Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2008 ATGCCACTCCTTCAAACTCTTGGAGGTGCTCTTTTTGGAGCTGTTCTCCAGGTCCTATTTCACAAGCTCGATTCTAATCAAGTTCTGGACTACTTTCGTGGGAGAAAGCTGGATGAGAAGCTGCTCAAAAATATGAGGAGGAAGTTGGTGTCCATCAATGCTGTGGTTGATGATGCAGAACTAAAGAAGTTCAGAAATCCATATGTTAAATCATGGCTTGATGATGTCAGAGACGTGTTGCTGGACACAGAGGATCTGCTGGATGAAATAGACTATGAATTCTCCAAAACTGAGTCACAACTTCAATACCAAACCAGTTCTAACAAGGTACGCACTCTTGAATCCAAGTTGAAAGAACTCCTAGATGACCTTGAATCTCTGTTAAACCAAAAGGATGATCTAGGTCTGAAAAATGTTGGTGGTGTGGGATCGGAATTGGGTAATAAAGTGTTAGAGAAAAGAAATGAATCTTCATCGTTGGTGGCTGAAGAGGTTATTTATGGCAGAGATGAGGATAAAGAAATCATCCTTGATTGGTTGACATCTGAGAGTAATAATCATAATCAACTCTCAATACTTTCTATTGTGGGCATGGCGGGATGGGCTAAATTTCCTATCAAAGTCTGGGCTTGTGTCTCTGATGAATTCGATGTTTTTAAGTTAACCAGAACAATTCTTGAGGCAATTCATAAGTCAACTGATGATAGCAGAAACCTAGAAATGGTTCAGGGACGATTGAAAGAATCATTGACAGGAAGGAATTTTCTTCTAGTTCTTGATGATGTTTGGAACGATCACCGAGACCAATGGAAATCATTGCAAACTCCTCTTAAATATGGTGCTAAGGGAAGTAAAGTTCTTGTCACAACACGCATTAACAAAGTTGCTTCTACCATGGAGTCAAACAAGATTCACCAACTAAAGCAATTACGAAAAGATCATAGTTGGCAAGTTTTTGCTGCACATGCATTTCAATATGATAACTCTAAGTCGAATTCTGTGTTGGAGGACATTGGCATGAAGATAGTTGAAAAGTGTCAAGGACTACCTCTGGCCCTTGAAACGATAGGATGTCTTTTACGGTCAAAGTCATCAGTTTCAGAGTGGGAAGGCTTACTGAGAAGCAACACATGGGACTTACCAATAGAAGATAGTAAAATCATCCCCGCTTTGTTATTGAGTTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTCGCTTATTGTGCGTTATTCCCCAAAGGACATATGTTTGACAAGGAGAGCTTAATTTTCTCATGGATGGCTGAAAATTTTCTACAATGCTCTCGACAGAGTAAGTCTCTAGAAGAAGTAGGTGAACAATATTTTAATGATATGTTATCAAGGTCATTCTTTCAAAAGTCAATTATACAAGATATAATGTACAACAAAACACGTTTTGTGATGCATGACCTTCTAAATGATTTAGCAAAATATGTTTCTGGTGAAATGTGCTACAGGTTGGGTGTTGATAGACCAGGAAGCGTACCAAAGACTACCCGTCACTTTTCAACGATAAAGAATCCTGTAGAATGTGATGAGTATAGGAGTTTATGTGATTCTAAAAAGCTACGAACATTTATGTCCATATCCAGGAATTGTGGGATGTCAATACAAGAGTTGGTCTCCAACTTTAAGTGCTTACGACTCTTATCTTTGTTTGATTGTCATAACATAAAAGAGGTGCCTGACACTATAGCCGATCTTATACATCTCTGTTCATTAGACCTTTCAAGCACATGCATAAAAACACTTCCCAACTCAATATGTTCACTCTATAACTTGCAAGTGTTGAAGCTAAACTATTGTTCCCATTTGAAGGAGCTACCCTCGAATTTGCATGAGCTCACTAAGTTGCGTCTCCTTGAACTTATTGGAACTTCATTAAGAAAGGCTCCAGTTATTTTAGGAAAGTTGAAATACCTTCAAGTATGGATGGGTGGGTTTGAGGTTGGCAAAAGCGATGAGTCCAATATTGAACAACTAGGAGAACTTGATGTTCACGGAGAGCTGTCAATTAAAAATATTGAAAATATGGTGAATCCCTATGATGCATTGGAAGTGGATTTGAAGACTAAAAAAAATCTTGTGGGGTTACATTTAAAATGGAGTTTGGAGTGCAACAATGACGAATCAATAAAGGAAAGAGAAATACTAGAGAATCTGCAACCATGCAGACATTTGGAGAAGTTGTCAATTGATGGCTATGGTGGAACACAATTTCCCCATTGGTTATCTGACAATTCTCTATTGAATGTGGTTTCCTTAACTTTGATGAACTGTAAACATTGCTTGCAGTTGCCTTCCCTTGGAATTTTAACATTTCTCAAGTACTTGAAAATTTACGGCCTTCATCAGATAGTGCAGATAGATGCTAACTTTTACGGGAATAGCTCATATGCATTTGCATCCTTGGAAACGTTGATCTTTGATGATATGAAGGAATGGGAAGAATGGGAATGCAACACAAGTGCTTTTCCAAGTCTTCAACATCTTTCTATGTGGAATTGTCCGAAATTTAAAGGGCACTTGTTAGAACACCTTTCTCATTTAAAGTATCAAACTATTGATGTTTGCAAACAACTTGAGACTTCGAATATAGAAATTGAAGGTGTGAAGATGGAGACATTTTCATTTGATATGCTCTTATCTCATACTCCTCTTCAATCCTTAAATATTTTTTGTTGTCCAAGCATGAACATTCCCATAAATCATTCCTACCATTTTCTTGTAGAATTGCGTATCATTCAATGTTGTGACTCTCTCACTAACTTCCCTCTAGACTTGTTTCCAAAACTTTCTTACCTTCGTTTAAACGAATGTCATAACCTGCAGATGATATCTCAAGGGCACCCTCACGGTCATTTGAAGAGTCTGACAATTAGAAAATGCTCTAAATTTGAATCATTTCCCAATGAAGGATTATTTGCACCTCAGCTAGAGAGTTTTTGGATTGAAGGATTGGAGAAATTGAAATCAATGCCTAAACGTATGCCTGCCCTCCTTCCATCTCTTAATAATCTGTATATAAATAATTGTCCAGAAGTGGAGTCGTCTGACGGATGTCTGCCATCAAATCTAAAACACATTTCTCTCTTGAATTGCTCCAAAGTTGTTGCCTCACTAAAGAAGGGGGTTTGGGAAACCAACCCTTCCATAAAATCCTTGTTTATTCAAAAAGAGGATGCAAAATGTTTCCCAGGTGAAGAGTTGCTGCTCAGTAATTGTCCAATACTCCAATGTTTGCTAGAGGAGGGTCTGCCAGAATCCCTTTCACAACTCAGAATTACACACTGTTCGTTGCTCAAAAAACACTACAAGAAAGAAGAAGTCGTAGACTGGAAAAAGATTGTTCTCATTTAA 3384 0.3794 MPLLQTLGGALFGAVLQVLFHKLDSNQVLDYFRGRKLDEKLLKNMRRKLVSINAVVDDAELKKFRNPYVKSWLDDVRDVLLDTEDLLDEIDYEFSKTESQLQYQTSSNKVRTLESKLKELLDDLESLLNQKDDLGLKNVGGVGSELGNKVLEKRNESSSLVAEEVIYGRDEDKEIILDWLTSESNNHNQLSILSIVGMAGWAKFPIKVWACVSDEFDVFKLTRTILEAIHKSTDDSRNLEMVQGRLKESLTGRNFLLVLDDVWNDHRDQWKSLQTPLKYGAKGSKVLVTTRINKVASTMESNKIHQLKQLRKDHSWQVFAAHAFQYDNSKSNSVLEDIGMKIVEKCQGLPLALETIGCLLRSKSSVSEWEGLLRSNTWDLPIEDSKIIPALLLSYYHLPSHLKRCFAYCALFPKGHMFDKESLIFSWMAENFLQCSRQSKSLEEVGEQYFNDMLSRSFFQKSIIQDIMYNKTRFVMHDLLNDLAKYVSGEMCYRLGVDRPGSVPKTTRHFSTIKNPVECDEYRSLCDSKKLRTFMSISRNCGMSIQELVSNFKCLRLLSLFDCHNIKEVPDTIADLIHLCSLDLSSTCIKTLPNSICSLYNLQVLKLNYCSHLKELPSNLHELTKLRLLELIGTSLRKAPVILGKLKYLQVWMGGFEVGKSDESNIEQLGELDVHGELSIKNIENMVNPYDALEVDLKTKKNLVGLHLKWSLECNNDESIKEREILENLQPCRHLEKLSIDGYGGTQFPHWLSDNSLLNVVSLTLMNCKHCLQLPSLGILTFLKYLKIYGLHQIVQIDANFYGNSSYAFASLETLIFDDMKEWEEWECNTSAFPSLQHLSMWNCPKFKGHLLEHLSHLKYQTIDVCKQLETSNIEIEGVKMETFSFDMLLSHTPLQSLNIFCCPSMNIPINHSYHFLVELRIIQCCDSLTNFPLDLFPKLSYLRLNECHNLQMISQGHPHGHLKSLTIRKCSKFESFPNEGLFAPQLESFWIEGLEKLKSMPKRMPALLPSLNNLYINNCPEVESSDGCLPSNLKHISLLNCSKVVASLKKGVWETNPSIKSLFIQKEDAKCFPGEELLLSNCPILQCLLEEGLPESLSQLRITHCSLLKKHYKKEEVVDWKKIVLI* 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2008 1127 Gene3D - 157 308 IPR027417 -
Pvu11g2008 1127 SUPERFAMILY L domain-like 889 1110 - -
Pvu11g2008 1127 SUPERFAMILY L domain-like 475 870 - -
Pvu11g2008 1127 PANTHER DISEASE RESISTANCE PROTEIN RP 27 905 IPR044974 GO:0006952
Pvu11g2008 1127 Pfam Rx N-terminal domain 13 101 IPR041118 -
Pvu11g2008 1127 Coils Coil 103 137 - -
Pvu11g2008 1127 Coils Coil 42 62 - -
Pvu11g2008 1127 Gene3D Ribonuclease Inhibitor 876 1126 IPR032675 -
Pvu11g2008 1127 Gene3D - 394 486 IPR036388 -
Pvu11g2008 1127 Gene3D - 309 393 IPR042197 -
Pvu11g2008 1127 Pfam NB-ARC domain 203 373 IPR002182 GO:0043531
Pvu11g2008 1127 Gene3D Ribonuclease Inhibitor 504 653 IPR032675 -
Pvu11g2008 1127 Gene3D - 16 129 - -
Pvu11g2008 1127 Gene3D Ribonuclease Inhibitor 661 875 IPR032675 -
Pvu11g2008 1127 PRINTS Disease resistance protein signature 192 207 - -
Pvu11g2008 1127 PRINTS Disease resistance protein signature 249 263 - -
Pvu11g2008 1127 PRINTS Disease resistance protein signature 346 360 - -
Pvu11g2008 1127 PRINTS Disease resistance protein signature 597 613 - -
Pvu11g2008 1127 PANTHER OS05G0414200 PROTEIN 27 905 - -
Pvu11g2008 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 409 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2008 Pvu-Chr11 46957460 46960984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2008 551 651 Receptor kinase-like Gene Family AT4G13920 35.577 2.17e-06 50.1