Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2004 ATGCCAGTCCTAGAAACACTTGGTGGTGCTCTTTTTTGTGCTGTTCTCCAGATGCTATTTGACAAGCTGGATTCTCATCAAGTTCTGGACTACTTTCGAGGGAGAAAGCTAGATGAGAGGCTGCTGAAAAAGTTGAAGAGGAAGCTCATGGACATCAATGCTGTGGTTGATGATGCAGAACAAAAGCAGTTCAGTAACTCATTGGTCAAAGAATGGCTTGATGAGGTTAGAGACGCGTTGTATGATGCAGAGGATCTCTTGGATGAAATAGACTATGAATGCTCCAAAAACCAGTCGGTAGCTGAATTCCAGTGCAGTGCTAGCAAGGTAAGCAGTTTTGAATCCAAGATGATAGAAGTCCTGGATGATCTAGAATCTCTCTCAAACCAAAAGGTTGTTCAAGATTTCAAAATTTCTAGTGGTGTTGGATATGGGTTGGGTAATAAAGTGTCAAAGAAAAACAATGAATCTTCATCATTGGTGGCTGAAGAGGTTATTTATGGCAGAGATGAGGAGAAAGAAATGATCCTTAATTGGCTCACATCTGAGAGTAACAATCATAACCAACTGTCTATACTTTCTATTGTGGGTATGGGCGGGATGGGTAAGACCACACTTGCTCAACATGTATACAATGACCCAAAGATGAAGGAAGCTAAATTTGACCTTAAAGCTTGGGTTTGTGTTTCAGATGAGTTTCATGTTTTGACAGTATCAAAAGCAATTATTGGGGCTTTCACTAAATCAAAAGATGATAGTGAAGACCTAGAAATGGCTCATGGAAAACTGAAAGAAAAATTGACTGGAGTGAAGTTTTTTCTGGTTCTGGATGATGTTTGGAATGAAGATCGAAACCAGTGGAAAACTTTGCGAACTCCTCTTAAATATGGGGCTAAGGGAAGTAAAATTCTTGTCACAACACGGAGTAACAAAGTTGCTTCTACTTTGGAGTCAAACAACATACACCGACTAAAGCAATTACAAGAAGATCACAGTTGGCAAGTTTTTGTAAACCATGCATTGCAAGATGATAACTCTAAGTTGAATTTTGAATTGAAGGAGATTGGCATGAACATAGTTGAAAAGTGCCAAGGACTGCCTCTCGCCCTTGAAACGGTAGGATCTCTTTTACAGTCAAAGTCATCTGTTTCAGAGTGGGAAGGTGTATTGGAAAGCAACATATGGGACTTACCGATAGAAGATAGTAACATTCTCCCTGCTTTGTTGTTGAGCTATTATCATCTCCCTTCTCATCTCAAGAGATGTTTCGCTTATTGTGCGTTATTCCCCAAAAACCATGAGTTTGACAAAGAGAGCTTAATTCTCTTATGGATGGCTGAAAATTATCTACACTGCTCTCAGCCGAGTGAACAATACTTCAATGATCTATTATCAAGGTCATTCTTTCAGCAGTCAATTAGGTATAACAAAACATACTTTGTCATGCACGACCTTGTAAATGATTTAGCAAAGTATGTTTCTAGTGAAATATGTTTCAGGTTGGGAGTTGATAAAGCAGAAGGAGAAAGAGTACCAAAAACAACTCGTCACTTTTCAATTGTAAGGAATCTTGCTAAATGTGATGAGTATAGGAGTTTATGTGATGCTAAAGGACTGCGAACATTTATAAATTTTGTCAACTATGGGATGTCAATATATGAGTTGATCTCCAATTTTAAGTTCTTACGGGTCTTATCATTGCCTTCATGTCATAATGTAGAAGAGTTGCTTGACACTATATGTGATCTTATACATCTCCGTTCATTAGACCTTTCAAGCACAAACATAGAGAGACTTCCGGACTCATTATGTTCACTTTATAACTTACAAGTGTTGAAGCTCAACCATTGTACCTCTTTGAAGGAGCTGCCCTCAACTTTGCATGAGCTCACCAAGTTGCGCCGCCTTGAACTTGGTGGAACTACTTTAACAAAAGTTCCAATGCTTTTAGGAAAATTGAAGAATCTTCAAGTATGGATGGGTGAGTTTAAGGTTGGAAAAAGTGGTAGTGAGTTTAGTATTCAACAACTAGGACAACTTGATCTTCATGGATATCTGTCACTTTCAAATCTCGAAAATATTGTGAACCCCTGTGATACGTTGGCAGCGGATTTGAAGAATAAAACACATCTTGTGGGGCTACGTTTAGAATGGGATTTGAAGCTGAACAATGAGGATCCAATAAAAGAAAGAGAAGTAATAGAGAATTTGAAACCTTCCAGACATTTGAAGCAGTTGTCAATCCGTTACTTTTGTGGCACACAATTTCCAGGTTGGTTGTCTGATAAATTTCTATTGAATATGGTGTCCTTAAATTTGTATAACTGTAAACATTGCCAATGGTTGCCTTCCCTTGGACTTTTGACATTTCTCAAGCAGTTGGAAATTGAAGGCCTTGATAAGATAGTGAGGATAGATGCTGATTTTTATGGGAATAGCTCTTCTGCATTTGCATCCTTGGAAATGTTGACCTTTCATGACATGAAAGAATGGGAAGAATGGCAATGCATGAAGGGTGCTTTTCCAAGACTTCAATGTCTTATTGTGTCGAAATGTCCCAAACTGAAAGGACACTTGCCAGAGCACCTTCCTTATTTAAAGAATCTAATTGTTGGGCACATGAATATTCCTATAAACCATTGCTACTATTTTCTTGTACAATTGAATATCAGTCAATGTTGTGACTCTCTAACGAACTTTCCTCTAGACTTATTCCCAAAACTCCGCGAGCTTGATTTAGGCAATTGTCGTAACTTACAGATAATATCACAAGGGCACCCTCATCATCATTTGAAGAGTCTGGAAATTAAAAAATGCTCTGAATTTGAATCATTTCCCAATGAAGGATTATTGACATCTGAGCTAGAGACATTTCATATTAAAGAACTGGAGAAATTGAAATCAATGCCTAAATGCATGTCTTCCCTGCTTCCATCTCTTAGTTATCTACATATAAAGGATTGTCCAGGAGTGGAGTTGTCTGAGGGATGTTTGCCATCAAATCTTAAAAAAATGTTTCTCTTAAATTGCTCCAAATTTGTTGCCTCACTAAAGAAGGGGGTTTGGGGAACCAACCCATCTCTAGAATCCTTGTATATTGAAGAAGGGGATGTGGAGTGTTTTCCGAGTAAAGGTTTGTTTCCACTTTCTCTTACTGAGCTAAGCATAAAAGATTGTCCAAATCTAAAGAAACTGGACTTCAGGGGTCTCTCTCACCTCTCCTCTCTTAAGAAATTGGTTATTCATAATTGTCCAATTCTCCAATGTTTGTCAGAGGAGAATCTGCCCGAATCCATTTCAGAACTCATGATTAGAGACTGTCCGTTGCTCAAACAGCGATGCAAGAAACAAGAAGGTGAAGATTGGGAAAAGATTGCTTACATTAAAACCGTATGGATTGATGACGAACAAGTGAACATTAAAGACAAAGCCCAAGTTGAAAATTAA 3447 0.3824 MPVLETLGGALFCAVLQMLFDKLDSHQVLDYFRGRKLDERLLKKLKRKLMDINAVVDDAEQKQFSNSLVKEWLDEVRDALYDAEDLLDEIDYECSKNQSVAEFQCSASKVSSFESKMIEVLDDLESLSNQKVVQDFKISSGVGYGLGNKVSKKNNESSSLVAEEVIYGRDEEKEMILNWLTSESNNHNQLSILSIVGMGGMGKTTLAQHVYNDPKMKEAKFDLKAWVCVSDEFHVLTVSKAIIGAFTKSKDDSEDLEMAHGKLKEKLTGVKFFLVLDDVWNEDRNQWKTLRTPLKYGAKGSKILVTTRSNKVASTLESNNIHRLKQLQEDHSWQVFVNHALQDDNSKLNFELKEIGMNIVEKCQGLPLALETVGSLLQSKSSVSEWEGVLESNIWDLPIEDSNILPALLLSYYHLPSHLKRCFAYCALFPKNHEFDKESLILLWMAENYLHCSQPSEQYFNDLLSRSFFQQSIRYNKTYFVMHDLVNDLAKYVSSEICFRLGVDKAEGERVPKTTRHFSIVRNLAKCDEYRSLCDAKGLRTFINFVNYGMSIYELISNFKFLRVLSLPSCHNVEELLDTICDLIHLRSLDLSSTNIERLPDSLCSLYNLQVLKLNHCTSLKELPSTLHELTKLRRLELGGTTLTKVPMLLGKLKNLQVWMGEFKVGKSGSEFSIQQLGQLDLHGYLSLSNLENIVNPCDTLAADLKNKTHLVGLRLEWDLKLNNEDPIKEREVIENLKPSRHLKQLSIRYFCGTQFPGWLSDKFLLNMVSLNLYNCKHCQWLPSLGLLTFLKQLEIEGLDKIVRIDADFYGNSSSAFASLEMLTFHDMKEWEEWQCMKGAFPRLQCLIVSKCPKLKGHLPEHLPYLKNLIVGHMNIPINHCYYFLVQLNISQCCDSLTNFPLDLFPKLRELDLGNCRNLQIISQGHPHHHLKSLEIKKCSEFESFPNEGLLTSELETFHIKELEKLKSMPKCMSSLLPSLSYLHIKDCPGVELSEGCLPSNLKKMFLLNCSKFVASLKKGVWGTNPSLESLYIEEGDVECFPSKGLFPLSLTELSIKDCPNLKKLDFRGLSHLSSLKKLVIHNCPILQCLSEENLPESISELMIRDCPLLKQRCKKQEGEDWEKIAYIKTVWIDDEQVNIKDKAQVEN* 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2004 1148 Gene3D - 146 322 IPR027417 -
Pvu11g2004 1148 PANTHER OS05G0414200 PROTEIN 27 945 - -
Pvu11g2004 1148 Gene3D Ribonuclease Inhibitor 877 1129 IPR032675 -
Pvu11g2004 1148 Gene3D Ribonuclease Inhibitor 532 876 IPR032675 -
Pvu11g2004 1148 Gene3D - 411 492 IPR036388 -
Pvu11g2004 1148 ProSiteProfiles Leucine-rich repeat profile. 585 606 IPR001611 GO:0005515
Pvu11g2004 1148 SUPERFAMILY L domain-like 883 1125 - -
Pvu11g2004 1148 PANTHER DISEASE RESISTANCE PROTEIN RP 27 945 IPR044974 GO:0006952
Pvu11g2004 1148 Pfam Leucine rich repeat 585 641 IPR001611 GO:0005515
Pvu11g2004 1148 Pfam Rx N-terminal domain 14 105 IPR041118 -
Pvu11g2004 1148 Gene3D - 16 129 - -
Pvu11g2004 1148 Pfam NB-ARC domain 170 391 IPR002182 GO:0043531
Pvu11g2004 1148 PRINTS Disease resistance protein signature 192 207 - -
Pvu11g2004 1148 PRINTS Disease resistance protein signature 266 280 - -
Pvu11g2004 1148 PRINTS Disease resistance protein signature 363 377 - -
Pvu11g2004 1148 PRINTS Disease resistance protein signature 903 919 - -
Pvu11g2004 1148 SUPERFAMILY L domain-like 481 870 - -
Pvu11g2004 1148 Gene3D - 326 410 IPR042197 -
Pvu11g2004 1148 Coils Coil 42 62 - -
Pvu11g2004 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 426 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2004 Pvu-Chr11 46916084 46919998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2004 193 387 WRKY Transcription Factor Family AT5G45050 26.794 1.81e-08 57.0