Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1994 ATGGTTCAGGGACGATTGAAAGAAAAGTTAACGGGAAGGAAGTTTCTCCTCGTCCTTGATGATGTTTGGAACGAACACCGAGACCAATGGAAATCATTGCAAACTCCTCTTAAATATGGGGCTAAGGGAAGTAAAATTATTATCACAACACGTAGTAACAAAGTTGCTTCTATCATGGAGTCAAACAAGATTCGGCAACTAAAGCAATTACAAGAAGATCACAGCTGGCAAGTTTTTGCTAAACATGCATTCCAAAATGATAACTCTAAGCCTAATTCCGAGTTGAAGAAGATTGGCACGCAGATAGTTGAAAAGTGCCAAGGACTGCCTCTGGCCCTTGAAACGGTAGGATCTCTTTTACAGTCAAAGTCATCTGTTTCAGAGTGGGAAAGTGTACTGAGAAGCAACATATGGGACTTACGAAATGAAGATAGTAAAATTCTCCCCGCTTTGTTGTTGAGCTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTCGCTTATTGTGCGTTATTCCCCAAAGAACATGAGTTTGAGAAGCAGAGCTTAATTCTCTCATGGATGGCTCAAAATTTCCTACAATGTTCTCAGCAGAGTGAGTCTCCAGAAGAAATAGGTGAACAGTACTTCAATGATCTATTATCAAGGTCATTCTTTCAGCAGTCAAATTCGTTGGACGGAAGATATTTTGTGATGCACGACCTTCTGAATGATTTAGCAAAATATGTTTCTGGTGAAACCTGCTATAGGTTGGGTGTTGATAGACCAAGAAGCGTACCAAAGACAACTCGTCACTTTTCAATTTTAAATAAGGTTCCCGTTGAATGTGATGAGTATAGGAGTTTATGTGATGCTAAAAGGCTACGAACATTTTTGTGCAGATCTAAGAATTTTGGGATGTCAATAAAAGAGTTGATATCCAACTTTAAGTTCTTACGACACTTATCTTTGTCTTACTGTAGTAACATAAAAGAGGTGCCTGACACCATAACTGATCTCATACATCTCCGTTCATTAGACCTTTCTAATAACTTTATAGAGAGACTTCCAGACTCAATGTGTTCACTTTGTAACTTGCAAGTGTTGAAGCTGAACTACTGTAGGTTATTGAAGGAGTTGCCCTCGACTTTGCATGAGCTCTCTAAGTTGCGCCTCCTTGAACTTAAGGGAACTACTTTAAGAAAGGCTCCAATGCTTTTAGGAAAGTTGAAGAATCTTCAAGTATGGATGGGTGGGTTTGAGGTTGGAAAAAGTAGTAGTGAGTTCAGTATTCAAGAACTAGGACAACTTGATCTTCACGGAGAACTGTCAATTAAAAATCTTGAAAATATCGTGAATCCCTGTGATGTATTGGCAGCGGATTTGAAGAATAAAACACATCTTGTGGATCTATGTTTAGAATGGGATTGCAAGCGGAACAATGAGGATTCAATAAAACAAAGAGAAGTACTTGAGACTCTGCAACCTTCCAAACATTTGAAGCATTTGTCAATCAACGGCTATTCTGGCACACAATTTCCACGTTGGTTATCTGATACATTTGTGTTGAATGTGATGTCCCTAAGTTTGTATAAATGTAAATATTGCCAATGGTTGCCTTCACTTGGACTTTTGACATCTCTCAAGGGCTTGGTAATTCGTGGCCTTGATGAGATAGTGAGGATAGATGCTGATTTTTACGGGAATACCTCTTCTGCTTTTGCATCCTTGGAAAGGTTGACCTTTATTGATATGGAGGAATGGGAAGAATGGCAATGCATGACAGGTGCTTTTCCAAGTCTTCAATATCTTTCTTTGCATGATTGTCCCAAACTGAAAGGGCACTTGCCAGATCTTCCTCATTTAAAGGATATATTTATCATGTCTTGCAGACAACTTGTAGCTTTGACTCCCAGCGGGGTTGAAATTGAAGGTGTGGAGATGGAGACATCTTCATTTGATATGATAGGGAACCATCTTCAATCCTTGAAAATTTTTGATTGTCCGGGCATGAATATTCCCATAAACCACTTCCTTTTAATTTTGGAAATTCGTGAATGTTGTGACTCTCTCACGAACTTCCCTCTAGACCTATTTCCAAAACTCCACGAGCTTTATTTAGGCAAATGTCATAACCTACAGATAATATCACAAGAGCACCCTCATCATCATTTGAAGAGTCTGTCAATTTATCACTGCTCTGAATTTGAATCATTTCCAAATGAAGGATTACTTGCACCTCAAATACAAATAATTTTTATTACAAAAACGGAGAAATTGAAATCAATGCCTAAACGCATGTCTGACCTCCTTCCATCTCTTGATTATCTGTCCATACGTGATTGTCCAGGAGTGGAGTTGTCTGAGGGATGTTTGCCATCAAATATAAAAAAAATGTGTCTCTTGAATTGCTCCAAACTTGTTGCCTCTCTAAAGAAGGGTGGTTGGGGAACCAACCCTTCCATACAACTTTTGTCTATTAATGAAGTGGATGGGGAGTGCTTTCCAGATGAAGGTTTTCTCCCACTCTCTATTACTCAGCTAGACGTAAAAGATTGTCCAAAACTTAAGAAACTGGACTACAGGGGTCTCTGTCACCTCTCCTCTCTTCAGAAATTGGTTATTGAAAATTGTCCAATACTCCAATGTTTGCCAGAGGAGGGTTTACCCGAATCCATTTCAGAACTCAGAATTGAAAGTTGCCCGTTGCTCAATCAGCGGTGCAAGAAAGAAGAAGGCGAAGACTGGATAAAGATTGCTCACATTAAAGCTATATGGGTTGATTGGATACCAGTAAACATATAA 2784 0.3908 MVQGRLKEKLTGRKFLLVLDDVWNEHRDQWKSLQTPLKYGAKGSKIIITTRSNKVASIMESNKIRQLKQLQEDHSWQVFAKHAFQNDNSKPNSELKKIGTQIVEKCQGLPLALETVGSLLQSKSSVSEWESVLRSNIWDLRNEDSKILPALLLSYYHLPSHLKRCFAYCALFPKEHEFEKQSLILSWMAQNFLQCSQQSESPEEIGEQYFNDLLSRSFFQQSNSLDGRYFVMHDLLNDLAKYVSGETCYRLGVDRPRSVPKTTRHFSILNKVPVECDEYRSLCDAKRLRTFLCRSKNFGMSIKELISNFKFLRHLSLSYCSNIKEVPDTITDLIHLRSLDLSNNFIERLPDSMCSLCNLQVLKLNYCRLLKELPSTLHELSKLRLLELKGTTLRKAPMLLGKLKNLQVWMGGFEVGKSSSEFSIQELGQLDLHGELSIKNLENIVNPCDVLAADLKNKTHLVDLCLEWDCKRNNEDSIKQREVLETLQPSKHLKHLSINGYSGTQFPRWLSDTFVLNVMSLSLYKCKYCQWLPSLGLLTSLKGLVIRGLDEIVRIDADFYGNTSSAFASLERLTFIDMEEWEEWQCMTGAFPSLQYLSLHDCPKLKGHLPDLPHLKDIFIMSCRQLVALTPSGVEIEGVEMETSSFDMIGNHLQSLKIFDCPGMNIPINHFLLILEIRECCDSLTNFPLDLFPKLHELYLGKCHNLQIISQEHPHHHLKSLSIYHCSEFESFPNEGLLAPQIQIIFITKTEKLKSMPKRMSDLLPSLDYLSIRDCPGVELSEGCLPSNIKKMCLLNCSKLVASLKKGGWGTNPSIQLLSINEVDGECFPDEGFLPLSITQLDVKDCPKLKKLDYRGLCHLSSLQKLVIENCPILQCLPEEGLPESISELRIESCPLLNQRCKKEEGEDWIKIAHIKAIWVDWIPVNI* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1994 927 Gene3D - 1 67 IPR027417 -
Pvu11g1994 927 Gene3D Ribonuclease Inhibitor 682 916 IPR032675 -
Pvu11g1994 927 Gene3D - 154 242 IPR036388 -
Pvu11g1994 927 PRINTS Disease resistance protein signature 9 23 - -
Pvu11g1994 927 PRINTS Disease resistance protein signature 106 120 - -
Pvu11g1994 927 PRINTS Disease resistance protein signature 307 323 - -
Pvu11g1994 927 PANTHER OS05G0414200 PROTEIN 1 731 - -
Pvu11g1994 927 Gene3D Ribonuclease Inhibitor 418 616 IPR032675 -
Pvu11g1994 927 SMART LRR_typ_2 333 356 IPR003591 -
Pvu11g1994 927 ProSiteProfiles Leucine-rich repeat profile. 335 356 IPR001611 GO:0005515
Pvu11g1994 927 SUPERFAMILY L domain-like 231 662 - -
Pvu11g1994 927 SUPERFAMILY L domain-like 624 913 - -
Pvu11g1994 927 Gene3D Ribonuclease Inhibitor 258 410 IPR032675 -
Pvu11g1994 927 PANTHER DISEASE RESISTANCE PROTEIN RP 1 731 IPR044974 GO:0006952
Pvu11g1994 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 169 IPR027417 -
Pvu11g1994 927 Pfam NB-ARC domain 3 134 IPR002182 GO:0043531
Pvu11g1994 927 Gene3D - 69 153 IPR042197 -
Pvu11g1994 927 Pfam Leucine rich repeat 312 369 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1994 Pvu-Chr11 46813458 46817406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1994 267 446 Receptor kinase-like Gene Family AT4G13820 32.632 5.53e-11 64.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1994 11 46813458 46817406 Pvu11g1994 11 46813458 46817406 ECH