Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2023 ATGAATCCCAAGATATCAGATTTTGGATTGGCAAGGGCATTTGAAGGAGGACAGAACCAAGCAAATACAAAACGAGTAATGGGAACTTATGGATACATGGCTCCAGAATACGCTATGGAAGGACTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGGAGAAAGAATGGTGGATTCTACATGTCAGATGGTCAAACTCTCCTTGTATACGCTTGGAGAATATGGTATGAAGGAAAATGTTTGGAATTGATGGATCCAGTGCTGGAAAAATCCTTCATAGGAGATGAAGTAGAGAGGTGCATACAGATTGGTTTGTTGTGTGTTCAAGAAGATGCAAGAGATAGACCAACCATGTCTGATGTTGTTGTAATGCTGGCGAGTGACACAGTGGCCATTCCAAAACCCAAGCACCCAGCATTTTCAATTGGAAGAACCTCAGAGGAAGTCTCTACATCAAGAAGTTCCAAGAATCTTTCCATTAATAATATAACATCCTCTATTACTTTACCGAGGTAA 543 0.3978 MNPKISDFGLARAFEGGQNQANTKRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGRKNGGFYMSDGQTLLVYAWRIWYEGKCLELMDPVLEKSFIGDEVERCIQIGLLCVQEDARDRPTMSDVVVMLASDTVAIPKPKHPAFSIGRTSEEVSTSRSSKNLSINNITSSITLPR* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2023 180 Pfam Protein tyrosine and serine/threonine kinase 4 133 IPR001245 GO:0004672|GO:0006468
Pvu11g2023 180 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g2023 180 Gene3D Transferase(Phosphotransferase) domain 1 1 143 - -
Pvu11g2023 180 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 1 175 - -
Pvu11g2023 180 SUPERFAMILY Protein kinase-like (PK-like) 2 165 IPR011009 -
Pvu11g2023 180 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 175 - -
Pvu11g2023 180 Pfam Domain of unknown function (DUF3403) 136 180 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2023 Pvu-Chr11 47061355 47062308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2023 1 180 Receptor kinase-like Gene Family AT4G23150 52.406 2.40e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g2023 PK_Tyr_Ser-Thr 4e-15 CL0016