Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2033 ATGCCAGTCCTTGAAACACTTGGTGGTGCTCTTTTTGGTGCTGTTCTCCAGCTCCTGTTTGACAAGCTCGATTCTCATCAACTTCTCCACTACTTTCGTGGGAGAAAGCTGGATGTTAGACTGCTGAAAAAGTTGAAGAGGAAGCTGATGGACATCAATGCTGTGATTGATGATGCAGAACAAAAGCAGTTCACTAATTCATTGGTCAAACAATGGCTTGACGAGGTCAGAGACGCTTTGTATGATGCGGAGGATCTGTTGGAGCAAATCGACTATGCATTCTCCCAAACTCAGTTGAAAGCAGAATTCCAGAGCAGTGCTATCAAGGTAAGCAGTTTTGAATCCAAGATGATAGAACTCCTAGATGATCTAGAATCTCTCTTAGACCAAAAGCTTGTTCAAGATTTCCAAATTTCTAGTGGTGTTGGATCTGGGTTGGTTAACAACGTGTCAGGGAAAAGAAATGAATCCTCATCATTGGTGGCTGAAGAGGTTATTTATGGCAGAGATGAGGACAAACAAATGATCCTTAATTGGCTGACATCGGACAATGAGAGTTGTAGCCAATTGTCAATACTTTCTATTGTGGGTATGGGCGGGATGGGTAAGACCACACTTGCTCAACATTTATACAACAATCCAATGATAGAAGCTAAATTTGCTATCAAAGCCTGGGTCTGCGTTTCTGATGAGTTCGATGTTTTCAATCTAACCAGAGCAACTCTTGAGGCAATCCATAAGTCAACTGATGATAGCAGAAACCTAGAAATGGTTCAGGGACGATTGAAAGAAAAACTGACAGGAAGGAAGTTTCTCCTGGTTCTAGATGATGTCTGGAATGAAGATCGAGACCAATGGAAATCATTGGAAACTCCTCTTAGATATGGGGATAAGGGAAGTAAAATTCTTGTGACAACACGCAGTAATAAAGTTGCTTCTACCTTGGAGTCAAACAATATACACCAACTAAAGCAATTACAAGAAGATTATAGTTGGCAAGTTTTTGCTAAACATGCAGTGCAAAATGATAGCTCTAAGTTGAATTCTGAGTTGAAGGAGATTGGAATGAAGATAGTTGAAAAGTGTCAAGGACTGCCTCTGGCCCTTGAAACAGTAGGATCTCTTTTGCAGTCAAAGTCATCTGTTGCAGAGTGGGAAGGTGTACTGAGAAGCAACATATGGGACTTACCGATAGAAAATAGTAAAATCATCCCTGCTTTGTTGTTGAGTTATTACCATCTGCCTTCTCATCTTAAGAGATGTTTTGCTTATTGTGCGTTATTCCCCAAAGATCATAAGTTTGACAAGAAGAAGTTAATTCTCTCATGGATGGCTGAAAATTTTCTACAATTTTCTCAGCAAAGTAAGTCTCCCGAAGAAGTAGGTGAACAATACTTCAATGATCTATTTTCAAGGTCATTCTTTCAGCAATCAATTAGATCCAAAAAAACATTTTTTGTGATGCACGACCTTATGAATGATTTAGCAAAATATGTTTCTGGTGAAATCTGTTATAGGTTGGGTGTTGATAGACCAGGAAGCGTACCAACGACTACCCGTCACTTTTCCACGGTAAAGAATCCTGTTAAATGTGATGAGTACAAGAGTTTATGTGATGCTAAAAGGCTACGGACTTTTCTGTCCATATCTAAGAATTGTGGGATGTCAATACAAGAGTTGATCTCCAACTTTAAGTGCTTACGACTCTTATCTTTGGCTAAGTGTCATAACATAAAAGTGGTGCCTGACACTATAGCTGATCTTATACATCTTCGTTCATTAGACCTTTCATTCACAGACATAAAGAGACTTCCTGACTCAATTTGTTCACTCTATAACTTGCAAGTGTTGAAGCTCAACAAGTGTTTCTTTTTGAAGGAGTTGCCCTCGACTTTGCATGAACTTCAAAATTTGCGTCGCCTTGAACTTATGATGACTACTTTAAGAAAGGCTCCAGTGCTTTTAGGAAAGTTGAAGAATCTTCACGTATGGTGGGGAGGGTTTGAGGTTGGCAAAAGTAGTAGTGAGTTCAGTATCCAACAACTAGGAGAACTTGATCTTCATGGAGACCTGTCAATTAGAAATTTTGGAAATATTGTGGATCCCTCTGATGCATTAGCAGCAGATTTGAAGAATAAAACACATCTTGTTGTGCTAAGTTTAGAATGGGATTTGAAAGTGAACAATGAGGATTCAATAAAAGAAAGAGAAGTACTTGAGAATTTGCAACCTTCTAAACATTTGGAGCAGTTGTCAATCAACGGCTATTGTGGCTCACAATTTCCAGGTTGGTTATCTGAAAAATTTCTATTGAATATCATGTCCTTAATATTGTATAACTGTAAATATTGCCAATGGTTGCCTTCCCTTGGTCTTTTGACATTTCTCAAGTTCTTGGAAATTGGTGGCCTTCATCAGATAGTGAGGATAGATACCGATTTTTACGGGAATAGCTTTTCTGCATTTGCATCCTTGGAAACGTTGAAGTTTGATGATATGAAGGAATGGGAAGAATGGAAATGCATTACGGGTGCTTTTCCAAGACTTAAAGATCTTTCTGTGGCGAGATGTCCTAAACTAAAAGGACACTTGCCAGAGCACCTTCCTCATTTAAAAGAACTACATATTTGGAGGTGCGAACAACTTGTGGCTTCGACTCCCAGGGCAGTAGAAATTGAAGGTGTGAAGAAGGACACATATTCATTTAATACATCAGGGCTCCTCGTATCTGATACTTCTCTTAAATCCTTGCATATTGATTCTTGTCCAGGCATGAATATTCTCATAAACCATTGCTACTATTTCCTTGAACATTTGTATATCAGTCAATGTTGTCACTCTCTCACCAACTTCCCTCTAGACTTATTCCCAAAACTCTATGACCTCTTTTTAGAAGAATGTCATAACCTACAAATGATATCACAGAGGCACCCTCATGGTCATTTGAAGAGTCTAATAATTAAAAAATGCTCTGAATTTGAATCATTTCCCCATGAAGGATTATTTGCACCTGAGCTAAAGAGATTCTGCATTGAAGAATTGGAGAAATTGAAATCAATGCCAAAATGCATGTCTGCCCTCCTTCCATCTCTTACTCAAATGGTGATAGATACTTGTCGAGTAGTGGAGTTGTCTGACGGATGTCTACCATTAAATCTAAAACACATCTCTCTCTTCAATTGCTCAAAACTTGTTGCCACACTAAAGAATGGGGTTTGGGGAACCAACCCTTCCATAGAATCATTTTCTATTAAAGGAGTGGATGTGGAGTGTTTTCCGGGTGAAGGTTTGCTCCCACTCTCCCTTACTCAGCTATACATACATCATTTTCCAAATCTTAAGAAATTGGACTACAAAGGTCTCTGTCACCTCTCCTCTCTTCAGTTAATGTATATTCAATATTGTCCTGTACTCCAATGCTTGCCAAAGGAGGGTCTACCCGAATCCATTTCAAACCTCCGCATTAATGGCTGCCCTTTGCTTCATCAGCGATGCAAGAAACAAGAAGGCGAAGACTGGCAAAAGATTGCTCACATTAAATATCTATCTATGGGGTGA 3558 0.3918 MPVLETLGGALFGAVLQLLFDKLDSHQLLHYFRGRKLDVRLLKKLKRKLMDINAVIDDAEQKQFTNSLVKQWLDEVRDALYDAEDLLEQIDYAFSQTQLKAEFQSSAIKVSSFESKMIELLDDLESLLDQKLVQDFQISSGVGSGLVNNVSGKRNESSSLVAEEVIYGRDEDKQMILNWLTSDNESCSQLSILSIVGMGGMGKTTLAQHLYNNPMIEAKFAIKAWVCVSDEFDVFNLTRATLEAIHKSTDDSRNLEMVQGRLKEKLTGRKFLLVLDDVWNEDRDQWKSLETPLRYGDKGSKILVTTRSNKVASTLESNNIHQLKQLQEDYSWQVFAKHAVQNDSSKLNSELKEIGMKIVEKCQGLPLALETVGSLLQSKSSVAEWEGVLRSNIWDLPIENSKIIPALLLSYYHLPSHLKRCFAYCALFPKDHKFDKKKLILSWMAENFLQFSQQSKSPEEVGEQYFNDLFSRSFFQQSIRSKKTFFVMHDLMNDLAKYVSGEICYRLGVDRPGSVPTTTRHFSTVKNPVKCDEYKSLCDAKRLRTFLSISKNCGMSIQELISNFKCLRLLSLAKCHNIKVVPDTIADLIHLRSLDLSFTDIKRLPDSICSLYNLQVLKLNKCFFLKELPSTLHELQNLRRLELMMTTLRKAPVLLGKLKNLHVWWGGFEVGKSSSEFSIQQLGELDLHGDLSIRNFGNIVDPSDALAADLKNKTHLVVLSLEWDLKVNNEDSIKEREVLENLQPSKHLEQLSINGYCGSQFPGWLSEKFLLNIMSLILYNCKYCQWLPSLGLLTFLKFLEIGGLHQIVRIDTDFYGNSFSAFASLETLKFDDMKEWEEWKCITGAFPRLKDLSVARCPKLKGHLPEHLPHLKELHIWRCEQLVASTPRAVEIEGVKKDTYSFNTSGLLVSDTSLKSLHIDSCPGMNILINHCYYFLEHLYISQCCHSLTNFPLDLFPKLYDLFLEECHNLQMISQRHPHGHLKSLIIKKCSEFESFPHEGLFAPELKRFCIEELEKLKSMPKCMSALLPSLTQMVIDTCRVVELSDGCLPLNLKHISLFNCSKLVATLKNGVWGTNPSIESFSIKGVDVECFPGEGLLPLSLTQLYIHHFPNLKKLDYKGLCHLSSLQLMYIQYCPVLQCLPKEGLPESISNLRINGCPLLHQRCKKQEGEDWQKIAHIKYLSMG* 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2033 1185 Gene3D - 410 498 IPR036388 -
Pvu11g2033 1185 Coils Coil 110 130 - -
Pvu11g2033 1185 Gene3D Ribonuclease Inhibitor 514 898 IPR032675 -
Pvu11g2033 1185 SUPERFAMILY L domain-like 912 1177 - -
Pvu11g2033 1185 PRINTS Disease resistance protein signature 192 207 - -
Pvu11g2033 1185 PRINTS Disease resistance protein signature 265 279 - -
Pvu11g2033 1185 PRINTS Disease resistance protein signature 362 376 - -
Pvu11g2033 1185 PRINTS Disease resistance protein signature 562 578 - -
Pvu11g2033 1185 PANTHER OS05G0414200 PROTEIN 32 1001 - -
Pvu11g2033 1185 Pfam NB-ARC domain 171 389 IPR002182 GO:0043531
Pvu11g2033 1185 Gene3D - 19 128 - -
Pvu11g2033 1185 Gene3D Ribonuclease Inhibitor 901 1183 IPR032675 -
Pvu11g2033 1185 SUPERFAMILY L domain-like 487 887 - -
Pvu11g2033 1185 Pfam Rx N-terminal domain 13 101 IPR041118 -
Pvu11g2033 1185 Coils Coil 42 62 - -
Pvu11g2033 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 425 IPR027417 -
Pvu11g2033 1185 Gene3D - 149 322 IPR027417 -
Pvu11g2033 1185 Gene3D - 325 409 IPR042197 -
Pvu11g2033 1185 PANTHER DISEASE RESISTANCE PROTEIN RP 32 1001 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2033 Pvu-Chr11 47151862 47155575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2033 563 663 Receptor kinase-like Gene Family AT4G13920 36.538 2.38e-08 56.6