Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2014 ATGCCGCTTCTTGAAACTCTTGGTGGTGCTCTTTTTGGTGCTGTTCTCCAGGTCCTATTTGACAAGCTGGATTCTCATCAAGTTCTGGACTACTTTCGTGGGAGAAAGCTGGATGAGAAGCTGCTCAAAAATTTGAGGAGGAAGTTGGTGTCCATCAATGCTGTGGTTGATGATGCAGAACTAAAGCAGTTCAGAAATCCATATGTTAAAGCGTGGCTTGATGAGGTCAGAGACGTGTTGCTGGACACAGAGGATCTGCTGGATGAAATAGACTATGAATTCTCCAAAACTCAGTCACAACTTCAATACCAAACCAGTTCTAACAAGGTACGCATTCTTGAATCCAAGCTGAAAGAACTCCTAGATGACCTTGAATCTCTTTTAAACCAAAAGGATGATCTAGGTCTCAAAAATGTTAGTGGTGTGGGATCGGAATTGGGTAATAAAGTGTTAGAGAAAAGAAATGAATCCTCGTCGTTGGTGGCTGAAGAGGTTATTTATGGCAGAGATGAGGACAAACAAATTATTCTTAATTGGCTGACATCAGACAATGGAAATCATAACCACCTTTCAATACATTCTGTTGTGGGTATGGGCGGGATGGGTAAGACCACACTTGCTCAACATGTATACAACCACCCAATCACAAAGGATATATTTGCTATCAAAGCCTGGGTCTGCGTTTCTGATGAATTCGATGTTTTCAAGTTAACCAGAGCAATTCTTGAAGCAATTCATAAGTCAACTGATGATAGCAGAAACTTAGAAATGGTTCAGGGACGATTGAAAGAATCATTGACAGGAAGGAAGTTTCTTTTGGTTCTTGATGATGTTTGGAACGAACACCGAGATCAATGGAAATCATTGCAAACTCCACTTAAATATGGTGCTAAGGGAAGTAAAATTCTTATCACAACACGCATTAATAAAGTTGCTTCTACCATGGAGTCAAACACTATTCACAAACTAAAGCAATTAGAAAAAGATCACAGTTGGCAAGTTTTTGCTAAACATGCATTTCAAGATGATAACTCTAAGTCGAATTCTGTGTTGGAGGAGATTGGCATGAAGATAGTTGAAAAGTGTCAAGGACTGCCTTTGGCCCTTGAAACGGTAGGAGGTCTCTTACAGTCAAAGTCATCTGTTTCAGAGTGGGAAGGTGTACTGAGAAGCAACATATGGGACTTACCAATAGAAGATAGTAAAATCATCCCCGCTTTGTTATTAAGCTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTCACTTATTGTGCGTTATTCCCCAAAGACCATAAGTTTGATAAGGAGAGCCTAATTTTCTCATGGATGGCTGAAAATTTTCTACAATGCTCTCATCAAAGTAAGTCTCCAGAAAAAGTAGGTGAACAGTACTTCAATGATCTAATATCAAGGTCATTCTTTCAGCAGTCCATTTGGAACAACCAAACACATTTTGTGATGCACGACCTTCTGAATGATTTAGCAAAATATGTTTCTGGTGAAATGTGTTACAGGTTGGGTGTTGATAGACCAGGAAGCATACCAAAGACTACCCGCCACTTTTCAACGCTAAAGAATCCTATTGAATGTGTCGAGTATAGGAGTTTATGTGATGCTAAAAGGCTACGAACATTTCTGTCCAAGAGTTGTGGGATGTCAATCCAAGAGTTGATCTCCAACTTTAAGTTCTTACGCCTCTTATCTTTGTCTTCTTGTTTCATAGAAGAGGTGCCTGACACTATAGCCGATCTTATACATCTCCGTTCATTAGACCTTTCAAGCACACGCATAACAAGACTTCCCGACTCAATGTGTTCACTCTATAACTTGCAAGTGTTGAAGCTCAACGATTGTAACCTTCTGAAGGAGCTGCCCTCGACTTTGCATGAGCTCACTAAGTTGTGCCGCCTTGAACTTAAGGGAACTACTTTGAGAAAGGTTCCAGTGCTTTTAGGAAAGTTGAAAAATCTTCAAGTATGGATGAGTAGGTTTGAGGTTTGCAAAAGTAGTAATGAGGTCAGCAATATTCAACAACTAGGACAACTTGATCTTCACGGAAAGCTGTCAATTCAAAATCTTGAAAATATTGTGGATCCCTGTGATGCATTAGCAGTGGATTTGAAGAATAAAACACATGTTGTGGAGCTAAGTTTAGAATGGGATTCGCAGCGGAACAATGAGAATTCAATAAAAGAAAAACAAGTACTAGAGAATCTGCAACCTTCCAAACATTTGGAGTGGTTGTTAATCGTTTCCTATGGTGGCACACAATTTCCCCGTTGGTTATCTGATAATTCTTTATTGAATGTGGTGTCCTTAGTTTTGGTGGACTGTAAACATTGCTTGCAATTGCCTTCCCTTGGACTTTTGACATTTCTCAAGGAGTTGACAATTGACGGCCTTGATCAGATAGTGAGGATAGATGTTGATTTTTATGGGAATAGCTCATCTGCATTTGCATCATTGAAAGAGTTGACATTTAGGGGTATGAAGGAATGGGAAGAATGGAAATGCATGTCGTGTGCTTTTCCAAGTCTTGAAAGACTTTTTGTACTTCGTTGTCCCAAATTGAAAGGGCACTTGCCAGAGCACCTTCCCCATTTAAGGCTTCTAAGAATTGCTCGGTGCGAACAACTTGTGGCTTCGACTCCGAAGGCGTTAGAAATTGAAGGTGTGAAGACGAAGACATCTTCATTTAATATATTAGGGCTCCTCGTATCTGATACACCTTTTGAATCCTTGTGGATTGAATCTTGTCCGGGCATTAATATTCCCATAAACCATTGCTACCATTTTCTTGTAGACTTGCGTATCACTCAATGTTGTGACTCTCTCACAAACTTCCCTCTAGACTTGTTCCCAAAACTCGGCCTCCTTATTTTGGAAGGATGTCATAACCTGCAGATGATATCACAGGCGCACCCTCATTGTCATTTGATGTATTTGAAAATTAAAAAATGTTGTGAATTTGAATCATTTTCCAATGAAGGATTATCTGCACCAGAGCTAAAGATAATTCGTATTGAAGAATTGGAGAAATTGAAATTAATGCCTAAACTCATGTCCACTCTCCTTCCATCTCTCAATCATCTGTATATATATAATTGTCCAGGAGTGGAATTGTCTGAGGGATGTTTTCCATCAAATATGAAAGAAATGAGGCTCTTTAGTTGCTCCAAACTTATTACCTCACTAAAGAAGGGGGTTTGGGGAACCAACCCTTCCATAGAATTCTTGTTTATTCAAAATGTGGATGTGGAGTGTTTTCCGGGGGAAGGTTTGCTCCCAGTCTCCCTTACTAAGCTATACATAAATTATTTTCCAAATCTTAAGAAACTGGACTACAGGGGTCTCTGTCACCTCTCCTCTCTTCAGAAATTGGTTATTGAAAATTGTCCAATACTCCAATGTTTGCCAGAGGAGGGTTTACCCGAATCCATTTCAGAACTCAGAATTGAAAGTTGCCCGTTGCTCAAACAGCGGTGCAAGAAAGAAGAAGGCGAAGATTGGGAAAAGATTGCTCACATTAAAACTATATGGCTTGATATGGAAGCAGTAAACATATAA 3570 0.3961 MPLLETLGGALFGAVLQVLFDKLDSHQVLDYFRGRKLDEKLLKNLRRKLVSINAVVDDAELKQFRNPYVKAWLDEVRDVLLDTEDLLDEIDYEFSKTQSQLQYQTSSNKVRILESKLKELLDDLESLLNQKDDLGLKNVSGVGSELGNKVLEKRNESSSLVAEEVIYGRDEDKQIILNWLTSDNGNHNHLSIHSVVGMGGMGKTTLAQHVYNHPITKDIFAIKAWVCVSDEFDVFKLTRAILEAIHKSTDDSRNLEMVQGRLKESLTGRKFLLVLDDVWNEHRDQWKSLQTPLKYGAKGSKILITTRINKVASTMESNTIHKLKQLEKDHSWQVFAKHAFQDDNSKSNSVLEEIGMKIVEKCQGLPLALETVGGLLQSKSSVSEWEGVLRSNIWDLPIEDSKIIPALLLSYYHLPSHLKRCFTYCALFPKDHKFDKESLIFSWMAENFLQCSHQSKSPEKVGEQYFNDLISRSFFQQSIWNNQTHFVMHDLLNDLAKYVSGEMCYRLGVDRPGSIPKTTRHFSTLKNPIECVEYRSLCDAKRLRTFLSKSCGMSIQELISNFKFLRLLSLSSCFIEEVPDTIADLIHLRSLDLSSTRITRLPDSMCSLYNLQVLKLNDCNLLKELPSTLHELTKLCRLELKGTTLRKVPVLLGKLKNLQVWMSRFEVCKSSNEVSNIQQLGQLDLHGKLSIQNLENIVDPCDALAVDLKNKTHVVELSLEWDSQRNNENSIKEKQVLENLQPSKHLEWLLIVSYGGTQFPRWLSDNSLLNVVSLVLVDCKHCLQLPSLGLLTFLKELTIDGLDQIVRIDVDFYGNSSSAFASLKELTFRGMKEWEEWKCMSCAFPSLERLFVLRCPKLKGHLPEHLPHLRLLRIARCEQLVASTPKALEIEGVKTKTSSFNILGLLVSDTPFESLWIESCPGINIPINHCYHFLVDLRITQCCDSLTNFPLDLFPKLGLLILEGCHNLQMISQAHPHCHLMYLKIKKCCEFESFSNEGLSAPELKIIRIEELEKLKLMPKLMSTLLPSLNHLYIYNCPGVELSEGCFPSNMKEMRLFSCSKLITSLKKGVWGTNPSIEFLFIQNVDVECFPGEGLLPVSLTKLYINYFPNLKKLDYRGLCHLSSLQKLVIENCPILQCLPEEGLPESISELRIESCPLLKQRCKKEEGEDWEKIAHIKTIWLDMEAVNI* 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2014 1189 Gene3D - 325 409 IPR042197 -
Pvu11g2014 1189 Pfam Leucine rich repeat 565 621 IPR001611 GO:0005515
Pvu11g2014 1189 Gene3D - 16 129 - -
Pvu11g2014 1189 PRINTS Disease resistance protein signature 192 207 - -
Pvu11g2014 1189 PRINTS Disease resistance protein signature 265 279 - -
Pvu11g2014 1189 PRINTS Disease resistance protein signature 362 376 - -
Pvu11g2014 1189 PRINTS Disease resistance protein signature 606 622 - -
Pvu11g2014 1189 Pfam Rx N-terminal domain 13 102 IPR041118 -
Pvu11g2014 1189 SUPERFAMILY L domain-like 915 1175 - -
Pvu11g2014 1189 ProSiteProfiles Leucine-rich repeat profile. 587 608 IPR001611 GO:0005515
Pvu11g2014 1189 Gene3D - 410 498 IPR036388 -
Pvu11g2014 1189 Gene3D Ribonuclease Inhibitor 536 924 IPR032675 -
Pvu11g2014 1189 Gene3D Ribonuclease Inhibitor 1023 1170 IPR032675 -
Pvu11g2014 1189 SUPERFAMILY L domain-like 487 885 - -
Pvu11g2014 1189 Gene3D - 147 322 IPR027417 -
Pvu11g2014 1189 PANTHER DISEASE RESISTANCE PROTEIN RP 27 868 IPR044974 GO:0006952
Pvu11g2014 1189 Coils Coil 103 137 - -
Pvu11g2014 1189 Pfam NB-ARC domain 172 389 IPR002182 GO:0043531
Pvu11g2014 1189 PANTHER OS05G0414200 PROTEIN 27 868 - -
Pvu11g2014 1189 Coils Coil 42 62 - -
Pvu11g2014 1189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 425 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2014 Pvu-Chr11 46986934 46992112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2014 555 688 Receptor kinase-like Gene Family AT4G13920 30.719 1.36e-10 63.9