Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2002 ATGCCTGTCCTAGAAACTCTTGGTGGTCCTCTTTTTGGTGCTGTTCTCCAAGTCCTATTTGACAAGCTCGAATCTGATCAAATCCTGGACTACTTTAGTGGAAGAAAGCTCGATGAGAGGCTGCTGAAAAAGTTGAAGATGAAGCTGATGGACATCAAAGCTGTGATTGATGATGCAGAACAAAAGCAGTTCACTAATTCATTGGTCAGAGAATGGCTTGATGAGGTCAGAGATGCTTTGTATGATGCGGAGGATCTGTTGGAGCAAATACACTATGAATTCTCCAAAACTCAGTTGAAACCTGAATTCCAGATCAGTGCTAGCAAGGTAAGCAGTTTTCAATCCAAGATCATAGAACTCCTAGATGATCTAGATTATCTATTAAATCAAAAGATTGTTCAGGATTTCAAAATTTCTAGTGATGTTAGATCTGGATTGGGTAATAAAGTGTCTGAGAAAATAAATGAATCCTCATCTTTGGTGGTTGAAGAGGTTATTTATGGCAGAGGTGAGGACAAAGAAAACATCCTTAATTGGCTGACATCTGAAGATGAGAACTGTAGTCAACTGTCAATACTTTCTATTGTGGGTATGGGCGGGATGGGTAAGACCACACTTGCTCAACATGTATACAATGATCCAATGATAGAGACTAAATTTGCTATCAAAGCTTGGGTCTGCGTTTCTGATGAATTCAATGTTTTCAAGATAACCAGAGCAATTCTTGAGGCAATCCATAAGTCAACTGATGATAGCAGAAACTTAGAAATGGTTCAGGGACGATTGAAAGAAAAATTGAATGGAATGAAGTTTCTTATGATTCTGGATGATGTTTGGAACGAAGATCGAAATCAATGGAAATCATTGAAAACTCCTCTTAAGTATGGGGCTAAGGGAAGTAAAATTCTTGTCACAACACGCAGTAACAATATTGCTTCTACCTTGGAGTCAAACAATATACACCAACTAAAGCAATTACAGGAAGATCACAGTTGGCAAGTTTTTGCTAAACATGCAATGCAAGATGACAACTCTAACTTGAATTCTGAGTTGAAGGAGATTGGCATGAAGATACTTAAAAAGTGCCAAGGACTGCCTTTGGCCCTTGAAACAGTAGGATGTCTTTTACAGTCAAAGTCATCTGTTGCAGAGTGGGAAGGTGTACTGAGAAGCAACATTTGGGACTTATCGATAGAAAATAGTAAAATCCTTCCCGCTTCGTTGTTGAGTTATCACCATCTTCCTTCTCATCTCAAGAGATGTTTCTCTTATTGTGCGTTATTCCCCAAAGGCCATATGTTTGACAAGGAGAGCTTGATTCTCTCATGGATGGCTGAAAATTTTCTACAATGTTCTCAGCAGAATAAGTCTCAAGAAGAAGTAGGTCAACAATACTTCATTGATCTGTTATCCAGGTCATTCTTTCAACAGACAACTGTACAAGCCAGGATGCACAACAAAACATGTTTTTTGATGCACGACCTTCTCAATGATTTAGCAAAATATGTTTCTGGTGAAATGTGCTACAGGTTGGGTATTGATAGGCGAGGAAGCGTACCAAAGAGAACCCGTCACTTTTCAACTATAAAGAATCCTATTGAATGTGATGAGTATAGGAGCTTATGTGATGCTAAAAGGCTACGAACATTTATGTCCATATCTATGAATTTTGGGATGTCAATACAAATACAAGAGTTGATCTCCAACTTTAAATTTTTACGGCTCTTATCTTTGTCTAGTTGTCTTAACATAAAAGAGGTGCCTGATACTATAACCGATCTTATACATCTCCGTTCGTTAGACCTTTCATTAACAGGCATAACGAGACTTCCCGACTCAATATGTTCACTCTATAACTTGCTAGTGTTGAAGCTGAACTATTGTAGATGTTTGAAGGAGTTGCCCTCGACTTTGCATGAGCTCACCAAGTTGCACCGCCTTGAACTTATAGGAACTTTTTTAAGAAAGGCCTCAGTGCTTTTAGGAAAATTGAAGAATCTTCAAGTATGGACGGGTGGGTTTGAGGTTGGAAAAAGTAGTAGTGAGTTCAGTATTCAACAACTAGGACAACTTGATCTTCATGGAAGTCTGTCACTTTCAAATCTTGAAAATATTGTGAATTCCTGTGATACGTTGGTAGCGGATTTGAAGAATAAAATACATCTTGTGGGGCTATGTTTAGAATGGGGTTTGAAGCGGAACAATGAGGAATCAATAAAAGAAAGAGAAGTACTAGAAAATCTGCAACCTTCCAGAAATTTGGAGCAATTCTATTCTGCATTTACATCCTTGGAAAAGTTAAGCTTTATTGATATGAAGGAATGGGAAGAATGGGAATGCATGACGGGTGCTTTTCCAAATCTGCAACGTCTTAGTGTGTCGGATTGTCCCAAACTGAAACGGCACTTGCCAGAGCACCTTCCTCATTTAACTAATCTACTTATTAAGGGATGCGAACAACTTGTGGTTTCAACTCCCAGGGCAGTCGAAATTGAAGGTGTGAAGATGGAGACACCTTCATTTGACATGACAGGGCACCTCTTCTCTCATACTCCTCTTCATTCCTTGGGTATTTATTCTTGTTTGAGGGTGAATATTCCTATAAACCATTGCTACCATTTCCTTGTAGAATTGAATATAAGTGAATGTTGTGACTCTTTGACAAACTTCCCTCTAGACTTATTCCCAAAACTTTGTAAACTGTGTTTAGACGAATGTCATAACCTACAGATGATATCACAGGAGCACCCTCATCGTCATTTGAAAAGGCTGAGCATTCTAAAGTGTTGTGAATTCGAATCATTTCCCAATGAAAGATTACTTGCACCGCAACTAGAAATCTTTTTTATTGTAGAATTGGAGAAATTGAAATCAATGCCTAAAAGTATGTCTATCCTCCTTCCATCTCTTAATTCTCTGTATATATTTGATTGTCCGGGACTAGAGTGGTCTGACAGATGTTTGCCATCAAATCTAAAAGAAATGCATCTCTTGAATTGCTCCAAACTTGTTGCCTCACTAAAGAAGGGGATTTGGGGAACGAACCCTTCCATAGAATCCTTGTGTATTGAAAAGGAGAATGTGGAGTGTTTTCCGGGGGAAGGTTTGCTCCCACCCTGTCTTACTAAGCTAATGATAAATGATTTTCCAAATCTAAAGAAACTGGACTACAGGTGTCTCTGTCACCTCTCCTCTCTTCAGAAAATGACTCTTCGAAATTGTCCTGTACTCCAAAGCTTGCCAGAGGAGGGTCTGCCCGAATCCATTTCAACTCTCCAAATTGAACTGTGCCAATTGCTCAAACAGCGATACAAGAAAAATGGAGGCAAAGACTGGGAAAAAATTGCTCATATTAAAACTATACAGGTTGATGGTGTGTACCAGTAA 3387 0.3885 MPVLETLGGPLFGAVLQVLFDKLESDQILDYFSGRKLDERLLKKLKMKLMDIKAVIDDAEQKQFTNSLVREWLDEVRDALYDAEDLLEQIHYEFSKTQLKPEFQISASKVSSFQSKIIELLDDLDYLLNQKIVQDFKISSDVRSGLGNKVSEKINESSSLVVEEVIYGRGEDKENILNWLTSEDENCSQLSILSIVGMGGMGKTTLAQHVYNDPMIETKFAIKAWVCVSDEFNVFKITRAILEAIHKSTDDSRNLEMVQGRLKEKLNGMKFLMILDDVWNEDRNQWKSLKTPLKYGAKGSKILVTTRSNNIASTLESNNIHQLKQLQEDHSWQVFAKHAMQDDNSNLNSELKEIGMKILKKCQGLPLALETVGCLLQSKSSVAEWEGVLRSNIWDLSIENSKILPASLLSYHHLPSHLKRCFSYCALFPKGHMFDKESLILSWMAENFLQCSQQNKSQEEVGQQYFIDLLSRSFFQQTTVQARMHNKTCFLMHDLLNDLAKYVSGEMCYRLGIDRRGSVPKRTRHFSTIKNPIECDEYRSLCDAKRLRTFMSISMNFGMSIQIQELISNFKFLRLLSLSSCLNIKEVPDTITDLIHLRSLDLSLTGITRLPDSICSLYNLLVLKLNYCRCLKELPSTLHELTKLHRLELIGTFLRKASVLLGKLKNLQVWTGGFEVGKSSSEFSIQQLGQLDLHGSLSLSNLENIVNSCDTLVADLKNKIHLVGLCLEWGLKRNNEESIKEREVLENLQPSRNLEQFYSAFTSLEKLSFIDMKEWEEWECMTGAFPNLQRLSVSDCPKLKRHLPEHLPHLTNLLIKGCEQLVVSTPRAVEIEGVKMETPSFDMTGHLFSHTPLHSLGIYSCLRVNIPINHCYHFLVELNISECCDSLTNFPLDLFPKLCKLCLDECHNLQMISQEHPHRHLKRLSILKCCEFESFPNERLLAPQLEIFFIVELEKLKSMPKSMSILLPSLNSLYIFDCPGLEWSDRCLPSNLKEMHLLNCSKLVASLKKGIWGTNPSIESLCIEKENVECFPGEGLLPPCLTKLMINDFPNLKKLDYRCLCHLSSLQKMTLRNCPVLQSLPEEGLPESISTLQIELCQLLKQRYKKNGGKDWEKIAHIKTIQVDGVYQ* 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2002 1128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 425 IPR027417 -
Pvu11g2002 1128 Gene3D - 17 127 - -
Pvu11g2002 1128 Gene3D - 325 410 IPR042197 -
Pvu11g2002 1128 Gene3D - 411 502 IPR036388 -
Pvu11g2002 1128 PANTHER OS05G0414200 PROTEIN 757 935 - -
Pvu11g2002 1128 PANTHER OS05G0414200 PROTEIN 22 757 - -
Pvu11g2002 1128 Gene3D - 144 323 IPR027417 -
Pvu11g2002 1128 SUPERFAMILY L domain-like 851 1115 - -
Pvu11g2002 1128 SUPERFAMILY L domain-like 492 820 - -
Pvu11g2002 1128 PANTHER DISEASE RESISTANCE PROTEIN RP 757 935 IPR044974 GO:0006952
Pvu11g2002 1128 PANTHER DISEASE RESISTANCE PROTEIN RP 22 757 IPR044974 GO:0006952
Pvu11g2002 1128 Pfam Rx N-terminal domain 13 104 IPR041118 -
Pvu11g2002 1128 Coils Coil 42 62 - -
Pvu11g2002 1128 Gene3D Ribonuclease Inhibitor 536 861 IPR032675 -
Pvu11g2002 1128 Pfam NB-ARC domain 172 390 IPR002182 GO:0043531
Pvu11g2002 1128 Gene3D Ribonuclease Inhibitor 919 1125 IPR032675 -
Pvu11g2002 1128 PRINTS Disease resistance protein signature 192 207 - -
Pvu11g2002 1128 PRINTS Disease resistance protein signature 265 279 - -
Pvu11g2002 1128 PRINTS Disease resistance protein signature 362 376 - -
Pvu11g2002 1128 PRINTS Disease resistance protein signature 568 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2002 Pvu-Chr11 46891762 46895553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2002 539 669 Receptor kinase-like Gene Family AT4G13920 34.307 3.39e-08 55.8