Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1996 ATGCCAATGATAGAAACACTTAGTGGTGCTCTTTTCGGTGCTGTTCTTCAGGTGCTGTTTGACAGGCTTGGTTCTCGTCAAGTTTTTGACTACTTTCGTGGAAAAAAGCTCGATGTGAAGTTGCTGAAGAAGTTGAAGAGGAAGCTGGTATCCGTTAAGGCTGTGGTTGATGATGCAGAACTGAAGCAGTTCAGAGATCCGTATGTGAAGGCATGGCTTGATGAGGTCAGAGATGTGTTGCTTGATACAGAGGATCTGATGGAGGAAATAGAGTATGAATTCTCCAGATCTGAGTTGGAAGTTCAATCCCAGAGCAGTTCTAGCAAGGTATGCAATTTTGAATCCAAGATTGTAGAAGTCCTTGATGACCTTGAATCTCTTCTAAGCCAAAAAGATTATCTAGGTTTGAAAAATGCTGGCGGGGTAGGGATTGGGTTAGGGTTGAGTAGTAATGTGTCACAGAAATTGCCATCAACATCTTTAGTGGATGAAAATGTTATTTATGGAAGAGATGATGAAAAAGAAATGATCCTCAAATGGATGACTTCTGACACTGAAGAGCATAGCCAACTATCAATACTTTCTATTGTGGGTATGGGTGGGATGGGTAAGACCACACTTGCTCAACATGTGTACAATGACCCAATGATAGAGGGTAAATTTGCTATCAAAGGTTGGGTTTGTGTTTCGGATGAATTTGATGTTTTTATGGTAACAAAAGCAATTGTTGGGGCAATCACTAAATCAAAAGATGATAGTGTAGACCTAGAAATGGTTCAGGGACGATTGAAAGAAAAGTTAACGGGAAGGAAGTTTCTCCTCGTTCTTGATGATGTTCGGAACGAACACCGAGACCAGTGGAAATCATTGCAAACTCCTCTTAAATATGGGGCTAAGGGAAGTAAAATTATTATCACAACACGTAGTAACAAAGTTGCTTCTATCATGGAGTCAAACAAGATTCGCCAACTAAAGCAACTACAAGAAGATCACAACTGGCAAGTTTTTGCTAAACATGCATTCCAAAATGATAACTCTAAGCCTAATTCCGAGTTGAAGAAGATTGGCACGCAGATAGTTGAAAAGTGCCAAGGACGGCCTCTGGCCCTTGAAATGGTAGGATCTCTTTTACAGTCAAAGTCATCTGTTTCAGAGTGGGAAAGTGTACTGAGAAGCAACATATGGAACTTACGAATTGAAGATGGTAAAATTCTCCCCGCTTTGTTGTTGAGCTATTACCATCTTCCTTCTCATCTCAAGACATGTTTCGCTTATTGTGCGTTATTCCCCAAAGACCATGAGTTTGAGAAGGAGAGCTTAATTCTCTCATGGATGGCTCAAAATTTCCTACAATGTTCTCAGCAGAGTGAGCCTCTAGAAGAAATAGGTGAACAGTACTTCAATGATCTATTATCAAGGTCATTCTTTTATCAGTCAAATTCGTTGGATGGAAGATATTTTGTGATGCACGACCTTCTGAATGATTTAGCAAAATATGTTTCTGGTGATATCTGCTACAGGTTGGGTGTTGATAGACCAGGAAGCGTACCGAAGACAACCCGTCACTTTTCAATTGTAAACATGGATCCTATTGAATGTGATGAGTATAGGAGTTTATGTGATGCTAAAAGGCTACGAACATTTCTGTCTACATCTACGAATTGTGAGATGTCAATTCAAGAGTTGATCTCGAACTTTAAGTTCTTACGACTCCTATCTCTGTCTTATTGTAGTAACATAAAAGAGGTGCCTGACACTATAACTGATCTCATACATCTGCGTTCATTAGACCTTTCTGGTACCTCTATAGAGAGACTTCCCGACTCAATGTGTTCACCCTGTAACTTGCAAGTGTTGAAGCTGAACGACTGTGACTTATTGAAGGAGCTGCCCTCGACTTTGCATGAGCTCACTAAGTTGCGCCGCATTGAACTTGACGGAACTACTTTAAGAAAGGTTCCAATGCTTTTAGGAAAGTTGAAGAATCTTCAAGTATGGATGGGTAAGTTTGAGGTTGGAAAAAGTAGTAGTGAGTTCAGTATTCAACAACTAGGACAACTTGATCTTCACGGAGAACTGTCAATTAGAAATCTTGAAAATATTGTGGATCCCTGTGATGCATTGGCAGCAGATTTGAAGAATAAAACACATGTTGTGAAGCTACGTTTAATATGGAATTTCGAGCGGAACAATGAGGATCCAATAAAAGAAAGAGAAGTACTTGAGAATCTGCAACCTTCTAAACATTTGAAGCATTTGTCAATCTTTCACTATTGGGGTCCACAATTTCCAAGCTGGTTATCTGATACATTTGTTTTGAATGTGGTGTCCCTAAGTTTGTATAAATGTAAATATTGCCAATGGTTGCCTTCACTTGGACTTTTGACATCTCTCAAGCACTTGACAATTGATGGCCTTGATGAGATAGTGAGGATAGATGCTGATTTTTACGGGAATAGCTCTTCTGCTTTTGCATCCTTGGAAAAGTTGATCATTACTGATATGGAGGAATTGGAAGAATGGCAATGCATGACAGGTGCTTTTCCAAGTCTTCAATTTCTTTCTTTGCATGATTGTCCCAAACTGAAAGGGCACTTGCCAGATCTTCCTCATTTAAAGGATATATATATCAGGCGTTGCAGACAACTTGTAGCTTCGACTCCCAGCGGGGTAGAAATTGAAGGTGTGGAGATGGAGACATCTTCATTTGATATGATAGGGAACCATCTTCAATACTTGAAAATTTTTGATTGTCCGGGCATGAATATTCCCATAAACCACTGCTACCATTTCCTTTTAATTTTGAAAATTAGAGAATGTTGTGACTCTCTCACGAACTTCCCTCTAGACCTATTCCCAAAACTCCACGAGCTTAATTTAACCAACTGTCGTAACCTACAGATAATATCACAGGAGCACCCTCATCATCATTTGAAGAGTCTGTCAATTTATCACTGCTCTGAATTTGAATCATTTCCAAATGAAGGATTACATGCACCTCAAATACAAAAAATTTATATTACAGAAATTGAGAAATTGAAATCAATGCCTAAACGCATGTCTGACCTCCTTCCATCTCTTGATTATCTGTCCATACGTGATTGTCCAGAACTGGAGTTGTCTGAGGGATGTTTGCCATCAAATATAAAAGAAATGCGTCTCTTGAATTGCTCCAAACTTGTTGCCTCTCTAAAGAAGGGTGGTTGGGGAACCAACCCTTCCATACAACTTTTGTCTATTAATGAAGTGGATGGGGAGTGTTTTCCAGATGAAGGTTTTCTCCCACTCTCTATTACTCAGCTAGAAGTAAAAGATTGTCCAAAACTTAAGAAACTGGACTACAGGGGTCTCTGTCACCTCTCCTCTCTTCAGAAATTGGTTATTGAAAATTGTCCAATACTCCAATGTTTGCCAGAGGAGGGTTTACCCGAATCCATTTCAGAACTCAGAATTGAAAGTTGCCCGTTGCTCAAACAGCGGTGCAAGAAAGAAGGCGGCGAAGACTGGATAAAGATTGCTCACGGTGCAAGAAAGAAGAAGGCGAAGACTGGATAA 3555 0.3983 MPMIETLSGALFGAVLQVLFDRLGSRQVFDYFRGKKLDVKLLKKLKRKLVSVKAVVDDAELKQFRDPYVKAWLDEVRDVLLDTEDLMEEIEYEFSRSELEVQSQSSSSKVCNFESKIVEVLDDLESLLSQKDYLGLKNAGGVGIGLGLSSNVSQKLPSTSLVDENVIYGRDDEKEMILKWMTSDTEEHSQLSILSIVGMGGMGKTTLAQHVYNDPMIEGKFAIKGWVCVSDEFDVFMVTKAIVGAITKSKDDSVDLEMVQGRLKEKLTGRKFLLVLDDVRNEHRDQWKSLQTPLKYGAKGSKIIITTRSNKVASIMESNKIRQLKQLQEDHNWQVFAKHAFQNDNSKPNSELKKIGTQIVEKCQGRPLALEMVGSLLQSKSSVSEWESVLRSNIWNLRIEDGKILPALLLSYYHLPSHLKTCFAYCALFPKDHEFEKESLILSWMAQNFLQCSQQSEPLEEIGEQYFNDLLSRSFFYQSNSLDGRYFVMHDLLNDLAKYVSGDICYRLGVDRPGSVPKTTRHFSIVNMDPIECDEYRSLCDAKRLRTFLSTSTNCEMSIQELISNFKFLRLLSLSYCSNIKEVPDTITDLIHLRSLDLSGTSIERLPDSMCSPCNLQVLKLNDCDLLKELPSTLHELTKLRRIELDGTTLRKVPMLLGKLKNLQVWMGKFEVGKSSSEFSIQQLGQLDLHGELSIRNLENIVDPCDALAADLKNKTHVVKLRLIWNFERNNEDPIKEREVLENLQPSKHLKHLSIFHYWGPQFPSWLSDTFVLNVVSLSLYKCKYCQWLPSLGLLTSLKHLTIDGLDEIVRIDADFYGNSSSAFASLEKLIITDMEELEEWQCMTGAFPSLQFLSLHDCPKLKGHLPDLPHLKDIYIRRCRQLVASTPSGVEIEGVEMETSSFDMIGNHLQYLKIFDCPGMNIPINHCYHFLLILKIRECCDSLTNFPLDLFPKLHELNLTNCRNLQIISQEHPHHHLKSLSIYHCSEFESFPNEGLHAPQIQKIYITEIEKLKSMPKRMSDLLPSLDYLSIRDCPELELSEGCLPSNIKEMRLLNCSKLVASLKKGGWGTNPSIQLLSINEVDGECFPDEGFLPLSITQLEVKDCPKLKKLDYRGLCHLSSLQKLVIENCPILQCLPEEGLPESISELRIESCPLLKQRCKKEGGEDWIKIAHGARKKKAKTG* 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1996 1184 Coils Coil 73 93 - -
Pvu11g1996 1184 PRINTS Disease resistance protein signature 193 208 - -
Pvu11g1996 1184 PRINTS Disease resistance protein signature 266 280 - -
Pvu11g1996 1184 PRINTS Disease resistance protein signature 363 377 - -
Pvu11g1996 1184 PRINTS Disease resistance protein signature 564 580 - -
Pvu11g1996 1184 PANTHER DISEASE RESISTANCE PROTEIN RP 35 923 IPR044974 GO:0006952
Pvu11g1996 1184 Gene3D Ribonuclease Inhibitor 893 1179 IPR032675 -
Pvu11g1996 1184 Gene3D - 18 128 - -
Pvu11g1996 1184 Gene3D - 149 323 IPR027417 -
Pvu11g1996 1184 Pfam NB-ARC domain 172 391 IPR002182 GO:0043531
Pvu11g1996 1184 SUPERFAMILY L domain-like 908 1173 - -
Pvu11g1996 1184 SUPERFAMILY L domain-like 488 882 - -
Pvu11g1996 1184 PANTHER OS05G0414200 PROTEIN 35 923 - -
Pvu11g1996 1184 Pfam Rx N-terminal domain 13 104 IPR041118 -
Pvu11g1996 1184 Gene3D Ribonuclease Inhibitor 526 667 IPR032675 -
Pvu11g1996 1184 Gene3D - 326 410 IPR042197 -
Pvu11g1996 1184 Gene3D - 411 499 IPR036388 -
Pvu11g1996 1184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 426 IPR027417 -
Pvu11g1996 1184 Gene3D Ribonuclease Inhibitor 671 892 IPR032675 -
Pvu11g1996 1184 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1996 Pvu-Chr11 46856940 46861684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1996 194 387 WRKY Transcription Factor Family AT5G45050 28.019 6.00e-10 62.0