAATCTCTCTTAAACCAAAAGATTGTTCAAGATTTCAAAATTTCTAGTGGTTTTGGATCTGGGTTGGCTAATAACGTGTCAGGGAAAATAAATGAATCCTCATCGTTGGTGGCTCAAGAGGTTATTTATGGCAGAGACGAGGACAAAGAAATGATCCTTAAGTGGCTTACTTCTGAGAGTAACAATCATAACCAACTGTCAATACTTTCTATTGTGGGTATGGGCGGGATGGGTAAGACCACACTTGCTCAACATGTATACAACAACCCTATGATAGAGGGTAAATTTGCTATCAAAGCCTGGGTCTGCGTTTCTGATGAATTCGATGTTTTCAAGTTGACTAGAGCAATTCTTGAGGCAATCCATAAGTCAACTGACGATAGCAGAAACCTAGAAATTGTTCAGGGACGATTGAAAGAAGAATTGAATGGAATGAAGTTCCTTCTGGTTCTAGATGATGTCTGGAACGAAGACAGAGACCAATGGAAATTATTGCAAACTCCTCTTAAATATGGGGCTAAGGGAAGTAAAATTCTTGTAACAACACGCAATAACAAAGTTGCTTCTACCTTGGAGTCAAACAATATACACCAACTAAAGCAATTACAAGAAGATTACAGCTGGCAACTTTTTGCTAAACATGCAGTTCAAGATGACAACTCGAAGTTGAATTATGAGTTGAAGGAGATTGGCATGAAGATAGTAGAAAAGTGCCAAGGACTACCCTTGGCCCTTGAAACAGTAGGATGTCTTTTACAGTCAAAGTCATCTACTGCAGAGTGGGAAGTTGTAATGAGAAGCAACATATGGGACTTACCGATAAAAAATAGTAAAATCATTCCTGCTTTGTTGTTGAGCTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTTGCTTATTGTGCGTTATTCCCCAAAGACTATAAGTTTGAGAAGGAGAGCTTAATTCTCTCATGGATGGCTCAGAATTTCCTACAATGTTCCCAGCAGAGTGAGTCTCCAGAAGAAATAGGTGAACAATACTTCAATGATCTACTTTCAAGGTCATTCTTTCAGCAGTCAGTTAAGTACAAGGACACATGTTTCGTGATGCACGACCTTCTCAATGATTTAGCAAAATATGTTTCGGGCGAGATCTGCTTTAGGTTGGGTGTTGATAGACCAGGAAGCATCCCAAAGACAACCCGTCACTTTTCAACCGTAAAGAATCGTGTTGAATGTCATGAGTATAGGAGTTTATATGATGCTAAAAGGCTACGGACATTTCTTTCCATATCTACTGATTGCGGGATGTCGATACAAGAGTTGATCTCCAACTTTAAGTTCTTACGGGTCCTATCTTTGGATTTGTGTGATGACATAAAAGAGGTGCCTGACAACATAGGCAATCTTATACATCTTCGTTCACTAGACCTTTCGGGTACTGACATAGAGAGACTTCCCGATTCAACATGTTCACTTAGTAACTTGCAAGTGTTGAAGCTGAACAATTGTTTCAATTTGCGAGAGCTGCCCTCGACTTTGTATGAACTCCCAAATTTGCGCCGCCTTGAACTTATGGGAACTTCTTTAAGAAAGGCTCCAGTGCTTTCTAGAAAATTGAAGAATCTTCAAGTATGGATGAGTAGGTTTGAGGTTGGCAAAAGTAGTGAGTTCAATATTCAACAACTAGGACAACTTGATCTTCATGGAAAGCTATCAATTAGGAATCTTGAAAATATTGTGAATCCCTTTGATGCATTGGCAATGGATCTGAAGAATAAATCACATCTTGTGGGGTTAAATTTAGAATGGAATTTGAAGCGGAACAATGAAGATGCATTAAAAGAAAGAGATGTACTAGAATATCTGCAACCTTCCCGACATTTGGAGCACTTGTCAATTGGTGACTATGGTGGCACACAATTTCCACCTTGGTTATCTGATAATTCTCTATCGAGTGTGGTGTCCTTAACCTTGGTGGGTTGTAAATATTGCCAACAGTTGCCTTCCCTTGGACTTTTGACATTTCTCAAGCACTTGACAATTCGTGGCCTTGATTGGATTGGAAGGATAGATGCTGATTTTTACGGGAATAGCTCTTCTGCATTTGCATCCTTGGAAACATTGACCTTTGATGATATGAAGGAATGGGAAGAATGGCAATGCATGACGGGTGCTTTTCCAAGTCTTCAACGTCTTTTTGTGAAGAATTGTCCCAAACTGAAAGGGCACTTGCCAGAACACCTTTTTCATTTAAAAGAGCTAACTATTGATGACTGCCAACAACTTGTGGCTTCGATTCCCAAGGCTGTAGAAATTAAAGGTGTGAACATGAAGCCATCTCCATTTGATATGATTGGCCACCTCGTATCTCATACTCGTCTTCAAACCTTGAGTATTTACCGTTGTCGGGGCATGAATATTCCCATAAACCATTGCTACCATTTACTTGTAAAATTGGATATCATTCAATCTTGTGACTCTCTCACAAACTTTCCTCTAGACTTATTCCCAAATCTCTGCGACCTTGGTTTAAACGGATGTCATAACTTACAAATGATATCACAACGACATCCTCATGGTCATTTGAAGAGTCTGACTATTACAGAATGCTCTGAATTTGAATCATTTCCCAATGAAGGATTATTTGCACCTCAGCTAGAGACATTTTGGATTGAGAAATTGGAGAAACTCAAATCAATGCCTAAACGCATGTCTGCCCTCCTTCCATCTCTTGATGATTTGTCCATACACAATTGTGCAGAAGTGGAGTGGTCTGATGGATGTTTGCCATCAAATCTAAAAGAAATGCATCTCTTGAATTGTTCGAAACTTGTTGCCTCACTAAAGAAGGAGGTTTGGGGAACCAACCCTTCCATAGAATTTTTGTCAATTCAAGAAGAGGATGTGGAGAGTTTTCCTGATGATGGTGAAGGTTTGCTCCCAGTGTCTCTAACTACTCTAAACATAAAAGATTGTCCAAATCTAAAACAACTGCACTACAGGGGTCTCTGTCACCTCTCCTCTCTTCAGACAATGATTCTTCAAAATTGTCCTGTACTCCAATACTTGCCGAAGGAGCTGTCCGAATCCATTTCCACTCTCCAAATTGAAGACTGCCCGTTGCTCAAACAGCGGTGCAAGAAACAATAA 3507 0.4003 MPVIETLGGALFGAVLQVLFYKLDSHQILDYFCERNIDEKLLKKLKRKLMDINAVIDDAEQKQFTNSLVKEWLDEVRDALYDAEDLLEQIDYEFSKTELKAEFQSSASKVSSFQSEMLELLDELESLLNQKIVQDFKISSGFGSGLANNVSGKINESSSLVAQEVIYGRDEDKEMILKWLTSESNNHNQLSILSIVGMGGMGKTTLAQHVYNNPMIEGKFAIKAWVCVSDEFDVFKLTRAILEAIHKSTDDSRNLEIVQGRLKEELNGMKFLLVLDDVWNEDRDQWKLLQTPLKYGAKGSKILVTTRNNKVASTLESNNIHQLKQLQEDYSWQLFAKHAVQDDNSKLNYELKEIGMKIVEKCQGLPLALETVGCLLQSKSSTAEWEVVMRSNIWDLPIKNSKIIPALLLSYYHLPSHLKRCFAYCALFPKDYKFEKESLILSWMAQNFLQCSQQSESPEEIGEQYFNDLLSRSFFQQSVKYKDTCFVMHDLLNDLAKYVSGEICFRLGVDRPGSIPKTTRHFSTVKNRVECHEYRSLYDAKRLRTFLSISTDCGMSIQELISNFKFLRVLSLDLCDDIKEVPDNIGNLIHLRSLDLSGTDIERLPDSTCSLSNLQVLKLNNCFNLRELPSTLYELPNLRRLELMGTSLRKAPVLSRKLKNLQVWMSRFEVGKSSEFNIQQLGQLDLHGKLSIRNLENIVNPFDALAMDLKNKSHLVGLNLEWNLKRNNEDALKERDVLEYLQPSRHLEHLSIGDYGGTQFPPWLSDNSLSSVVSLTLVGCKYCQQLPSLGLLTFLKHLTIRGLDWIGRIDADFYGNSSSAFASLETLTFDDMKEWEEWQCMTGAFPSLQRLFVKNCPKLKGHLPEHLFHLKELTIDDCQQLVASIPKAVEIKGVNMKPSPFDMIGHLVSHTRLQTLSIYRCRGMNIPINHCYHLLVKLDIIQSCDSLTNFPLDLFPNLCDLGLNGCHNLQMISQRHPHGHLKSLTITECSEFESFPNEGLFAPQLETFWIEKLEKLKSMPKRMSALLPSLDDLSIHNCAEVEWSDGCLPSNLKEMHLLNCSKLVASLKKEVWGTNPSIEFLSIQEEDVESFPDDGEGLLPVSLTTLNIKDCPNLKQLHYRGLCHLSSLQTMILQNCPVLQYLPKELSESISTLQIEDCPLLKQRCKKQ* 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2039 1168 Pfam Leucine rich repeat 590 648 IPR001611 GO:0005515
Pvu11g2039 1168 Pfam NB-ARC domain 170 390 IPR002182 GO:0043531
Pvu11g2039 1168 Coils Coil 110 130 - -
Pvu11g2039 1168 Pfam Rx N-terminal domain 14 105 IPR041118 -
Pvu11g2039 1168 Gene3D Ribonuclease Inhibitor 526 893 IPR032675 -
Pvu11g2039 1168 PRINTS Disease resistance protein signature 192 207 - -
Pvu11g2039 1168 PRINTS Disease resistance protein signature 265 279 - -
Pvu11g2039 1168 PRINTS Disease resistance protein signature 362 376 - -
Pvu11g2039 1168 PRINTS Disease resistance protein signature 609 625 - -
Pvu11g2039 1168 PANTHER OS05G0414200 PROTEIN 32 995 - -
Pvu11g2039 1168 SUPERFAMILY L domain-like 487 880 - -
Pvu11g2039 1168 SUPERFAMILY L domain-like 907 1162 - -
Pvu11g2039 1168 Gene3D Ribonuclease Inhibitor 894 1168 IPR032675 -
Pvu11g2039 1168 Gene3D - 325 409 IPR042197 -
Pvu11g2039 1168 Gene3D - 17 129 - -
Pvu11g2039 1168 PANTHER DISEASE RESISTANCE PROTEIN RP 32 995 IPR044974 GO:0006952
Pvu11g2039 1168 Gene3D - 410 498 IPR036388 -
Pvu11g2039 1168 Coils Coil 42 62 - -
Pvu11g2039 1168 Gene3D - 149 321 IPR027417 -
Pvu11g2039 1168 CDD AAA 167 291 - -
Pvu11g2039 1168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 425 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2039 Pvu-Chr11 47246866 47252167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2039 193 389 WRKY Transcription Factor Family AT5G45050 28.910 7.92e-11 64.7