Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2000 ATGCCAGTCCTTGAAACACTTGGTGGTGCTCTTTTTGGTGCTGTTCTCCAGGTCCTATTTGACAAGCTCCATTCTCATCAAGTTCTCCACTACTTTCGTGTGAGAAAGCTCGATGGGAGGCTGCTGAAAAAGTTGAAGAGGAAGCTGATGGACATCAATGCTGTGATTGATGATGCAGAACAAAAGCAGTTCACTAATTCATTGGTCAAACAATGGCTTGATGAGGTTAGAGATGCCTTGTATGATGCGGAGGATCTGTTGGAGCAAATAGACTATGAATTCTCCAAAAGTGAGCTGAAAGCTGAATTCCAGGGCAGTGCTAGCAAGGTACGCAGTTTTGAATCCGAGATGTTAGAAGTCATAGATGATCTAGAATCTCTCTTAAACCAAAAGCTTGTTCAAGATTTCAAAATTTCTAGTGGTGTTGGATCTGGTTCGGGAAACAAAGTAGAGGACAAAGAAATGATCTTTAATTGGCTGAAATCAGACAATAGCAATCATAACCAGCTATCAATACTTTCTATTGTGGGTATGGGTGGGATGGGTAAGACCACACTTGCTCAACATGTATACAATGACCCAATGATAAAGGCTAAATTTGCTATCAAAGCCTGGGTCTGTGTTTCTGATGAATTCGATGCAATCCATAAGTCAACTGATGATAGTAGAAATCTAGAAATGATTCAGGGACGATTGAAAGAAAAATTGAATGGAATGAAGTTTCTTCTCGTTCTTGATGATGTTTGGAACGAAGATCGAAACCAATGGAAATCATTGCAAACTCCTCTTAAATATGGGGCTAAGGGTAGTAAAATTCTTGTGACAACACGTAGTAACAAAGTTGCTTCTTCCTTGGAGTCAAACAATTTACACGAACTAAAACAACTACAAGAAGATCACAGCTGGCAAGTTTTTGCTAAACATGCAGTGCAAGATGATAGCTCTAAGTTGAGTTCTGATTTGAAGGAGATTGGCATTAAGATAGTTGAAAAGTGCAAAGGACTTCCCCTGGCCCTTGAAACTGTAGGAGGTCTTTTACTGTCAAAGTCATCTGTTGCAGAATGGAAAGGTGTTCTGAGAAGCAACATATGGGACTTACCAATAGAAAATAGTAAAATCCTCCCTGCTTTGTTGTTGAGCTATTACCATCTTCCTTCCCATCTCAAGAGATGTTTTGCTTATTGTGCGCTATTCCCCAAAGGCCATAAGTTTGAGAAGAAGAGCTTAATTCTCTCATGGATGGGTCAAAATTTCCTACAATGTTCTCACCAGAGTGCGTCTTCAGAAGAAATAGGTGAACAGTACTTCAATGACCTAAAATCAAGGTCATTCTTTCAGCAGTCAATTAGGTACAAGAAAACATATTTTGTGATGCATGACCTTCTGAATGATTTAGCAAAATATGTTTCTGGTGAAATCTGTTACAGGTTGGGTATTGACAGACCAGGAAGCGTATCAAACATAACTCGTCACTTTTCAACTGTAAAGAATACAATTGAATGTGATGAGTGTACGAGTTTATGTGATGCTAAAAGGCTACGAACATTTATAACTTTTGACTATGGGATTGCAACATATAAGGATTGTGAGATGTCAATACAAGACTTGATATCTAACTTTAAGTTCTTACGGGTCTTATCCTTGCATTTGTGTTATAACATAAAAGAGGTGCCTGAGAGTATAGGCAATCTTATACATCTTCGTTCATTAGACCTTTCAAGTACCGGCATAAAGAGACTTCCCGACTCAACCTATTCACTCTATAACTTGCAAGTGTTGAAGCTGAACAAATGTATGCTTTTGAAGGAGCTGCCCTCCACTTTGCATGAGCTCACCAAGTTGTGTCACCTTGAACTTATGGGAACTACTTTAACAAAGGCTCCAATTCTTTTAGGAAAGTTGAAGAATCTTCAAGTATGGATGGATAGGTTTGAGGTTGGAAAAAGTAGTAGTGACTTGAGTATTCACCAACTAGGAGAACTTGATGTTCACGGAGGGCTGTCAATTACAAATCTTGAAAATATTGTGAATCTCTATGATGCATTGGCAGCAAATTTGAAGAATAAAACACATCTTGTGAGCTTATATTTAGAATGGGATTTGAAGCGGAACAATGAGGATTCAGTAAAAGAAAGAGACGTACTAGAGAATCTGCAACCTTCCAAACATTTGGAGAAGTTGTCAATCACGGGCTATTGTGGCACACAATTTCCAGGTTGGTTATCTGATAAATTTATATTGAATGTGGTGTCCTTAAGATTGTACAAATGTAAATATTGCCAATGGTTGCCTTCCCTTGGACTTTTGACATTTCTGAAGCACTTGTCAATGCAAGGCCTTGATGAGATAGTGAGGATAGATGCTGATTTTTACGGGAATAGCTCTTCTGCTTTTGCATCCTTGGAAACGTTGAGCTTTGTTGATATGAAGGAATGGGAAGAATGGCAATGCATGACGGGTGCTTTTCCAAGTCTTCAAAGTCTTCAATTGTCGCAATGTCCCAAACTAAAAGGGCAATTGCCAAAGAAGCTTGCTCATTTAAAGGATCTAAGTATTTATGATTGCAACCAACTTGGGGCTTTGATTCCCAGGGCGGTAGAAATTGAAGGTGTGAAGATGGAGACATCTTCATTTGATATGATAGGGAACCTCCTATGTCATACCCCTCTTGAATCGTTGAGTATTATGTGTTGTCCGGACATGAATATTCCCATAAACCATTGCTACGATTTCCTTGTAAAATTGTTTATCCATGAATGTTGTGAGTCTCTCACGAACTTCCCTCTAGACTTATTTCCAAAACTTTGCTACCTTTCTTTATACGGATGCCATAACCTACAGATGATATCACAGGAGCACCCTCATTGTCATTTGAGCAGTCTGGAAATTACAAAATGCTCTGAATTTGATACATTTCCTATTGAAGGATTATTTGCACCTAAGCTAAAGAGAGTTAATATTATAGGAATGGAGAAATTGAAATTAATGCCTAAACGTACGTCTGTTCTCCCATCTCTGAATCGTCTGTATATAATGAATTGTCCAAGACTGGAGTTTTCTGAGGGATGTTTGCCATCAAATCTAAAAGAAATGTGTCTCTTGAATTGCTCCAAACTTGTTGCCTCACTAAAGGGGGCTTGGGGAAACAACCCTTCCTTAGAATATTTGTTTATTAAAAAAGAGGATGTGGAGTGTTTTCCCGTTGAAGGTTTGCTCCCACCCTCTCTTACTACTCTAAACGTAAATGATTGTCCAAATCTAAAGAAACTAAACTACAGGGGTCTCTGTCACCTCTCCTCTCTTCAGACAATGATTCTTGAAGATTGTCCTGTACTCCAATGCTTGCCAGAGGAGGGTCTACCCGAATCCATTTCAAAACTAGATATTAAAGTCTGTCCATTGCTCAAACAGCGGTGCAAGAAAGGTGGTGAAGACTGGGAAAAGATTGCTCACATTAAAACTATATGGGTTGATTAT 3477 0.3888 MPVLETLGGALFGAVLQVLFDKLHSHQVLHYFRVRKLDGRLLKKLKRKLMDINAVIDDAEQKQFTNSLVKQWLDEVRDALYDAEDLLEQIDYEFSKSELKAEFQGSASKVRSFESEMLEVIDDLESLLNQKLVQDFKISSGVGSGSGNKVEDKEMIFNWLKSDNSNHNQLSILSIVGMGGMGKTTLAQHVYNDPMIKAKFAIKAWVCVSDEFDAIHKSTDDSRNLEMIQGRLKEKLNGMKFLLVLDDVWNEDRNQWKSLQTPLKYGAKGSKILVTTRSNKVASSLESNNLHELKQLQEDHSWQVFAKHAVQDDSSKLSSDLKEIGIKIVEKCKGLPLALETVGGLLLSKSSVAEWKGVLRSNIWDLPIENSKILPALLLSYYHLPSHLKRCFAYCALFPKGHKFEKKSLILSWMGQNFLQCSHQSASSEEIGEQYFNDLKSRSFFQQSIRYKKTYFVMHDLLNDLAKYVSGEICYRLGIDRPGSVSNITRHFSTVKNTIECDECTSLCDAKRLRTFITFDYGIATYKDCEMSIQDLISNFKFLRVLSLHLCYNIKEVPESIGNLIHLRSLDLSSTGIKRLPDSTYSLYNLQVLKLNKCMLLKELPSTLHELTKLCHLELMGTTLTKAPILLGKLKNLQVWMDRFEVGKSSSDLSIHQLGELDVHGGLSITNLENIVNLYDALAANLKNKTHLVSLYLEWDLKRNNEDSVKERDVLENLQPSKHLEKLSITGYCGTQFPGWLSDKFILNVVSLRLYKCKYCQWLPSLGLLTFLKHLSMQGLDEIVRIDADFYGNSSSAFASLETLSFVDMKEWEEWQCMTGAFPSLQSLQLSQCPKLKGQLPKKLAHLKDLSIYDCNQLGALIPRAVEIEGVKMETSSFDMIGNLLCHTPLESLSIMCCPDMNIPINHCYDFLVKLFIHECCESLTNFPLDLFPKLCYLSLYGCHNLQMISQEHPHCHLSSLEITKCSEFDTFPIEGLFAPKLKRVNIIGMEKLKLMPKRTSVLPSLNRLYIMNCPRLEFSEGCLPSNLKEMCLLNCSKLVASLKGAWGNNPSLEYLFIKKEDVECFPVEGLLPPSLTTLNVNDCPNLKKLNYRGLCHLSSLQTMILEDCPVLQCLPEEGLPESISKLDIKVCPLLKQRCKKGGEDWEKIAHIKTIWVDY 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2000 1159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 395 IPR027417 -
Pvu11g2000 1159 SUPERFAMILY L domain-like 884 1150 - -
Pvu11g2000 1159 Coils Coil 669 689 - -
Pvu11g2000 1159 Coils Coil 110 130 - -
Pvu11g2000 1159 Pfam NB-ARC domain 153 359 IPR002182 GO:0043531
Pvu11g2000 1159 SUPERFAMILY L domain-like 457 857 - -
Pvu11g2000 1159 PANTHER DISEASE RESISTANCE PROTEIN RP 877 1114 IPR044974 GO:0006952
Pvu11g2000 1159 PANTHER DISEASE RESISTANCE PROTEIN RP 27 901 IPR044974 GO:0006952
Pvu11g2000 1159 PANTHER OS05G0414200 PROTEIN 27 901 - -
Pvu11g2000 1159 PANTHER OS05G0414200 PROTEIN 877 1114 - -
Pvu11g2000 1159 Gene3D Ribonuclease Inhibitor 501 641 IPR032675 -
Pvu11g2000 1159 PRINTS Disease resistance protein signature 172 187 - -
Pvu11g2000 1159 PRINTS Disease resistance protein signature 235 249 - -
Pvu11g2000 1159 PRINTS Disease resistance protein signature 332 346 - -
Pvu11g2000 1159 PRINTS Disease resistance protein signature 820 836 - -
Pvu11g2000 1159 Pfam Rx N-terminal domain 13 101 IPR041118 -
Pvu11g2000 1159 Gene3D - 380 468 IPR036388 -
Pvu11g2000 1159 Gene3D - 15 128 - -
Pvu11g2000 1159 Gene3D Ribonuclease Inhibitor 1026 1141 IPR032675 -
Pvu11g2000 1159 Gene3D - 295 379 IPR042197 -
Pvu11g2000 1159 Coils Coil 42 62 - -
Pvu11g2000 1159 Gene3D - 142 291 IPR027417 -
Pvu11g2000 1159 Gene3D Ribonuclease Inhibitor 844 1025 IPR032675 -
Pvu11g2000 1159 Gene3D Ribonuclease Inhibitor 648 843 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2000 Pvu-Chr11 46884221 46887786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2000 495 665 Receptor kinase-like Gene Family AT4G13920 28.571 2.51e-11 66.2