Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2037 ATGGCTGAGCAACGATTGATGAGTGATGTCGCTTCTTCCTCTAACTCTTCTTCTACGACGTCTTGTAAAAAATATGATGTTTTTCTAAGCTTTCGAGGTGAGGACACTCGCATGAACTTCACCAGCCATCTTTATGAGGCTTTGAAGCACAAAAAAGTAGAAACCTATATTGACTACAAGCTTGAGAAGGGAGATGAAATCTCACAGGGACTCATCAAAGCAATCGAAGATTCTCATGTATCGATTGTGATCATGTCAGAGAACTATGCTTCCTCAAAGTGGTGCCTAGAAGAACTCAGCAAGATTCTTGAATGCCAGAAAAACCAAGGACAAATTGTGATTCCAGTGTTTTACAACATAGACCCATCTCATGTGAGGAAGCAGAGTGGGAGCTATGAGCAAGCCTTTGTAAAGCATCAGGAAGACCTCAGGTGCAACAAATGGAGAACTGCTCTCACTGAAGTAGCCAATTTATCTGGGTGGGATTCTCGAAACAGGACTGAATCTAAACTCCTTATGGACATTGTTGGAGACATTTTGCGAAAACTGACTGCTAGATACCCAAATCAACTTAAAGGGCTGGTTGGAATTGAAGAAAATTATGAACAAATTGAATCATTACTAAGAATTGGGTCAAGAGAAGTTAGAATCCTGGGAATATGGGGCATGGGTGGCATAGGAAAGACCACCCTTGCTACTGCTTTGTATGCACAACTTTCTCCTGAGTTCGAAGGTGGTTGCTTCCTCACAAATGTAAGGGAAAATTCAAGTAGGCCTGGTGGACTTGAAGCTTTACACAAAAAGCTTTATACTGAGTTGTTAGGTAATGAAAGTCATTGTTTTGATGCACCCCTTTTAGTACCCCAGTTTGTCATGCATAGGCTTGGACATAAAAAAGTCTTCATTGTATTGGATGATGTGTCTACCTGTGAGCAATTAGAACATCTTATTAAAGATTATGGTTTGTTGGGACCAGGAAGTAGAGTCATTGTTACAACCAGAGACCAGCAAATTTTTAGACCAAATGATGAGGTATATGAGGTGAAGAAATTGAGTTTTGATCGGTCTCTCGAACTTTTCAGTTTGACTGTCTTTGAAGAAAACACACCTAAACAAGGACACGAAGATTTATCAAGAAAGGCAGTTTCCTATTGCAAAGGTATTCCATTGGCTTTGAAAGTTCTAGGTGCAAGTTTACGTCGAAGAAGTAAAGAGGCATGGGAAAGTGAATTGAGAAAACTCAAAAAGATCTCAAATAAGGAAATTAATAATGTATTAAAGTTAAGTTATGATGGCTTAGATCGTTCTCAAAAGGACATCTTTCTAGATATTGCATGCTTCTTCAAAGGAAAAGATAGAGATTGGGTCACAAATATATTGGAAGCTTGTGATTTCTTTCCAGCATCTGGAATAGAAGTTCTTTTAGATAAAGCTCTAGTAACAATTTCAGGTTGCAGTATAGAAATGCATGACCTAATACAAGAAATGGGTCGAGAAATTGTTGATCAAGAATCTATTAAAGAGCCTGGAAGGCGAAGTCGATTGTGGAGACCGGAGGAAGTGCACGAAGTATTGAAACATAACTTGGGAACTGAAGTTGTTGAATGCATAACTTTAGATACGTGTAATCTAAACAGGGATCTAAATTTGAGCTCTAATTGCTTCACAAAGATGGTTAACTTGAGATTTCTTAACATACATTGTTCATTCTGGTCAACCCGATTTCATGTGTACCTTCCTAGCGGTCTGGAGTCAGTTTCTGATAAATTGAGGTACTTTTTTTGGGATGGATTTTGTCATGAGTCTTTGCCGTCTAACTTTCATGCAGAAGATCTTGTTGAGCTTTACATGTATGGTAGCAAGCTTAAAAAGCTTTGGGATGGTGTTCAGAACCTCGTGAACTTGCAAAAAATTTACCTTGGAGCCTCTAGGGATCTGGTTGAGATTCCTGACTTATCTAAGGCCAAAAAACTTAGATCAATTAATCTCTCTCAGTGTGAAAGCTTGCGTAAGCTCCACACTTCCATATCATCTCTCCCTAAGCTTACATTCTTGGAATTGAGTGGCTGTACAGGGATTGAAAACCTGAATGTTCATTCAAAATATCTGCAGAGGTTGCACCTCGAAGGTTGTTCATCTCTCAAGGAGTTCTCAGTGACATCACATGAAATGACGGTTTTGGACTTATCTTATACTGCTATATGTGCATTGCCATCATCAATTCAATTTAATAGGAAACTTACTCAACTTTGGCTAAAGGGTTGCAGCAATTTTGGCATGTTACCGAATGTTTCGGAACCGGGATTGATTACAGCGCCAGACAATTTTGACTGCACTCAACACAATCTATCATTCTTACAATCACTCCCCAACATCATTGGCCACTTGTTCTGTTTAAAAATTTTAGATTTAAGCGGAACTATTGTGGAGAGTTTGCCTGAAAGCATAAAAAACCTTTCAATGATGACAGTATTGAAGTTAGATGATTGCAGGAAACTGGTGTCTCTATCAGAGCTTCCATCATCCTTGAATATTTTGACAGCCTATAACTCCACTTCTTTGGAGACAGTCTTCAGTCAATTACTTGTTTTTGAACACATGTTGCAGAGTTGCACGCCCTGCTTATCCAAACAATATTATCCTAAGCAATTTGAGGGTGGATGTGTCGTTTTCCCTGGAGACCATATCATGATGAATCAATGCGGATTTCATACTGTAGATAGTTCAATAACTATTCCTTATCTCTCACTACCTGAATTGTGTGGTTTCATCTGTTGTGTCATTGTTTCTGAGGGATCAGTAGAGGGACATTTTTCGTGTTCTATCTATCAAGATAGCAAACAAGTGGGAATGGACGAAGGCAAATTATTGCACACATCTTTAATATCAGATCACGTGGCATTTTTGTTTGTTGAAACATGTGACCATCTTAGTGAAATACCTTTTAAGTTTGAATTTAATTACGGTCAGAAAACGGAAAAAGTTACAATCAAAGAGTGTGGGGTCTTCCCAGTGTATGCCACAGAATCAGGGTTGAAGTTGTTTGAATTGGAATCTGTTACTCAAATCTTCAATGAGTCACAATCCAGAGCAATTGGAGTTGGAGTTAGATGCTCCAACGCTGAAAATGGATTAGAATCCTTGGTTGAAGTATCTAATAACGAGTCACAGCTGACAGAGATTGGAGTTGATGGATCAAGTAATGAAAATGGAAATGAAAATGAGTGGGAAGAACTTCTTCATGTGATTACTTCATCGGTTTTCTTTTGA 3270 0.3865 MAEQRLMSDVASSSNSSSTTSCKKYDVFLSFRGEDTRMNFTSHLYEALKHKKVETYIDYKLEKGDEISQGLIKAIEDSHVSIVIMSENYASSKWCLEELSKILECQKNQGQIVIPVFYNIDPSHVRKQSGSYEQAFVKHQEDLRCNKWRTALTEVANLSGWDSRNRTESKLLMDIVGDILRKLTARYPNQLKGLVGIEENYEQIESLLRIGSREVRILGIWGMGGIGKTTLATALYAQLSPEFEGGCFLTNVRENSSRPGGLEALHKKLYTELLGNESHCFDAPLLVPQFVMHRLGHKKVFIVLDDVSTCEQLEHLIKDYGLLGPGSRVIVTTRDQQIFRPNDEVYEVKKLSFDRSLELFSLTVFEENTPKQGHEDLSRKAVSYCKGIPLALKVLGASLRRRSKEAWESELRKLKKISNKEINNVLKLSYDGLDRSQKDIFLDIACFFKGKDRDWVTNILEACDFFPASGIEVLLDKALVTISGCSIEMHDLIQEMGREIVDQESIKEPGRRSRLWRPEEVHEVLKHNLGTEVVECITLDTCNLNRDLNLSSNCFTKMVNLRFLNIHCSFWSTRFHVYLPSGLESVSDKLRYFFWDGFCHESLPSNFHAEDLVELYMYGSKLKKLWDGVQNLVNLQKIYLGASRDLVEIPDLSKAKKLRSINLSQCESLRKLHTSISSLPKLTFLELSGCTGIENLNVHSKYLQRLHLEGCSSLKEFSVTSHEMTVLDLSYTAICALPSSIQFNRKLTQLWLKGCSNFGMLPNVSEPGLITAPDNFDCTQHNLSFLQSLPNIIGHLFCLKILDLSGTIVESLPESIKNLSMMTVLKLDDCRKLVSLSELPSSLNILTAYNSTSLETVFSQLLVFEHMLQSCTPCLSKQYYPKQFEGGCVVFPGDHIMMNQCGFHTVDSSITIPYLSLPELCGFICCVIVSEGSVEGHFSCSIYQDSKQVGMDEGKLLHTSLISDHVAFLFVETCDHLSEIPFKFEFNYGQKTEKVTIKECGVFPVYATESGLKLFELESVTQIFNESQSRAIGVGVRCSNAENGLESLVEVSNNESQLTEIGVDGSSNENGNENEWEELLHVITSSVFF* 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2037 1089 ProSiteProfiles TIR domain profile. 23 183 IPR000157 GO:0007165
Pvu11g2037 1089 SMART till_3 24 158 IPR000157 GO:0007165
Pvu11g2037 1089 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 161 IPR035897 -
Pvu11g2037 1089 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 444 IPR027417 -
Pvu11g2037 1089 Pfam NB-ARC domain 204 426 IPR002182 GO:0043531
Pvu11g2037 1089 Gene3D Ribonuclease Inhibitor 725 872 IPR032675 -
Pvu11g2037 1089 Gene3D Ribonuclease Inhibitor 525 724 IPR032675 -
Pvu11g2037 1089 Pfam Leucine Rich Repeat 611 630 IPR011713 -
Pvu11g2037 1089 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 1026 - -
Pvu11g2037 1089 PRINTS Disease resistance protein signature 217 232 - -
Pvu11g2037 1089 PRINTS Disease resistance protein signature 294 308 - -
Pvu11g2037 1089 PRINTS Disease resistance protein signature 385 399 - -
Pvu11g2037 1089 PRINTS Disease resistance protein signature 677 693 - -
Pvu11g2037 1089 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Pvu11g2037 1089 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 1026 IPR044974 GO:0006952
Pvu11g2037 1089 MobiDBLite consensus disorder prediction 7 21 - -
Pvu11g2037 1089 MobiDBLite consensus disorder prediction 1 21 - -
Pvu11g2037 1089 SUPERFAMILY L domain-like 489 846 - -
Pvu11g2037 1089 Pfam TIR domain 24 194 IPR000157 GO:0007165
Pvu11g2037 1089 Gene3D - 350 434 IPR042197 -
Pvu11g2037 1089 Gene3D - 186 346 IPR027417 -
Pvu11g2037 1089 Gene3D - 21 185 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2037 Pvu-Chr11 47218675 47222794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2037 20 832 WRKY Transcription Factor Family AT4G12020 33.735 1.72e-110 377