Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2017 ATGGGTGGGATGGGTAAGACCACACTTGCTCAACATGTATACAACCACTCAATAATAGAGGATAAATTTGCTATTAAAGCCTGGGTTTGTGTTTCTGAAGAATTTGATATTTTCATGTTAACCAGAGCAATTCTTGAGTCATTCCGTAAGGAAACTGATAATAGCAGAAACCTAGATATGGTTCAGGGACGATTGAAAGAAAAATTGAATGGAATGAAGTTTTTTCTAGTTCTGGATGATGTTTGGAACGAACACCGAGATCAATGGAAATCATTGCAAACTCCTCTTAAATATGGTGCTAAGGGAAGTAAAATTCTTATCACAACACGCATTAACAAAGTTGCTTCTATCATGCAGTCAAACAGTATTCACCAACTAAAGCAATTACAAAAAGATCACAGTTGGCAACTTTTTGCTAAATATGCATTTCAAGATGATAACTTTAAGTCAAATTTTGTGTTGGAGGAGATTGGCATGAAGATAGTTGAAAAGTGCCAAGGACTGCCTCTGGCCCTTGAAACGGTAGGAGGTCTTTTACAATCAAAGTCATCTGTTTCAGAGTGGGAAGGTGTACTGAGAAGCAACATATGGGACTTACTAATAGAAGATAATAAAATCATCCCCGCTTTGTTATTGAGCTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTTGCTTATTGTGCGTTATTCCCCAAAGACCATATGTTTGACAAAGAGAGCTTAATTTTCTCATGGATGGCTGAAAATTTTCTACAATCCTCTCAGCAGAGTAAGTCTCTAGAAGAAGTAGGTGAGCAGTACTTCAATGATCTATTATCAAGGTCATTCTTTCAACAATCAATTAGGTACGACCAAAAACGTTTTGTGATGCACGACTTTTTGAATGATTTAGCAAAATATGTTTCTGGTAAAATGTGCTACAGGTTGGGTGTTGATACACCAGGAAGCGTACCAAAGACTACCCGCCACTTTTCAACGATAAAGAATCCTGTTGAATGTGATGAGTATATGAGTTTATGTGATGCTAAAAGGCTACGGACATTTCTGTCCATATCTTGGAATTGTGGGATGTCAATACAAGACTTGATCTCCAACTTTAAATGCTTACGACTTTTATCTTTGTCTGATTGTTGTAACATAAGAGAGGTGCCTGACACTATAGCCGATCTTATACATCTCCGTTCATTAGAACTTTCAAGGACAGACATAGAGAGACTTCCTGACTTAATATGTTCACTTTATAACTTGCAAGTGTTGAAGCTGAACCAGTGTCCCAATTTGAAGGAGTTGCCCTCGACTTTGCATGAGCTCACTAAGTTGCGCCGCCTTGAACTTATTGAAACTTATTTAAGAAAGGCTCCAATTCTTTTACGAAAGTTGAAGAATCTTCAAGTAAGGATGGATAGGTTTAAGGTTGGCAAAAGCAGTGAGTTTAGTATTAAACAACTAGGAGAACTTGATATTCAGGGGGAGCTAAAAATTAAAAATCTTGAAAATGTCATGAATTCATGTGATGCATTCGCAGTGGATTTGAAGAATAAAACACATGTTGTGGGGCTAAGTTTAGAATGGGATTCGCAACTGAACAATGAGGATTCAATAAAAGAAAGAGAAGTACTAGAGAATCTGCAACCTTCCAAACATCTGGAGAAGTTGTCAATCGATGGCTATGGTGGAACACAATTTCCAGGTTGGTTATCTGATAATTCTCTATTGAATGTGGTGTCCTTAACTTTGAAGAACTGTAAAAATTGCATGCAGTTGCCTTCCCTTGGACTTTTAACAGTTCTTAAGTACTTGGCAATTTACAGCCTTCATCAAATAGTGCTGATAGATGCTAATTTTTACGGGAATAGCTCATCTTCATTTGCATCCTTGGAAACATTGATCTTTGTTGATATGAAGGAATGGGAAGAATGGGAATGCAAGAAAAGTGCTTTTCCAAGTCTTCAACGTCTTTCTGTGTCGAATTGTCCCAAACTGAAAGGACACTTCTTAGAACACCTTTGTCATCTAAAGTGTCAAACTATTGATGTTTGCAAACAACTTGAGGCATCGACTCTAGAAATTGAAGGTGTGAAGAAGAAGACATCTCCATTTGATATGATAGGGCACCATCTTCAATCTTTGAGTATTTTTCTTTGTCCGGGCATGAATATTCCCATAAACCATTGCTATCATTTCCTTGTACAATTGTATATCAGTCAATGTTGCGGCTCTCTCACGAACTTCCCTTTGGACTTATTTCCAAAACTCTACATCCTTTCTTTAGACGAATGTCATAACCTACATATGATATTACAAAGGCACCCTCACAGTCATTTGAAGAATCTGACAATTAAAAAATGCTGTGAATTTAAATCATTTCCCAATAAAGGGTTATTTGCACATGAGCTAGAGACATTTCATATTGAAGATTTGGCGAAATTGAAATCAATGCCTGAACTCATGTCCACTCTCCTTCCATCTCTCAATCATCTGGAGATAAATAATTGTCCAAGAGTGGAGTTGTCTAAGAGATGTTTGCCATCAAATCTCAAAGAATTGAGTCTCTCGAATTGCTCCAAACTTGTTGCCTCACTAAATAAGGGGGTTTGGGGAACCAACCCTTCCCTAGAATCCTTGTCTATTGGAAAAGATGACGTGGAGTGTTTTCCAGGTGAAGGTTTGCTCCCACTCTCTCTTACTTCTCTATACATAAAAGATTGTCTAAATCTTAAGAAACTGGACTACAGGGGTCTCTGTCACCTCTCTTCTCTTCAGAAATTGGGTATTAGTAGTTGTCCAATACTTCAATGCTTGTCAGAGGAGAGTCTCCCTGAATCCATTTCAGAACTTAGCATTATAGATTGTTCGTTGCTCAAACACATTTCAGAACTTAGCATTATAGATTGTCCGTTGCTCAAACAACGGTACAATAAAGAAGAAGGTGAAGATTGGAAAAAAATTGCTCATATTCAAAATATATGGATAATGGTTAACAAGTAA 2991 0.3735 MGGMGKTTLAQHVYNHSIIEDKFAIKAWVCVSEEFDIFMLTRAILESFRKETDNSRNLDMVQGRLKEKLNGMKFFLVLDDVWNEHRDQWKSLQTPLKYGAKGSKILITTRINKVASIMQSNSIHQLKQLQKDHSWQLFAKYAFQDDNFKSNFVLEEIGMKIVEKCQGLPLALETVGGLLQSKSSVSEWEGVLRSNIWDLLIEDNKIIPALLLSYYHLPSHLKRCFAYCALFPKDHMFDKESLIFSWMAENFLQSSQQSKSLEEVGEQYFNDLLSRSFFQQSIRYDQKRFVMHDFLNDLAKYVSGKMCYRLGVDTPGSVPKTTRHFSTIKNPVECDEYMSLCDAKRLRTFLSISWNCGMSIQDLISNFKCLRLLSLSDCCNIREVPDTIADLIHLRSLELSRTDIERLPDLICSLYNLQVLKLNQCPNLKELPSTLHELTKLRRLELIETYLRKAPILLRKLKNLQVRMDRFKVGKSSEFSIKQLGELDIQGELKIKNLENVMNSCDAFAVDLKNKTHVVGLSLEWDSQLNNEDSIKEREVLENLQPSKHLEKLSIDGYGGTQFPGWLSDNSLLNVVSLTLKNCKNCMQLPSLGLLTVLKYLAIYSLHQIVLIDANFYGNSSSSFASLETLIFVDMKEWEEWECKKSAFPSLQRLSVSNCPKLKGHFLEHLCHLKCQTIDVCKQLEASTLEIEGVKKKTSPFDMIGHHLQSLSIFLCPGMNIPINHCYHFLVQLYISQCCGSLTNFPLDLFPKLYILSLDECHNLHMILQRHPHSHLKNLTIKKCCEFKSFPNKGLFAHELETFHIEDLAKLKSMPELMSTLLPSLNHLEINNCPRVELSKRCLPSNLKELSLSNCSKLVASLNKGVWGTNPSLESLSIGKDDVECFPGEGLLPLSLTSLYIKDCLNLKKLDYRGLCHLSSLQKLGISSCPILQCLSEESLPESISELSIIDCSLLKHISELSIIDCPLLKQRYNKEEGEDWKKIAHIQNIWIMVNK* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2017 996 SUPERFAMILY L domain-like 290 682 - -
Pvu11g2017 996 SUPERFAMILY L domain-like 699 973 - -
Pvu11g2017 996 Gene3D Ribonuclease Inhibitor 843 996 IPR032675 -
Pvu11g2017 996 Gene3D - 128 212 IPR042197 -
Pvu11g2017 996 Gene3D - 1 125 IPR027417 -
Pvu11g2017 996 Pfam NB-ARC domain 1 192 IPR002182 GO:0043531
Pvu11g2017 996 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 228 IPR027417 -
Pvu11g2017 996 Gene3D Ribonuclease Inhibitor 698 842 IPR032675 -
Pvu11g2017 996 Gene3D Ribonuclease Inhibitor 333 696 IPR032675 -
Pvu11g2017 996 PANTHER DISEASE RESISTANCE PROTEIN RP 1 789 IPR044974 GO:0006952
Pvu11g2017 996 PANTHER OS05G0414200 PROTEIN 1 789 - -
Pvu11g2017 996 Gene3D - 213 301 IPR036388 -
Pvu11g2017 996 PRINTS Disease resistance protein signature 68 82 - -
Pvu11g2017 996 PRINTS Disease resistance protein signature 165 179 - -
Pvu11g2017 996 PRINTS Disease resistance protein signature 412 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2017 Pvu-Chr11 47025855 47028845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2017 1 189 WRKY Transcription Factor Family AT5G45050 28.934 9.89e-11 64.3