Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2019 ATGCCACTCCTTGAAACTCTTGGTGGTGCTCTTTTCGGTGCTGTTCTCCAGCTCCTATTGGACAAGCTCGATTCTCAACAAATCCTGGACTACTTTGGTGGGACAAAGCTCGATGGGAGGCTGCTGAAAAAGTTGAAGAGGAAGTTGATGGACATCAATGCTGTGATTGATGATGCAGAACAAAAACAGTTCACTAATTCATTGGTCAAACAATGGCTTCATGAGGTCAGAGACGCTTTGTATGACGCGGAGGATCTGTTGGACCAAATAGACTATGAATTCTCCAAAACTCAGTTGAAAGCTGAATTCCAGAGCAGTGCTAGCAAGGTAAGCAGTTTTCAATCCAAGATCATAGAACTCCTAGATGATCTACAATCTCTCTTAGACCAAAAGCTTGTTCAAGATTTCAAAATTTCTAGTGGTGTTGGATCTGGCTTGGGTAATAAAGTGTCACAGAAAAGAAATGAATCCTCATCGTTGGTGGCCCAAGAGGTTATTCATGGCAGAGATGAGGACAAAAAAAACATCCTTGATTGGTTGATATCTGACAATAACAATCATAACCAACTATCAATACTTTCTATTGTGGGTATGGGTGGGATGGCAATTCTTGAGTCAATCCTTAAGGAAACTGATAATAGCAGAAACCTAGAAATGGTTCAGGGGAGATTTAAAGAAAAGTTGAAAGGAATGAAGTTTCTTCTGGTTTTGGATGATGTTTGGAACGAACACCGAGACCAATGGAAATCATTACAAACTGCTCTTAAATATGGTGCTAAGGGAAGTAAAATTCTTATCACAACACGCATTAACAAAGTTGCTTCTATCATGGAGTCAAGCAATACTCACCAACTAAAGCAATTACAAAAAGATCACAGTTGGCAAGTTTTTGCTAAATATGCATTTCAAGATGATAACTCTAAGTCGAATTCTGTGTTGGAGGAGATTGGCATAAAGATAGTTGAAAAGTGCCAAGGACTGCCTCTGGCCCTTGAAACGGTAGGAGGTCTTTTACAGTCAAAGTCATATGTTTCAGAGTGGAAAGGTGTACTAAGAAGCGGCATATGGGACCTACCAATAGAAGATAGTAAAATCATTCCCGCTTTGTTATTGAGCTATTACCATCTTCCTTCTCATCTTAAGAGATGTTTCGCTTATTGTGCATTATTCCCCAAAGGCCATAAGTTTGACAAGGAGAGCTTAATTCTATCATGGATGGCTGAAAATTTTCTACAATGCTCTCATCAGACAAAATATGTTTCTGGTGAAATGTGCTATAGGTTGGGTGTTGATAGACCAGGAAGCATACCTAAGACTACCCGTCACTTTTCAACAGTAAAGAATCCTGTTAAATGTGATGAGTATAAGAGTTTATGTGATGCTAAAAGGCTACGGACATTTCGGTCCATATATAGGAATTGTGGGATGTCAATACAAGAGTTGATCTCCAACTTTAAATTCTTACGACTCTTATCTTTGCCTGACTGTCGTAACATAAAAGAGGTGCCTGACACTATAGTGAATCTTATACATCTCCGTTCATTAGACCTTTCATTCACAGACATAGAAAGACTTCCTGACTCAATATGTTCACTTTATAACTTGCAAGTGTTGAAGCTGAACTGTTGTTATCTTTTGAAGGAGTTGCCCTCGACTTTGCATGAGCTCACTAAGTTGCGTCGCCTTGAACTTATTGAAACTTCATTAAGAAAGGCTCCAGTTCTTTTTGGAACGTTGAAGAATCTTCAAGTATGGATGGGTAAGTTTGAGGTTAGCAAAAGTAGTAATATTCAACAATTAGGAGAACTTGATGTTCACGGAGAGTTGTCAATTAAAAATCTTGAAAATATGGTGAATCCCTGTGATGCATTGGTAGTGGCTTTGAAGAAGAAAACAAATCTTCGGAACACTAACGAATCAATAAAGGAAAGAGAAATACTAGAGAATCTGCAACCTTGTAGACATTTGGAGAAGTTGTCAATCTATGGCTATGGCGGAACACAATTTCCCCGTTGGTTATCTGATAATTCTCTATTGAATGTTGTGTCCTTAACTTTGAATAACTGTAAACATTGCTTGCAGTTGCCTTCCCTTGGACTTTTAACATCTCTCAAGTACTTGAAAATTTTCTGCCTTCTTCAAATAGTGAGAATAGATGCTAATTTTTACGGGAATAGTTCATCTGCATTTGCATCCTTGGAAACATTGATCTTTCATGATATGCCGGAATGGGACGAATGGGAATGCAAGACAAGTGCTTTTCCAAGTCTTCGATATCTTTCTGTGTCGAATTGTCCCAAACTGAAAGGACACTTGTCAGAACACCTTTCTCATTTAAAGTATCAAACTATTGATGTTTGCAAACAACTTAAAATTGAAGGTGTGAAGATGGAGACATCTCCATTTGATATGATAGGGCACCATCTTCATTCCTTGAGGATTTTTTTTTGTTCGGACATGAATATTCCCATAAATCATTGCTACGGTTTCCTTGTAGAATTGCATATTACTCAAAGTTGTGACTCTCTCGCGAACTTCCCTCTAGACTTATTCCCAAAACTCCGTGAGCTTGATTTAGTCGACTGTCGTAACCTACAGATAATATCACAGGGGCACCCTCATCGTCATTTGAAGAGTATGAGAATTGAAAAATGTTCTGAATTTGAATTATTTCCCGATGAAGGATTATTTGCACCTCAGCTAGAGAAATTTTCGATTGAAGGATTGGAGAAATTGAAATTAATGCCGAAACGCATGTCTGCCCTCCTTCCATCTCTTAACTATCTAAATATAAATAATTGTCCAGGAGTGGAGTTGTCTGACGAATGTCTGCCATTTAATTTAAAACACATCTATCTCTTGAATTGCTCCAAACTTGTTGCCTCATTAAAGAAGGAGGTTTGGGGAAAAAACCCTTACCTAGAATTCTTGTCTGTTGAAAAAGATGACATGGAGTATTTTCCAGATGAAGGTTTGCTCCCACAGTCTCTTACTGAGCTACGCATAAAAGATTGTTTAAATCTTAAGAAACTGGACTATAGGGGTCTCTGTCACCTCTCCTCTCTTCAGAAATTGTTTCTCAGTAAGTGTCCAATACTCCAATGCTTGCCAGAGGAGGGTCTACCCGAATCCATTTCACAACTCATAATTACAGATTGTCCGTTGCTCAAACAGCGGTACAAGAAATAA 3189 0.3851 MPLLETLGGALFGAVLQLLLDKLDSQQILDYFGGTKLDGRLLKKLKRKLMDINAVIDDAEQKQFTNSLVKQWLHEVRDALYDAEDLLDQIDYEFSKTQLKAEFQSSASKVSSFQSKIIELLDDLQSLLDQKLVQDFKISSGVGSGLGNKVSQKRNESSSLVAQEVIHGRDEDKKNILDWLISDNNNHNQLSILSIVGMGGMAILESILKETDNSRNLEMVQGRFKEKLKGMKFLLVLDDVWNEHRDQWKSLQTALKYGAKGSKILITTRINKVASIMESSNTHQLKQLQKDHSWQVFAKYAFQDDNSKSNSVLEEIGIKIVEKCQGLPLALETVGGLLQSKSYVSEWKGVLRSGIWDLPIEDSKIIPALLLSYYHLPSHLKRCFAYCALFPKGHKFDKESLILSWMAENFLQCSHQTKYVSGEMCYRLGVDRPGSIPKTTRHFSTVKNPVKCDEYKSLCDAKRLRTFRSIYRNCGMSIQELISNFKFLRLLSLPDCRNIKEVPDTIVNLIHLRSLDLSFTDIERLPDSICSLYNLQVLKLNCCYLLKELPSTLHELTKLRRLELIETSLRKAPVLFGTLKNLQVWMGKFEVSKSSNIQQLGELDVHGELSIKNLENMVNPCDALVVALKKKTNLRNTNESIKEREILENLQPCRHLEKLSIYGYGGTQFPRWLSDNSLLNVVSLTLNNCKHCLQLPSLGLLTSLKYLKIFCLLQIVRIDANFYGNSSSAFASLETLIFHDMPEWDEWECKTSAFPSLRYLSVSNCPKLKGHLSEHLSHLKYQTIDVCKQLKIEGVKMETSPFDMIGHHLHSLRIFFCSDMNIPINHCYGFLVELHITQSCDSLANFPLDLFPKLRELDLVDCRNLQIISQGHPHRHLKSMRIEKCSEFELFPDEGLFAPQLEKFSIEGLEKLKLMPKRMSALLPSLNYLNINNCPGVELSDECLPFNLKHIYLLNCSKLVASLKKEVWGKNPYLEFLSVEKDDMEYFPDEGLLPQSLTELRIKDCLNLKKLDYRGLCHLSSLQKLFLSKCPILQCLPEEGLPESISQLIITDCPLLKQRYKK* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2019 1062 SUPERFAMILY L domain-like 799 1057 - -
Pvu11g2019 1062 Pfam NB-ARC domain 209 351 IPR002182 GO:0043531
Pvu11g2019 1062 Gene3D - 16 129 - -
Pvu11g2019 1062 SUPERFAMILY L domain-like 438 780 - -
Pvu11g2019 1062 Gene3D Ribonuclease Inhibitor 434 585 IPR032675 -
Pvu11g2019 1062 PRINTS Disease resistance protein signature 111 125 - -
Pvu11g2019 1062 PRINTS Disease resistance protein signature 324 338 - -
Pvu11g2019 1062 PRINTS Disease resistance protein signature 849 865 - -
Pvu11g2019 1062 Gene3D Ribonuclease Inhibitor 590 796 IPR032675 -
Pvu11g2019 1062 Pfam Rx N-terminal domain 13 105 IPR041118 -
Pvu11g2019 1062 Gene3D - 287 371 IPR042197 -
Pvu11g2019 1062 PANTHER OS05G0414200 PROTEIN 35 890 - -
Pvu11g2019 1062 Gene3D - 372 428 IPR036388 -
Pvu11g2019 1062 Coils Coil 42 62 - -
Pvu11g2019 1062 Gene3D Ribonuclease Inhibitor 797 1062 IPR032675 -
Pvu11g2019 1062 Gene3D - 201 285 IPR027417 -
Pvu11g2019 1062 PANTHER DISEASE RESISTANCE PROTEIN RP 35 890 IPR044974 GO:0006952
Pvu11g2019 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 387 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2019 Pvu-Chr11 47041343 47044809 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2019 456 667 Receptor kinase-like Gene Family AT4G13920 28.139 2.49e-10 62.8