Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2007 ATGCCAGACCTTGAAACTCTTGGTGGTGCTCTTTTTGGTGCTCTTCTCCAGCTCCTAGTTGACAAGCTCGATTCTCCTCCACTTCTCCACTACTTTCGTGGGAGAAAGCTCGATGAGCTGCTGAAAAATTTGAGGAGCAAGTTGGTGTCCATCAATACCGTGATTGATGATGCAGAACAAAACCAGTTCAGAAGTCCATATGTTAAAGCGTGGCATGATGAGGTCAGAGACGTCTTGCTGGACACAGAGGATCTCCTGGATGAAATAGACTATGAATTCTCCAAAACTGAGTTGAAAGCTGAATATCAGAGCAGTGCTAGCAAGGTAAGCAGTTTTGAATCCAAGATGAAAGAACTCCTAGATCTACTAGAATCTCTCTTAAACCAAAAGATTGTTCAAGATTTCAAAATTTCTAGTGGTGTTGGATCTGGGTTGGCTAATAACGTGTTATGGAAAACAAATGAATCCTCATCGTTGGTGGCTCAAGAGATTATTTATGGCAGAGATGAGGACAAACAAATTATCCTTAAGTGGCTTACTTTTGAGAAAAACAATCTGTCAATACTTTCTATTGTGGGTATGGGCGGTATAGGTAAGACCGCACTTGCTCAACATGTATATAACGACCCAATGATAAACGCTATATTTTCTATCAAAGTCTTGGTTTGTGTATCTGGTGAATTCGATGTTTTTTTGTTAACCCAAAGAATTCTTGAGTCAATCTGTATGGAAACGGATAATAGTAGAAACCTAGAAATGGTTCAGGGAAAATTGAAAGAAAAATTGAAAGGAAAGAAGTTTCTTTTGGTTTTGGATGATGTTTGGAATGAATACCGAGAACATTGGAAAGCTTTGCAAACTCCTCTCAAATGTGGGGCTAGGGGAAGTAAAATTCTTATCACAACACGCAGTCACAGAGTTGCTTCTATCATGGAGTCAAACAATATTTACAAACTAGAGCAATTACAAGAAGATCATAGCTGGCAAGTTTTTGCTAGACATGCATTCGAAGATGCTAACTCTAAGTCAAATTCTGTGTTGGAGGAGATTGGCAAGAAGATAGTTGAAAAGTGCCAAGGACTGCCTTTGGCTATTGAAACGGTAGGACGTCTTTTACGGTCAAAGTCATCTGTTTCAGAGTGGGAAGATGTACTGAGTAGCAACATATGGGACTTACCAATAAACGATAGTAATGTCATCCCCGCTTTGTTATTGAGCTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTTGCTTATTGTGCGTTATTCCCCAAAGGCCACATATTTGACAAGGAGTACTTAATTTTCTTATGGATGTCTGAAAATTTTCTACAATGCTCTCAGCAGAGTAAGTCTCCAGAAGAAGTAGGTGAACAATACTTCAATGATCTATTATCAAGGTCATTCTTTCAGCAGTCAATTGGGTTATTCCAAAATTGTTTTGTAATGCACAACCTTCTGATTGATTTAGCAAAATATGTTTCTGGTGAAATCTGTTACAGGTTAGGTGTTGATAGAGCAAAAAGAGTACCAAACACCACCCGTCACTTTTCAATTGTAAATCATTCTTTTCAATGTGATGAGTATAGGAGTTTATTAGAAGTTAAAAGGTTGCGGACATTTTTGTCCAGATTTGGGAATTATGGGATGTCAATACAAGAGTTGATCACCAACTTTAAGTTCTTACGGGTCTTGTCTTTGTCTTGCTGTTTTAACGTAAAAGAGGTGCCTGATAATATAGCCGATCTTATACATCTCCGTTCATTAGACCTTTCAAGCACACTCATAAAGAGACTTCCTGACTCAATATGTTCACTCTATAACTTGCAAGTGTTGAAGCTAAACAACTGTAGGGCTTTGAAGGAGCTGCCCTCAACTTTGCATGAGCTCACTAAGTTGCGTCACCTTGAACTTAAGGGAACTACTTTAAGAAAGGCTCCAATTCTCTTAGGAAAGTTGAAGAATCTTCAAGTATGGATGGGTGGGTTTGAGGTTGGCAAAAGTAGTAGTGAGTTCAATATTCAACAACTAGGAGAACTTGATCTGCAACCAAGACATTTGGAGCAATTGTCAATCCTTAACTATTGTGGCACACAATTTCCAGGTTGGTTATCTGATAAGTTTCTATTGAATATGTTGTCCTTAACCTTGAAAGACTGCAAATATTGTCAACGATTGCCTTCTTCCCTTGGACTTTTGACATTTCTCAAGAAATTGGAAATTGGCGGACTTGATTACATTGTGAGTATAGATGCTGATTTTTACGGGAATAACTCTTCTACATTTGCATCCTTGGAAACGTTGTGGTTTACTAATATGAAGGAATGGAAAGAATGGCAATGCATGACAGGTGCTTTTCCAAGACTTCAAAGTCTTTTTCTAATTAATTGTCCCAAACTGAAAGGACACTTGCCAGAGCACCTTCCTCATTTAAAAGAACTAACTATTGTTGAATGCGAACAACTTGTGGCTTCGACTCCCAGGACAGTAGAAATTGAAGGAGTGAATATGAAGACATCTTCATTTGATACGCTCCTATCTCATACTCCTCTAGAATACTTGGGTATTCGCCGTTGTCCGGGCATGAATATTCCCAGAAACCATTGCTACCATTTCCTCGTAGAGTTGATTATCAATGAATGTTGTTGTTACTCCCTCACAAACTTCTATTTAGACTTATTCCCAAAACTCCGCAACCTTATTTTATACGGATGTCATAACCTACAGATGATATCACAAGGGCACTCTCAATGTCATTTGAAGTCTCTAACAATTGAAAAATGCTCTGAGTTTGAATCATTTCCCAATAGAGGATTAGTTGCACCGGAGCTAGAGACATTTTACATTAGAGGATTGGAGAAATTGAAATCAATGCCTAAACGCATGTCTACCCTCCTTCCATCTCTTAATAATCTAGATATATGTAATTGTCCAAGACTGGAGTTGTCTGAGGGATGTTTGCCATCAAATCTAAAAGAAATGCGTCTTTTGAATTGCTCCAAACTTGTTGCCTCACTAAAGAAGGGGGTTTACGAAACTAACCCTTCCCTAAAATTCTTGTCTATTCAAAAGGACTATGTAGAGTGTTTTCCGGATGAAGGTTTGCTCCCACTCTCTCTTACTGAGCTAAATATAAAAGATTGTCGAAATCTTAAGAAACTAGAGTACAGGGGTCTCTGA 3183 0.3845 MPDLETLGGALFGALLQLLVDKLDSPPLLHYFRGRKLDELLKNLRSKLVSINTVIDDAEQNQFRSPYVKAWHDEVRDVLLDTEDLLDEIDYEFSKTELKAEYQSSASKVSSFESKMKELLDLLESLLNQKIVQDFKISSGVGSGLANNVLWKTNESSSLVAQEIIYGRDEDKQIILKWLTFEKNNLSILSIVGMGGIGKTALAQHVYNDPMINAIFSIKVLVCVSGEFDVFLLTQRILESICMETDNSRNLEMVQGKLKEKLKGKKFLLVLDDVWNEYREHWKALQTPLKCGARGSKILITTRSHRVASIMESNNIYKLEQLQEDHSWQVFARHAFEDANSKSNSVLEEIGKKIVEKCQGLPLAIETVGRLLRSKSSVSEWEDVLSSNIWDLPINDSNVIPALLLSYYHLPSHLKRCFAYCALFPKGHIFDKEYLIFLWMSENFLQCSQQSKSPEEVGEQYFNDLLSRSFFQQSIGLFQNCFVMHNLLIDLAKYVSGEICYRLGVDRAKRVPNTTRHFSIVNHSFQCDEYRSLLEVKRLRTFLSRFGNYGMSIQELITNFKFLRVLSLSCCFNVKEVPDNIADLIHLRSLDLSSTLIKRLPDSICSLYNLQVLKLNNCRALKELPSTLHELTKLRHLELKGTTLRKAPILLGKLKNLQVWMGGFEVGKSSSEFNIQQLGELDLQPRHLEQLSILNYCGTQFPGWLSDKFLLNMLSLTLKDCKYCQRLPSSLGLLTFLKKLEIGGLDYIVSIDADFYGNNSSTFASLETLWFTNMKEWKEWQCMTGAFPRLQSLFLINCPKLKGHLPEHLPHLKELTIVECEQLVASTPRTVEIEGVNMKTSSFDTLLSHTPLEYLGIRRCPGMNIPRNHCYHFLVELIINECCCYSLTNFYLDLFPKLRNLILYGCHNLQMISQGHSQCHLKSLTIEKCSEFESFPNRGLVAPELETFYIRGLEKLKSMPKRMSTLLPSLNNLDICNCPRLELSEGCLPSNLKEMRLLNCSKLVASLKKGVYETNPSLKFLSIQKDYVECFPDEGLLPLSLTELNIKDCRNLKKLEYRGL* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2007 1060 PANTHER OS05G0414200 PROTEIN 35 935 - -
Pvu11g2007 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 421 IPR027417 -
Pvu11g2007 1060 Pfam Rx N-terminal domain 14 104 IPR041118 -
Pvu11g2007 1060 Gene3D Ribonuclease Inhibitor 833 1058 IPR032675 -
Pvu11g2007 1060 Coils Coil 41 61 - -
Pvu11g2007 1060 Gene3D Ribonuclease Inhibitor 528 660 IPR032675 -
Pvu11g2007 1060 Gene3D Ribonuclease Inhibitor 665 832 IPR032675 -
Pvu11g2007 1060 SUPERFAMILY L domain-like 844 1053 - -
Pvu11g2007 1060 Pfam NB-ARC domain 171 386 IPR002182 GO:0043531
Pvu11g2007 1060 Gene3D - 321 405 IPR042197 -
Pvu11g2007 1060 PANTHER DISEASE RESISTANCE PROTEIN RP 35 935 IPR044974 GO:0006952
Pvu11g2007 1060 SUPERFAMILY L domain-like 483 819 - -
Pvu11g2007 1060 Gene3D - 11 127 - -
Pvu11g2007 1060 PRINTS Disease resistance protein signature 188 203 - -
Pvu11g2007 1060 PRINTS Disease resistance protein signature 261 275 - -
Pvu11g2007 1060 PRINTS Disease resistance protein signature 358 372 - -
Pvu11g2007 1060 PRINTS Disease resistance protein signature 605 621 - -
Pvu11g2007 1060 Gene3D - 406 494 IPR036388 -
Pvu11g2007 1060 Gene3D - 150 320 IPR027417 -
Pvu11g2007 1060 Coils Coil 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2007 Pvu-Chr11 46949131 46953200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2007 532 849 Receptor kinase-like Gene Family AT4G13920 24.786 7.60e-11 64.7