Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2015 ATGCCAGTCCTAGAAACACTTGGCGGTGCTCTTTTTGGCGCTGTTCTCCAGATGCTATTTGACAAGCTCGATTCTAATCAAATTCTCGACTACTTTCGTGGGAAAAAGCTCGATGAGAAGCTGCTGAAAAATTTGAAGAGGAAGTTGGTGTCCATCAATGCTGTGGTTGATGATGCAGAACTAAAGCAGTTCAGAAATGCATACGTTAAAGCGTGGCTTGACGAGGTCAGAGACGTGTTGCTGGACACAGAGGATCTGCTGGATGAAATAGACTATGAATTCTCCAAAACTCAGTCACAACTTCAATACCAAACCAGTTCTAACAAGGTACGCATTCTTGAATCCAAGCTGAAAGAAGTCCTAGAGGACCTTGAATCTCTTTTAAACCAAAAGGATGATCTAGGTCTGAAAAATGTTGGTGGTGTAAGATCGGAATTGGGTAATAAAGTGTTAGAGAAAAGAAATGAATCTTCATCGCTGGTGGCTGAAGAGGTTATTTATGGCAGAGATGAGGACAAACAAATTATCCTTAATTGGTTGACATCTGACACTAACAATCATAACCAACTGTCAATACTTTCTATTGTGGGTATGGGCGGGATGGGTAAGACCACACTTGCTCAACATGTATACAACGACCCAATGATAGAGGCTATGTTTGCTATCAAAGCCTGGGTTTGTGTTTCTGATGAATTTGATGTTTTCATGTTAACCAGAGCAATTTTTGAGTCAATCCGTAAGGAAACTGATAATAGCAGAAACCTAGAAATGGTTCAGGGACGATTGAAAGAAAAATTGAATGGAATGAAGTTTTTTCTGGTTCTGGATGATGTTTGGAACGAACACCGAGACCAATGGAAATCATTGCAAACTCCTCTTAAATATGGTGCTAAGGGAAGTAAAATTCTTGTCACAACACGCATCAACAAAGTTGCTTCTATCATGGAGTCAAACAAGATTCACAACCTAAAGCAATTACAAAAAGATCACAGCTGGCAAGTTTTTGCTAAACATGCATTTCAAGTTGATAATTCTAATTTTGTGTTGGAGGAGATTGGCATGAAGATAGTTGAAAAGTGCCAAGGACTGCCTCTGGCCCTTGAAACTGTAGGAGGTCTTTTACAATCAAAGTCATCTATTTTAGAGTGGGAAGGCGTATTGAGAAGCAACATATGGGACTTAGCAATAGAAGATAGTAAAATCATCCCCGCTTTGTTATTGAGCTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTCGCTTATTGTGCGTTATTCCCCAAAGACCATATGTTTGATAAGGAGAACTTAATTTTCTCATGGATGGCTGAAAATTTTCTACAATGCTCTCAGCAGAGTGAAATCTGCTTCAGGTTGGGTGTTGATAGAGCAGAAAGAGTACCAAAGACCACTCGTCACTTTTCAAATATAAAGAATCCTTTTGAACGTGATGAGCTTAGGATTTTAGGTGATGCTAAAAGGCTGCGAACATTTTTGTCCACATATAGGAATTATGGGATGTCAATACAAGAGTTGATCTCCAACTTTAAGTTCTTACGGGTCTTGTCTTTGTCTTCTCGTATCATAGAAGAGGTGCCTGACACAATAGATGATCTTATACATCTCCGTTCATTAGACCTTTCAAGGACACGCATAACAAGACTTCCCGACTCAATGTATTCACTCTGTAACTTGCAAGTGTTGAAGCTAAACGAATGTCTTCTTTTGAAGGAGTTGCCCTCAACTTTGCATGAGCTCACCAAGTTGCGTCGCCTTGAACTTAAGGGAACTTATTTAAGAAAGGCTCCAGTGCTTTTAGGAAAGTTGAAGAATCTTCAAGTATGGATGGGTGGGTTTGAGGTTGGCAAAAATAGTAGTGAGTTCAGTATTCAACAACTAGGACAACTTGATCTTCACAAGAATCTGTCAATTAGAAATCTTGAAAATATTGTGGATCCCTATGATGCATTGGCAGCGAATTTGAAGAATAAAATACATCTTGTGGAGCTACGTTTAAAATGGGATTTGAAGCTGAAAAATGAGGATTCAATAAAAGAAAGAGAAGTACTAGAGAATCTACAACCTTCCAGACATTTGGAGAAGTTGACAATCACAGGCTATTGTGGTACACAATTTCCAGGTTGGTTATCTGATAAATTTTTGTTGAATGTGGTGTCCTTAAGCTTGGAAAACTGCAAATATTGTCAATGGTTGCCTTCCTTGGGACTTTTGACATTTCTCAAGCATTTGAAAATTGAGGGCCTTGATGAGATAGTGAGGATAGGTGCTGATTTTAACGGGAATATCTCTTCTGCATTTGCATCCTTGGAAACGTTGAGGTTTACTAATATGAAAGAATGGGAAGAATGGGAATGCATGACGGGTGCTTTTCCAAAGCTTCATAGTCTTTTTGTAATTAAGTGTCCCAAACTGAAAGGGCACTTGCCAGAGCACCTTCCTCATTTAAAGAATCTAATAATTAGTATGTGCGAACAACTTGTGGCTTCGACTCCTAGAGCAGTAGAAATAGAAGGTGTGAAGATGGAGACTTCTTCATTTGATATGCTCCTATCTCATACTCCTATTCAATCCTTAACTATTTATCGTTGTCTGGGCATGAATATTCCTATAAACCATTGCTACCATTTTCTTGTAGAATTGCGTATCATTCAATGTTGTGACTCTCTCACGTACTTCCCTCTAGACTTATTTCCAAAACTCTACTACCTTACTTTATGCAAGTTTCGTAACTTACAGACGATAACACAAGAGCACCCTAATCATTTGAGGAGTGTGAGAATTGAAAAATGCTCTGAATTTGAAACATTTCCCAATGAAGGATTATTTGCACCTCAGCTAGAGACACTTCATATTGAAGGATTGGAGAAATTGAAATCAATGCCTAAACGCATGTCTGCCCTCCTTCCATCTCTTAATTATCTTTATATAATTAATTGTCCAGAAGTGGAGTTGTCTGAGGGATGTTTGCCATCAAATCTAAAACGCCTCTCTCTGTTGAAATGCTCCAAACTTGTTGCCTCACTAAAGGAGGGGGTTTGGGGAACCAACCCTTCCATAGAATCCTTGTCTATTCAAAAAGAGGATGGGGACTGTTTTCCGGATGAAGGTTTGCTCCCAGTCTCCCTTACTGTGCTACATATAAGAGATTGTCCAAATCTTAAGAAACTAAACTATGGTGGTCTTTGTCACCTCACCTCTCTTCAGTTTTTACGGTTTCTTAATTGTCCAATACTACAATATTTGCCAGCAGAGGGTCTACCGGAATCCATTTCACAACTCGTCATTCAATGCTGTCCTTTGCTCAAACAGCAGTACAAGAAAGAAGAAGGCGAAGAGTGGAAAAAGATTGCTCGCATCAAAAAGTGTATTGAGTAA 3396 0.391 MPVLETLGGALFGAVLQMLFDKLDSNQILDYFRGKKLDEKLLKNLKRKLVSINAVVDDAELKQFRNAYVKAWLDEVRDVLLDTEDLLDEIDYEFSKTQSQLQYQTSSNKVRILESKLKEVLEDLESLLNQKDDLGLKNVGGVRSELGNKVLEKRNESSSLVAEEVIYGRDEDKQIILNWLTSDTNNHNQLSILSIVGMGGMGKTTLAQHVYNDPMIEAMFAIKAWVCVSDEFDVFMLTRAIFESIRKETDNSRNLEMVQGRLKEKLNGMKFFLVLDDVWNEHRDQWKSLQTPLKYGAKGSKILVTTRINKVASIMESNKIHNLKQLQKDHSWQVFAKHAFQVDNSNFVLEEIGMKIVEKCQGLPLALETVGGLLQSKSSILEWEGVLRSNIWDLAIEDSKIIPALLLSYYHLPSHLKRCFAYCALFPKDHMFDKENLIFSWMAENFLQCSQQSEICFRLGVDRAERVPKTTRHFSNIKNPFERDELRILGDAKRLRTFLSTYRNYGMSIQELISNFKFLRVLSLSSRIIEEVPDTIDDLIHLRSLDLSRTRITRLPDSMYSLCNLQVLKLNECLLLKELPSTLHELTKLRRLELKGTYLRKAPVLLGKLKNLQVWMGGFEVGKNSSEFSIQQLGQLDLHKNLSIRNLENIVDPYDALAANLKNKIHLVELRLKWDLKLKNEDSIKEREVLENLQPSRHLEKLTITGYCGTQFPGWLSDKFLLNVVSLSLENCKYCQWLPSLGLLTFLKHLKIEGLDEIVRIGADFNGNISSAFASLETLRFTNMKEWEEWECMTGAFPKLHSLFVIKCPKLKGHLPEHLPHLKNLIISMCEQLVASTPRAVEIEGVKMETSSFDMLLSHTPIQSLTIYRCLGMNIPINHCYHFLVELRIIQCCDSLTYFPLDLFPKLYYLTLCKFRNLQTITQEHPNHLRSVRIEKCSEFETFPNEGLFAPQLETLHIEGLEKLKSMPKRMSALLPSLNYLYIINCPEVELSEGCLPSNLKRLSLLKCSKLVASLKEGVWGTNPSIESLSIQKEDGDCFPDEGLLPVSLTVLHIRDCPNLKKLNYGGLCHLTSLQFLRFLNCPILQYLPAEGLPESISQLVIQCCPLLKQQYKKEEGEEWKKIARIKKCIE* 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2015 1131 Gene3D - 16 131 - -
Pvu11g2015 1131 Gene3D - 146 321 IPR027417 -
Pvu11g2015 1131 Gene3D - 325 407 IPR042197 -
Pvu11g2015 1131 SUPERFAMILY L domain-like 864 1107 - -
Pvu11g2015 1131 PANTHER OS05G0414200 PROTEIN 27 870 - -
Pvu11g2015 1131 Gene3D - 408 465 IPR036388 -
Pvu11g2015 1131 SUPERFAMILY L domain-like 474 833 - -
Pvu11g2015 1131 Pfam Rx N-terminal domain 13 102 IPR041118 -
Pvu11g2015 1131 Coils Coil 110 137 - -
Pvu11g2015 1131 Gene3D Ribonuclease Inhibitor 880 1090 IPR032675 -
Pvu11g2015 1131 PANTHER DISEASE RESISTANCE PROTEIN RP 27 870 IPR044974 GO:0006952
Pvu11g2015 1131 PRINTS Disease resistance protein signature 192 207 - -
Pvu11g2015 1131 PRINTS Disease resistance protein signature 265 279 - -
Pvu11g2015 1131 PRINTS Disease resistance protein signature 360 374 - -
Pvu11g2015 1131 PRINTS Disease resistance protein signature 817 833 - -
Pvu11g2015 1131 Coils Coil 42 62 - -
Pvu11g2015 1131 Pfam NB-ARC domain 172 387 IPR002182 GO:0043531
Pvu11g2015 1131 Gene3D Ribonuclease Inhibitor 481 862 IPR032675 -
Pvu11g2015 1131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 423 IPR027417 -
Pvu11g2015 1131 Pfam Leucine rich repeat 541 599 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2015 Pvu-Chr11 47009677 47013464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2015 493 842 Receptor kinase-like Gene Family AT4G13920 25.806 2.13e-09 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2015 11 47009677 47013464 Pvu11g2015 11 47009677 47013464 ECH