Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2028 ATGCCAGTCCTTGAAACACTTGGTGGTGCTCTTTTTGGTGCTGTTCTCCAGCTCCTGTTTGACAAGCTCGATTCTCATCAACTTCTCCACTACTTCCGTGGGAGAAAGCTCGATGTGAAGCTGCTGAAAAAGTTGAAGAGGAAGCTGATGGACATCAATGCTGTCATTGATGATGCAGAACAAAAGCAGTTCACTAATTCATTGGTCAAACAATGGCTTCATGAGGTTAGAGAGGCTTTGTATGATGCAGAGGATCTGATGGAGCAAATAGACTATGAATTCTCCAAAAGTGAGTTGAAAGCTGAATTCCAGAGCAGTGCTAGCAAGGTAAGCAGTTTTGAATCCAAGATCATAGAACTCCTAGATGATCTAGAATCTCTCTTAGACCAAAAGCTTGTTCAAGATTTCAAAATTTCTAGTGGTGTTCGATCTGGGTTGGCTAATAACGTGTCAAGGAAAACATATGAATCCTCATCATTAGTGGCTGAAGAGGTTATTTATGGCAGAGATGAGTACAAAGAAATCATCCTTAATTGGTTGACATCTGACAATGGAAATCATAATCAGCTTTCAATACACTCTATTGTGGGTATGGGCGGGATGGGTAAGACCACACTTGCTCAACATGTATACAACCACCCAATGATAAAGGCTAAATTTGCTATCAAAGCCTGGGTCTGCGTTTATGATGAATTTGATGCAATCCATAAGTCAAGTGATGATAGCAGAAACTTAGAAATGGTTCAAGGAAGATTGAAAGAATCATTGACAGGACGGAAGTTTCTTTTAGTTTTGGATGATGTCTGGAACGAAGACCGAGACCAATGGAAATCATTGCAAACTCCTCTTAAATATGCGGCTAAGGGGAGTAAAATTCTTGTGACAACACGCAGTAACAAAGTTGCTTCTACCTTGGAGTCAAACAATATACACCAACTAAAGCAATTACAAGAAGATCACAGTTGGCAAGTTTTTGCTAAACATGCAGTCCAAGATGATAGCTCTAAGTTGAATTCTGAGTTAAAGGATATTGGCATGAAGATACTTGAAAAGTGCCAAGGACTGCCTCTGGCCCTTGAAACGATAGGATCTCTTTTACAGTCAAAGTCATCTGTTGTAGAGTGGGAAGGTGTACTAAGAAGCAACATATGGCAGTTACCGATAGAAAATAGTAAAATCATCCCCGCTTTGTTGTTGAGTTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTTACTTATTGTGCGTTATTCCCTAAAGACCATGAGTTTGACAAGGAGAATTTAATTCTCTCATGGATGGCTGAAAATTTTCTACAATGCTCTCAACATAGTAAGTCTCCAGAAGAAGTAGGTGAACAGTACTTCAATGATTTATTATCAAGGTCATTCTTTCAACAATCAGTTACACAAGACATGATAAACAACAAAACATTTTTTGTGATGCACGACCTTCTGAATGATTTAGCAAAATATGTTTCTGGTGAAATGTGCTACAGGTTGGGTGTTGATATACCAGGAAGCGTACCAACGACTACCCGTCACTTTTCAGCGATAAAGAATCATGTTGAATGTGATGAGTATAGGGGTTTATGTGATGCTAAAAGGCTACGAACATTTATGTCCATATCTAGGACTTTTGGGATGTCAATACAAGACTTGATCTCCAACTTTAAGTGCTTACGACTCTTATCATTGTTTGATTGTCGTAACATAAAAGAGGTGCCTGACACTATATCTGATCTTATACATCTCCGTTCATTAGAACTTTCACATTGCCACATAAAGAGACTTCCGGACTCAATATGTTCACTCTATAACTTGCAAGTGTTGAAGCTCAACATTTGTATCTTTTTGAAGGAGCTGCCCTTGACTTTGCATGAACTTCCAAATTTGCGTCGCCTTGAACTTATAGGAACTTATTTAAGAAAGGCTCCAGTGCTTTTAGGAAAGTTGAAGAATCTTCAAGTATGGATGGGTGGATTTGAGGTTGGCAAAAGTAGTAGTGAGTTCAGTATTCAACAATTAGGAAAACTTGATCTTCATGGAAAGCTTTCAATTACAAATCTTGAAAATATTGTGGATCCCTGGGAGGCATTTGTAGCGGATTTGAAGAATAAAACACATCTTGTGGCGCTACGTTTAAAATGGAATTTGAAAGTAAACAGTGAGGATTCAATAAAAGAAAGGGAAGTACTTGAGAATTTGCAACCTTCTAGACATTTGGAGCAGTTGTCAATCATCGGCTATTGTGGCACACAATTTCCAGGTTGGTTATCAGAAAAATTTCTATTGAATATTGTGTTCTTAAAATTGTATAACTGTAAATATTGCCAATGGTTGCCTTCCCTTGGACTTTTCACATTTCTCAAGCACTTGGAAATTTACGGCCTTGATAAGATAGTGAGGATAGATGTTGATTTTTACGGGAATAGCTTTTCTGCATTTGCATCCTTAGAAACATTGAGTTTTAATGATATGAAGGAATGGGAAGAATGGCAATGCATTACGGGTGCTTTTCCAAGTCTTAAACAACTTTCTGTGGCGGGTTGTCCTAAACTGAAAGGGCACTTGCCAGAGCACCTTCCTCGTTTAAAAGAACTATCTATTTATAGGTGCGAACAACTTGTGGCTTCAACTCCCGCGATAGAAATTGAAGGGTTCCTCGTATCTGATACTCTTCTTGAATCCTTGTATATTTCTTCTTGTTCGGGCATGAATATTCCCATAAATCATTGTTATGATTTCCTTTTGAAATTGGTTATCAATCAATGTTGCCACGCTCTCATGAACTTCCCTCTAGACTTATTCCCAAAACTCTGTGTCCTTTCTTTAAACAAATGTCATAACCTACAGATGATATCACAGGGGCACCGTCATGATCATTTGAATATGCTGACAATTAAAAAATGTTGTCAATTTGAATCATTTCCCATTGAAGGATTATTTGCACCTCAGTTAGAGACATTGTATATTGAAGAAATGGAGAAATTGAAATCAATGCCTAAACGCATGTCTGCCCTCCTTTCATCTCTTAATTATCTAGAGATAAATAATTGTCCAAGAGTAGAGTTGTCTGAAGGATGTTTGCCATTAAATCTAAAATACATCTCTCTCTTGAATTGCTTCAAACTTGTTGCCTCACTAAATAAGGGGGTTTGGGGAACCAACCCTTCCCTAGAATCCCTGTTTATTGGAAAAGTTGACGTGGAGTGTTTTCCGGATGAAGGTTTGCTCCCACTCTCTCTTACTGAGCTACGCATAAATGATTGTCCAAATCTTAAGAAACTGGACTACAAGGGTCTCTGTCACCTCTCCTCTCTTCAAACAATGTTTATTCGAAATTGTCCTCTACTCCAATGCTTTCCAGAGGAGGGTCTGCCGGAATCAATTTCAGAACTCCACATTGAAGATTGCCCTTTGCTTCATCAGCGATGCAAGAAACAAGAAGGCGAAGACTAG 3462 0.3853 MPVLETLGGALFGAVLQLLFDKLDSHQLLHYFRGRKLDVKLLKKLKRKLMDINAVIDDAEQKQFTNSLVKQWLHEVREALYDAEDLMEQIDYEFSKSELKAEFQSSASKVSSFESKIIELLDDLESLLDQKLVQDFKISSGVRSGLANNVSRKTYESSSLVAEEVIYGRDEYKEIILNWLTSDNGNHNQLSIHSIVGMGGMGKTTLAQHVYNHPMIKAKFAIKAWVCVYDEFDAIHKSSDDSRNLEMVQGRLKESLTGRKFLLVLDDVWNEDRDQWKSLQTPLKYAAKGSKILVTTRSNKVASTLESNNIHQLKQLQEDHSWQVFAKHAVQDDSSKLNSELKDIGMKILEKCQGLPLALETIGSLLQSKSSVVEWEGVLRSNIWQLPIENSKIIPALLLSYYHLPSHLKRCFTYCALFPKDHEFDKENLILSWMAENFLQCSQHSKSPEEVGEQYFNDLLSRSFFQQSVTQDMINNKTFFVMHDLLNDLAKYVSGEMCYRLGVDIPGSVPTTTRHFSAIKNHVECDEYRGLCDAKRLRTFMSISRTFGMSIQDLISNFKCLRLLSLFDCRNIKEVPDTISDLIHLRSLELSHCHIKRLPDSICSLYNLQVLKLNICIFLKELPLTLHELPNLRRLELIGTYLRKAPVLLGKLKNLQVWMGGFEVGKSSSEFSIQQLGKLDLHGKLSITNLENIVDPWEAFVADLKNKTHLVALRLKWNLKVNSEDSIKEREVLENLQPSRHLEQLSIIGYCGTQFPGWLSEKFLLNIVFLKLYNCKYCQWLPSLGLFTFLKHLEIYGLDKIVRIDVDFYGNSFSAFASLETLSFNDMKEWEEWQCITGAFPSLKQLSVAGCPKLKGHLPEHLPRLKELSIYRCEQLVASTPAIEIEGFLVSDTLLESLYISSCSGMNIPINHCYDFLLKLVINQCCHALMNFPLDLFPKLCVLSLNKCHNLQMISQGHRHDHLNMLTIKKCCQFESFPIEGLFAPQLETLYIEEMEKLKSMPKRMSALLSSLNYLEINNCPRVELSEGCLPLNLKYISLLNCFKLVASLNKGVWGTNPSLESLFIGKVDVECFPDEGLLPLSLTELRINDCPNLKKLDYKGLCHLSSLQTMFIRNCPLLQCFPEEGLPESISELHIEDCPLLHQRCKKQEGED* 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2028 1153 Pfam Rx N-terminal domain 13 104 IPR041118 -
Pvu11g2028 1153 SUPERFAMILY L domain-like 481 876 - -
Pvu11g2028 1153 ProSiteProfiles Leucine-rich repeat profile. 584 605 IPR001611 GO:0005515
Pvu11g2028 1153 Coils Coil 110 130 - -
Pvu11g2028 1153 Pfam NB-ARC domain 172 380 IPR002182 GO:0043531
Pvu11g2028 1153 Gene3D - 400 492 IPR036388 -
Pvu11g2028 1153 SUPERFAMILY L domain-like 893 1146 - -
Pvu11g2028 1153 Gene3D - 17 129 - -
Pvu11g2028 1153 Gene3D - 144 315 IPR027417 -
Pvu11g2028 1153 Gene3D - 316 399 IPR042197 -
Pvu11g2028 1153 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 415 IPR027417 -
Pvu11g2028 1153 Gene3D Ribonuclease Inhibitor 525 913 IPR032675 -
Pvu11g2028 1153 PRINTS Disease resistance protein signature 192 207 - -
Pvu11g2028 1153 PRINTS Disease resistance protein signature 255 269 - -
Pvu11g2028 1153 PRINTS Disease resistance protein signature 352 366 - -
Pvu11g2028 1153 PRINTS Disease resistance protein signature 860 876 - -
Pvu11g2028 1153 PANTHER DISEASE RESISTANCE PROTEIN RP 32 977 IPR044974 GO:0006952
Pvu11g2028 1153 Coils Coil 42 62 - -
Pvu11g2028 1153 Gene3D Ribonuclease Inhibitor 920 1148 IPR032675 -
Pvu11g2028 1153 PANTHER OS05G0414200 PROTEIN 32 977 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2028 Pvu-Chr11 47105588 47111498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2028 520 657 Receptor kinase-like Gene Family AT4G13920 30.000 3.92e-08 55.8