Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1997 ATGTCTGAAGAATCACTGAGTATTGTGGTGATCCACTATGCATTAAGAGACTTCAACACAAGTGCAATAAAAGTGGTCATGCAGGGATTTTCACTTGGTCATGGAGACAAGCTTACACTTCTTGTAATTCTTCGCCAAGCTTATAGTCCAACTAGGCTTCCCTTCATTGCACCTGCCAGATTGCGTGGATTATTTGAGAGTGATCACAAAATTGTTGAGGAAGAAATTGCTAAGAAGAAAGAAGAGCTTCTTAATAATGCAAGCATAAGGGAAATTTCTGAGCAGTGTGAAGCAGACAGGATCCAATTCCAGATTGAAGTTCTTCAGGGCAAATTACCAGAGGTTGCTGTAAATGCTGCCATCCGTTTGGAGGCAACATCAGTTATACTTGATAGACAGATGAAGAAATATAAGAAGGATTTGAAGCAGAGTCTCTCTTGTTCTTTGTTAATAATGAAACGTGACAACTCTATGCAACACTTGAGAGGGCCAAAGAACACACATCAGTGTGATAGAAGCAATGGAAATGCAAGATGTGTTAGATCAGGTCCTAAATCTAAATCTCCTCCAAGAATACGGCAAGTGACAAATTCATGCTCCAATACCAGCTCTTCATTTCCTACTCTGGAGAAGTTTTGGTGCCCTGAAAATAGAGAAGACATGGCAAGAGGGTATTGCCTACTACCCTTTACTGATACTCAAAAGACTAATCATACTGAAGTGTATCACATGGAAGCACCAGCAGAACATAACAACAACTATGAAGCTTATCAAATAGTTGAACAATTCAAAAATTCTGTTTGCTCAGTATGCAAAAACAGAAGACCAAAATTTGAAGTGATGAAAGAATTCACATACGCGGAGCTGCATGAAGCTACACAAGGTTTTTCACCAAAAAACTATTTGTCAGAAGGTGGATTTGGTTCTGTCTACAAAGGAATGCTGCAAGGAGGCCTAAGGATTGCTGTTAAGCAACATAAGTGTGCAAGCCTCCAAGGAGAGAAGGAATTCAAATCTGAGGTCAATGCACTCAGCAGAGCTATACATGAGAATGTGGTCATGCTGCGTGGATTTTGTTCAGAAGGAAATAACAGGCTTCTTGTGTATGAATTTGTTTGCAATGGCTCTCTTGACCAACATTTATCACAACACTCACGTAAGCCTCTTACTTGGGGAGAAAGGATCAAAGTAGCTATTGGAGCTGCAAAAGGCTTATTGTTCTTGCATCAGAACAATATAATACACCGAGATATGAGGCCTAGCAACATCCTTGTTACACATGATTATGAAGCAATGCTTGGAGATTTTGGTCTGGCTAGAACAGAACAAATGGACTCCTTATACTCCACAGATGTTGTTGGAACTATAGGGTATTTGGCACCAGAATATGCAGAATCAGGAAAAATGTCAACCAAGACAGATGTGTATTCTTTCGGTGTGGTTCTTCTTCAGCTAATAACTGGAATGAGGACTGTAGACAAACGTCTTGGCGAAAAAAGTCTTGTGGGATGGGCTAGGCCACTACTTAAAGAAAGAAACTATCCAGATCTAATTGATGAAAGGATGATGGATAATCATGATTGCCATCAGCTTTTCTGGATGATTCGTCTAGCAGAAAAATGCCTCAGCAGGGATTCTCAGAGGCGATTATCAATGGATACAGTGGTCATTGCCTTAACTCATATACTGGAAGGCAACACATGCAGTGTTGTACTAAGAGACTGCTCTCCAGCACAGTCAGATTCATCCTATGACATGTCAGACTTGCTTATCTCAGATACCTCTCAGGAGATAGAACGTGAACATGCAAGCATCTATGCAGCATATGCTCCTATTTGCTTAAGACTTCCACCATCTCCTCCACTAGGAAGCACTTCCTCAAGCACATCAAGCATGTTCACAGGGCGGAGTGAATCTCCTTTAGATGATTTGTCCAATAATGAGAATAAGGGTAAAAGGGCAAATGAACAAGGTGGGATACTCTAA 1986 0.4068 MSEESLSIVVIHYALRDFNTSAIKVVMQGFSLGHGDKLTLLVILRQAYSPTRLPFIAPARLRGLFESDHKIVEEEIAKKKEELLNNASIREISEQCEADRIQFQIEVLQGKLPEVAVNAAIRLEATSVILDRQMKKYKKDLKQSLSCSLLIMKRDNSMQHLRGPKNTHQCDRSNGNARCVRSGPKSKSPPRIRQVTNSCSNTSSSFPTLEKFWCPENREDMARGYCLLPFTDTQKTNHTEVYHMEAPAEHNNNYEAYQIVEQFKNSVCSVCKNRRPKFEVMKEFTYAELHEATQGFSPKNYLSEGGFGSVYKGMLQGGLRIAVKQHKCASLQGEKEFKSEVNALSRAIHENVVMLRGFCSEGNNRLLVYEFVCNGSLDQHLSQHSRKPLTWGERIKVAIGAAKGLLFLHQNNIIHRDMRPSNILVTHDYEAMLGDFGLARTEQMDSLYSTDVVGTIGYLAPEYAESGKMSTKTDVYSFGVVLLQLITGMRTVDKRLGEKSLVGWARPLLKERNYPDLIDERMMDNHDCHQLFWMIRLAEKCLSRDSQRRLSMDTVVIALTHILEGNTCSVVLRDCSPAQSDSSYDMSDLLISDTSQEIEREHASIYAAYAPICLRLPPSPPLGSTSSSTSSMFTGRSESPLDDLSNNENKGKRANEQGGIL* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1997 661 Pfam Protein tyrosine and serine/threonine kinase 300 556 IPR001245 GO:0004672|GO:0006468
Pvu11g1997 661 PANTHER TYROSINE KINASE FAMILY PROTEIN 7 631 - -
Pvu11g1997 661 ProSitePatterns Tyrosine protein kinases specific active-site signature. 413 425 IPR008266 GO:0004672|GO:0006468
Pvu11g1997 661 Gene3D Phosphorylase Kinase; domain 1 257 371 - -
Pvu11g1997 661 Gene3D Transferase(Phosphotransferase) domain 1 372 575 - -
Pvu11g1997 661 SUPERFAMILY Protein kinase-like (PK-like) 281 569 IPR011009 -
Pvu11g1997 661 MobiDBLite consensus disorder prediction 620 642 - -
Pvu11g1997 661 MobiDBLite consensus disorder prediction 620 661 - -
Pvu11g1997 661 ProSiteProfiles Protein kinase domain profile. 296 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1997 661 PANTHER OS01G0253100 PROTEIN 7 631 IPR045271 GO:0004714|GO:0006468
Pvu11g1997 661 MobiDBLite consensus disorder prediction 161 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1997 Pvu-Chr11 46862516 46868576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1997 284 580 Trihelix Transcription Factor Family AT5G38560 45.955 1.48e-81 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pvu11g1997 PK_Tyr_Ser-Thr 9.7e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0140 5 1135418 1137664 Pvu11g1997 11 46862516 46868576 PCT