Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2016 ATGGCTTGCCATGTTCAAATCCTTTCTATCTTAACAGATGATGAGAAAAGAAAACAACTTGATTGTAAACTAAGATTAACCATTATCAATGGAATAGCAAGAGATCTTCTATACCTTCATGAGGACTCTCGACTCAAAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGACCATGACATGAATCCCAAAATATCAGATTTTAGATTGGCAAAAAAGCATTTGAAATTGGACAGAACCAAGCAAATACAAAACGACTTCGGAGTTCTAGTTCTAGAAACCATTTGTGGAAGAAAGAACAACGGATTCTATCTGTCAGAACATGGTCAAACTCTTCTTTTATATGCTTGGAGAACATGGTGTGAAGGAAAATGTTTGGAATTGATGGATCCAATGCTGGAAAAATCCTTCAAAGGCAGTGAAGTTGAGAAGTGCATACACATTGCTTTGTTGTGCGTTCAAGAAAATGCAACATACAGACCAACCATGTCAGATGTTGTTGTTATGCTAGGGAGTGACAACATGACGCTTCCAAAACCCAAGCACCCAGCATTTTCAGTTGGAAGAAAGGTGTCAGAGGAAGTACAAATAGACTACGAATTCTCCAAAACTGAGTTGAAAGCTGAAATTCAGAGCAGTGCTAGCAAG 654 0.3777 MACHVQILSILTDDEKRKQLDCKLRLTIINGIARDLLYLHEDSRLKVIHRDLKASNVLLDHDMNPKISDFRLAKKHLKLDRTKQIQNDFGVLVLETICGRKNNGFYLSEHGQTLLLYAWRTWCEGKCLELMDPMLEKSFKGSEVEKCIHIALLCVQENATYRPTMSDVVVMLGSDNMTLPKPKHPAFSVGRKVSEEVQIDYEFSKTELKAEIQSSASK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2016 218 SUPERFAMILY Protein kinase-like (PK-like) 17 172 IPR011009 -
Pvu11g2016 218 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 88 201 - -
Pvu11g2016 218 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 75 - -
Pvu11g2016 218 Pfam Protein tyrosine and serine/threonine kinase 8 84 IPR001245 GO:0004672|GO:0006468
Pvu11g2016 218 Gene3D Transferase(Phosphotransferase) domain 1 88 186 - -
Pvu11g2016 218 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Pvu11g2016 218 Gene3D Transferase(Phosphotransferase) domain 1 6 87 - -
Pvu11g2016 218 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 11 75 - -
Pvu11g2016 218 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 88 201 - -
Pvu11g2016 218 ProSiteProfiles Protein kinase domain profile. 1 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2016 Pvu-Chr11 47021910 47022877 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2016 9 189 Receptor kinase-like Gene Family AT4G23150 47.343 4.28e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g2016 PK_Tyr_Ser-Thr 1.5e-10 CL0016