Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2036 ATGCCAGTCCTTGAAACACTTGGTGGTGCTTTTTTTGGTGCTGTTCTCCAGGTCTTATTTCACAAGCTCGATTCTCATAAACTTCTCCACTACTTTCGTGGGAGAAAGCTCGATGTGAGGATGCTGAAAAAGTTGCAGAGGAAGCTGATGGACATCAATGCTGTCATTGATGATGCAGAACAAAAGCAGTTCACTAATTCAATGGTCAGAAAATGGCTTCATGAGGTCAGAGATGCGTTGTATGATGCAGAGGATCTGTTGGAGGAAATAGACTATGAATTCTCCAAAAGTGAGTTGAAAGCTGAATTCCAGTGCAGTGCTAGCAAGGTAAGCAGTATTGAATCCAAGATGATACAACTCCTAGATGATCTAGAATCTCTCTTAGATCAAAAGCTAGTTCAAGATTTCAAAATTTCTAGTGGTGTTGGATCTGGGTTGGCTAATAGCGTGTTAGGGAAAAGAAATGAATCCTCATCATTGGTGACTCAAGAAGTTATTTATGGCAGAGATGATGACAAAAAAATTATCCTTAATTGGCTGACATCAAACAATGGAAATCATAACCAGCTTTCAATACTTTGTATTGTGGGTATGGGTGGGATGGGTAAGACCACACTTGCTCAACATGTATACAATGACCTAATCATAGAGGCTAAATTTGCTATCAAAGCCTGGGTCTGCGTTTCTGATGAATTCGATGTTTTCAAGTTAACTAAAGCAATTCTTGAGGGAATCCATCAGTCAACTGATGATAGCAGAAACCTTGAAATGGTTCAGGGACGATTGAAAGAATCGTTGACAGGAAGGAAGGTTCTTCTCGTTCTGGATGATGTTTGGAACGAAGACCGAGACCAATGGAAGTCATTGCAAACTTCTCTTAAATATGGTGCTAAGGGAAGTAAAATTCTTGTCACAACACGCAATAACGAAGTTGTTTCTACTTTGGAGTCAAACAATATACACCAACTAGAGAAATTACAAGAAAATTACAGCTGGCAAGTTTTTGCTAAACATGCAATCCAAGATGACAACTCTAAGTTGAATTCTGAATTGAAGGAGATTGGCATGAAGATACTTGAAAAGTGTCAAGGATTGCCTTTGGCCCTTGAAACAGTAGGATCTCTTTTACAGTCAAAGTCATCTGTTGGAGAGTGGGAAGGTGTACTGAGAAGCAACATATGGGACTTACCAATAGAAAATAGTAAAATTATTCCCGCTTTGTTATTGAGCTATTACCATCTTCCCTCTCATCTCAAGAGATGTTTCGCTTATTGTGCGGTATTCCCCAAAGGCCATGTGTTTGTCAAGGAGAGCTTAATTCTATCATGGATGGCTGAAAATTTTCTACATTCCTATCAGCAGAGTAAGTCTCTCGAAGATGTAGGTGAACAATACTTCAATGATCTATTATCAAGGTCATTCTTTCAGCGGTCAATTTGGCTATTCGATATAGATTTTGTAATGCATGACCTTCTGAATGATTTAGCAAAATATGTTTCTGGTGAAATGTGCTATAGGTTGGGTGTTGATAGACCAGGAAGCGTACCAACGACTACTCGTCACTTTTCAATGGTAAAGAATCATGTTGATTGTGATGAGTATAGGAGTTTATGTGATGCTAAAAGGCTACGAACATTTCTGTGCATATCTAGGAATTGTGGGATGTCAATACAAGACTTGATCTCCAACTTTAAGTGCTTACGCCTCTTATCTTTGTCTAAGTGTCAAAACATAAAAGAGGTGCCTGACACTATAGCCGATCTTATACATCTTCGTTCATTAGACCTTTCATTAACACGCATAAAGAGACTTCCCAACTCAATATGTTCACTTTATAACTTGCAAGTGTTGAAGCTCGAGAAGTGTATCCATTTGAAGGAGCTTCCCTCGACTTTGCATGAACTCCCAAATTTGCGTCGCCTTGAACTTACGAAAACTTATTTAAGAAAGGCCACAATGCTTTTAGGAAATTTGAAGAATCTTGAAGTATCAGAGTTGTCAATTAAAAATCTTGAAAATATTGCGGATTCCTGTGATGCATTAGCAGCAAATTTGAGGAATAAAAAACATCTTATGATTTTACATTTAGAATGGGATTTGAAAGTGAAAAATGAAGATTCAATAAAAGAAAGAGAAGTACTTGAGAATCTGCAACCTGCAAGACATTTGGAGCAATTGTCAATCACCGGCTATTCTGGCACACAATTTCCAGGTTGGTTATCTGATAAATTTCTATTGAATATGGTGTCCTTAACCTTAAATAACTGTAAATATTGCCAATGGTTACCTTCCCTTGGACTTTTGACATTTCTCAAGCGCTTGGAAATTGGTGGCCTTGATCGAATAGTGAGGATAGATGCCGATTTTTATGGAAATATCTCTTCTGCATTTGCATCCTTGGAAACGTTGAGGTTTAATGACATGAAGGAATGGGAAGAATGGCAATGCATGACAGGTGCTTTTCCACGTCTTCATAGTCTTTTTGTAATTAAGTGTCCCAATTTGAAAGGGAACTTTCCAGAGCACCTTCCTTGTTTAACGATTCTATGTATTAATGGGTGCGAACAACTTGTGGCTTCGACTCCTAGGACAGAAGAAATTGAAGGTGTGAATATGGAGACTTGTTCATTTGATATGCTCCTATCTCATCCTCTTCATTCCTTAGGTATTTATTGTTGTCCGGGCATGAATATTCCCATGAACCATGGTTACCCTTTCCTTGTAGAATTGCGTATCATTCAATGTTGTGACTCTCTCACTAACTTCCCTCTAGACTTGTTCCCAAAACTCTGTTCCCTTAGATTAGACGGATGTTATAACCTACAGATGATAACACAGGGGCACCCTCACGGTCATTTGAAGAGTCTGAGTATTCGAAAATGCTCTGAATTGGAATTATTTCCCGATGAAGGATTATTTGCACCTCAGCTAGAGACATTTTCGATTGAAGGATTAGAGAAATGGAAATCAATGCCTAAACGCATGTACGCCCTCTTTCCATCTCTGAATCGTCTGTCTATAAAGGATTGTCCAAGTGTGGAGTTGTCTGACGGATGTCTGCCATTAAATCTAAAACACATCTCTCTCTTGAATTGCTCCAAACTTGTTGCCTCACTAAACAAGGGGGTTTGGGGAACCAACCCTTCCATAAAAGTTTTGTCCATTGAAGAAAAGGGTATGGAGTGTTTTCCGGGTGAAGGTTTTCTTCCAGTCTCCCTTACTCAGCTACACATAAAAGATTGTCCAAATCTTAAGAAACTGGACTACAGGGGCCTCTGTCACCTCTCCTCTCTTCAGAAATTGTTTCTTCGTAATTGTCCAATACTCCAATGCTTGCCAAAGGAGGGTCTGCCGGAATCCATTTCACAACTCGAAATTACAAATTGTCTGATGCTCAAACAATGGTACAAGAAAGAAGAAGGCGAAGACTGGAAAAAGATTGCTCACATTAGAACTATGTTTTCATCAGAGATTGATACATCATTAATGGAAATATTTTTGGAAGTTTTTGAAGCAGACATTTCCACTCTTCCAACTGAGAATGCAGGTTTGTTGGGTTTTGGAATGGTCATCACATCACTTGCCAACAATACCATGACAGTGGACATGGTTGGTCTAATTGTTGCTGCTTCTTGA 3636 0.3897 MPVLETLGGAFFGAVLQVLFHKLDSHKLLHYFRGRKLDVRMLKKLQRKLMDINAVIDDAEQKQFTNSMVRKWLHEVRDALYDAEDLLEEIDYEFSKSELKAEFQCSASKVSSIESKMIQLLDDLESLLDQKLVQDFKISSGVGSGLANSVLGKRNESSSLVTQEVIYGRDDDKKIILNWLTSNNGNHNQLSILCIVGMGGMGKTTLAQHVYNDLIIEAKFAIKAWVCVSDEFDVFKLTKAILEGIHQSTDDSRNLEMVQGRLKESLTGRKVLLVLDDVWNEDRDQWKSLQTSLKYGAKGSKILVTTRNNEVVSTLESNNIHQLEKLQENYSWQVFAKHAIQDDNSKLNSELKEIGMKILEKCQGLPLALETVGSLLQSKSSVGEWEGVLRSNIWDLPIENSKIIPALLLSYYHLPSHLKRCFAYCAVFPKGHVFVKESLILSWMAENFLHSYQQSKSLEDVGEQYFNDLLSRSFFQRSIWLFDIDFVMHDLLNDLAKYVSGEMCYRLGVDRPGSVPTTTRHFSMVKNHVDCDEYRSLCDAKRLRTFLCISRNCGMSIQDLISNFKCLRLLSLSKCQNIKEVPDTIADLIHLRSLDLSLTRIKRLPNSICSLYNLQVLKLEKCIHLKELPSTLHELPNLRRLELTKTYLRKATMLLGNLKNLEVSELSIKNLENIADSCDALAANLRNKKHLMILHLEWDLKVKNEDSIKEREVLENLQPARHLEQLSITGYSGTQFPGWLSDKFLLNMVSLTLNNCKYCQWLPSLGLLTFLKRLEIGGLDRIVRIDADFYGNISSAFASLETLRFNDMKEWEEWQCMTGAFPRLHSLFVIKCPNLKGNFPEHLPCLTILCINGCEQLVASTPRTEEIEGVNMETCSFDMLLSHPLHSLGIYCCPGMNIPMNHGYPFLVELRIIQCCDSLTNFPLDLFPKLCSLRLDGCYNLQMITQGHPHGHLKSLSIRKCSELELFPDEGLFAPQLETFSIEGLEKWKSMPKRMYALFPSLNRLSIKDCPSVELSDGCLPLNLKHISLLNCSKLVASLNKGVWGTNPSIKVLSIEEKGMECFPGEGFLPVSLTQLHIKDCPNLKKLDYRGLCHLSSLQKLFLRNCPILQCLPKEGLPESISQLEITNCLMLKQWYKKEEGEDWKKIAHIRTMFSSEIDTSLMEIFLEVFEADISTLPTENAGLLGFGMVITSLANNTMTVDMVGLIVAAS* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2036 1211 SUPERFAMILY L domain-like 487 858 - -
Pvu11g2036 1211 Coils Coil 1211 1211 - -
Pvu11g2036 1211 Gene3D - 325 409 IPR042197 -
Pvu11g2036 1211 Gene3D Ribonuclease Inhibitor 908 1115 IPR032675 -
Pvu11g2036 1211 Coils Coil 110 130 - -
Pvu11g2036 1211 Gene3D Ribonuclease Inhibitor 514 879 IPR032675 -
Pvu11g2036 1211 Gene3D - 410 498 IPR036388 -
Pvu11g2036 1211 Gene3D - 23 128 - -
Pvu11g2036 1211 Coils Coil 668 688 - -
Pvu11g2036 1211 PANTHER DISEASE RESISTANCE PROTEIN RP 32 967 IPR044974 GO:0006952
Pvu11g2036 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 425 IPR027417 -
Pvu11g2036 1211 PRINTS Disease resistance protein signature 192 207 - -
Pvu11g2036 1211 PRINTS Disease resistance protein signature 265 279 - -
Pvu11g2036 1211 PRINTS Disease resistance protein signature 362 376 - -
Pvu11g2036 1211 PRINTS Disease resistance protein signature 562 578 - -
Pvu11g2036 1211 Gene3D - 148 322 IPR027417 -
Pvu11g2036 1211 Coils Coil 42 62 - -
Pvu11g2036 1211 SUPERFAMILY L domain-like 883 1145 - -
Pvu11g2036 1211 Pfam NB-ARC domain 171 389 IPR002182 GO:0043531
Pvu11g2036 1211 Pfam Rx N-terminal domain 13 104 IPR041118 -
Pvu11g2036 1211 PANTHER OS05G0414200 PROTEIN 32 967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2036 Pvu-Chr11 47210663 47215363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2036 186 778 WRKY Transcription Factor Family AT5G45050 23.672 2.27e-11 66.6