Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1992 ATGCCAGTGATAGAAACACTTGGTGGTGCCCTTTTCGGTGCTGTTCTTCAGGTGCTGTTTGACAAGCTTGATTCTCGTCAAGTTCTGGACTACTTTCGTGGAAGAAAGCTCGATGAGAAGCTGCTGAAGAAGTTGAAGAGGAAGCTGGTGTCCGTTAATGCTGTGGTTGATGATGCAGAACAGAAGCAGTTCAGAAATGCGTATGTGAAGGCATGGCTTGATGAGGTCAGAGATGTGTTGCTTGATACAGAGGATCTGATGGAGGAAATAGAGTATGAATTCTCCAGATATGAGTTGGAAGTTCAATTCCACAGCAGTTCTAGCAAGGTATGCAGTTTTGAATCCAGGATTGTAGAAGTCCTTGATGACCTAGAATCTCTTCTAAGCCAAAAGGATGATCTAGGTTTGAAAAATGCTAGCGGAGTAGGGGTTGGGTTAGGGTTGAGTAGTAATGTCTTACATAAATTGCCATCTGAAATGATCCTTAAATGGATGACTTCTGATGACACTGAAGAGCATAGCCAACTATCAATACTTTCTGTTGTGGGTATGGGTGGGATGGGTAAGACCACACTTGCTCAACATGTGTACAATGACCCAATGATAGAGGATAAATTTGCTATCAAAGGTTGGCTTTGTGTTTCGGATGAATTTGATGTTTTTATGGTAACAAAAGCAATTGTTGGGGCAATCACTAAATCAAAAGATGATAGTGTAGACCTAGAAATGGTTCAAGGACGATTGAAAGAAACGTTGGCAGGAAGGAAGTTTCTCCTCGTTCTGGATGATGGAAGTAAAATTCTCATCACAACACGCAGTAACAAAGTTGCTTCTATCATGGAGTCAAACAATATTCACCAACTAAAGCAATTACATAAAGATAACAGCTGGCAAGTTTTTGCTAAACATGCATTCCAAAATGATAACTCTAAGTCGAGTTTTGTGTTGAAGGAGATTGGCATGAAGATAGCTGAAAAGTGCCAAGGACTGCCTCTAGCCCTTGAAACAGTAGGATCTCTTTTACAGTCAAAGTCATCTGTTTCAGAGTGGGAAAGTGTACTGAGAAGCAACATATGGGACTTACGAATTGAAGATAGTAAAATCATCCCCGCTTTGTTGTTGAGCTATTACCATCTTCCTTCTAATCTCAAGAGATGTTTCGCTTATTGTGCTTTATTCCCCAAAGACCATAAGTTTGAGAAGGAGAGCTTAATTCTCTCATGGATGGCTCAGAATTTCCTACAATGTTCTCACGAGAGGGAGTCTCCAGAAGAAATAGGTGAACAATACTTCAATGATCTATTATCAAGGTCATTCTTTCAGCAATCAATTTGGTACAACGAAACATGTTTTCTGATGCACGACCTTCTGAATGATTTAGCAAAATATGTTTCTAGTGAAATGTGCTACAGTTTAGGTGTTGATAGACCAAGAAGCGTACCAAAGACAACTCGTCACTTTTCAATTTTAAATAAGGATCCCGTTGAATGTGATGAGTACAGGAGTTTATGTGATGCTAAAAGGCTACGGACATTTTTGTCCATGTCTACGAATTTTGGGATGTCAATACAAGAGTTGATCTCCAACTTTAAGTTCTTACGACTCTTATCTTTGTCGAGCTGCCTTAATATAAAAGAGGTGCTTGACACTATAGCCGATCTCATACATCTCCGTTCATTAGACCTTTCTGGTATCCTTATAGAGAGACTTCCCAACTCAGCGTGTTCACTTTGTAACTTGCAAGTGTTGAAGCTGAACAAATGTGAGTTTTTGAAGGAGCTGCCCTCGACTTTGATTGAGCTCACTAAGTTGCGCCGCATTGAACTTATGGGAACTACATTAATAAAGGCTCCAGTGCTTTTAGGAAACTTGAAGAGTCTTCAAGTATGGTTGACGAATTTGAAGAATAAAACACATCTTGTGGGGCTAGATTTACAATGGGATTGGATGCGGAACAATGAGGATTCAATAAAAGAAAGAGAAGTACTAGCGAATCTGCAACCTTCTAGATATTTGGAGCAGTTGTCAATCTATCACTATGGTGGCACACAATTTCCACGTTGGTTATCTGATAAATTTCTATTGCATGTGGTGTCCCTAAACTTGTATAACTGTAAATATTGCCAATGGTTGCCTTCCCTTGGACTTTTGGCATCTCTCAAGCAATTGACAATTGAGGGCCTTGATGAGATAGTGAGGATAGATGCTGATTTTTACGGGAATAACTCTTCTGCATTTGCATCCTTGGAAACGTTGACCTTTCATGATATGAATGGATGGGAAGAATGGCAATGCATGACGGGTGCTTTTCCAAGGCACTTGCCAGAGCATCTTCCTCATTTAAAAGAGCTAACTGTTTTTGACTGCAAACAACTTGTGGCTTCGACTCCCAAGGCGGTAGAAATTGAAGGTGTGAAGAAAGAGACATCTTCATTTGATATGTTGTTGCACCATATTGAATCCTTGAGTATTCATATTTGTCCGGGCATGAATATTCTCATAAACCATTGTTACCATTTCCTTGTAGAATTGGATATCAATGAATGTTGTGACTCTCTGACGAACTTCCCTCTAGACTTATTCCCAAATCTGTGCGGGCTTAAATTAGGCAATTGTGGTAACCTACGGATGATATCACAGGGGCACCCTCATCGTCATTTGAAGAATCTGTCGATTCAACATTGCTCTGAATTTGAATCATTTCCCAATGAAGGGTTATTTGCACTTCAGCTAGAGAGCTTTTATATTAAAGGATTGGAGAAATTGAAATCAATGCCTAAACACATATCTGCCCTCCTTCCATCTCTTCATTTTCTGAATATAATGGATTGTCCAGGAGTGGAGTTGTCCGAGGGATGTTTGCCATCAAATCTAAAACACATCTCTCTCTGGAATTGCTCCAAACTTGTTGCCTCACTAAAGAAGGGGGTTTGGAGAACCAACCCTTCCATAGAATCCTTGTCTTTTAAAGAAGAGGATGTGGAGTGTTTTCCGGATGAAGGTTTGCTCCCACTCTCTCCTACTAATCTAGAGATACGTGATTGTCCAAAACTTAAAAAACTGGATTACAAGGGTCTGTCACCTTTCCTCTCTTCAGAAATTGGTTATTCAGAATTGTCCAATACTGGAATGCTTGCCAGAGGA 3144 0.4008 MPVIETLGGALFGAVLQVLFDKLDSRQVLDYFRGRKLDEKLLKKLKRKLVSVNAVVDDAEQKQFRNAYVKAWLDEVRDVLLDTEDLMEEIEYEFSRYELEVQFHSSSSKVCSFESRIVEVLDDLESLLSQKDDLGLKNASGVGVGLGLSSNVLHKLPSEMILKWMTSDDTEEHSQLSILSVVGMGGMGKTTLAQHVYNDPMIEDKFAIKGWLCVSDEFDVFMVTKAIVGAITKSKDDSVDLEMVQGRLKETLAGRKFLLVLDDGSKILITTRSNKVASIMESNNIHQLKQLHKDNSWQVFAKHAFQNDNSKSSFVLKEIGMKIAEKCQGLPLALETVGSLLQSKSSVSEWESVLRSNIWDLRIEDSKIIPALLLSYYHLPSNLKRCFAYCALFPKDHKFEKESLILSWMAQNFLQCSHERESPEEIGEQYFNDLLSRSFFQQSIWYNETCFLMHDLLNDLAKYVSSEMCYSLGVDRPRSVPKTTRHFSILNKDPVECDEYRSLCDAKRLRTFLSMSTNFGMSIQELISNFKFLRLLSLSSCLNIKEVLDTIADLIHLRSLDLSGILIERLPNSACSLCNLQVLKLNKCEFLKELPSTLIELTKLRRIELMGTTLIKAPVLLGNLKSLQVWLTNLKNKTHLVGLDLQWDWMRNNEDSIKEREVLANLQPSRYLEQLSIYHYGGTQFPRWLSDKFLLHVVSLNLYNCKYCQWLPSLGLLASLKQLTIEGLDEIVRIDADFYGNNSSAFASLETLTFHDMNGWEEWQCMTGAFPRHLPEHLPHLKELTVFDCKQLVASTPKAVEIEGVKKETSSFDMLLHHIESLSIHICPGMNILINHCYHFLVELDINECCDSLTNFPLDLFPNLCGLKLGNCGNLRMISQGHPHRHLKNLSIQHCSEFESFPNEGLFALQLESFYIKGLEKLKSMPKHISALLPSLHFLNIMDCPGVELSEGCLPSNLKHISLWNCSKLVASLKKGVWRTNPSIESLSFKEEDVECFPDEGLLPLSPTNLEIRDCPKLKKLDYKGLSPFLSSEIGYSELSNTGMLARG 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1992 1048 Coils Coil 73 93 - -
Pvu11g1992 1048 PANTHER DISEASE RESISTANCE PROTEIN RP 24 901 IPR044974 GO:0006952
Pvu11g1992 1048 Pfam NB-ARC domain 171 263 IPR002182 GO:0043531
Pvu11g1992 1048 Pfam NB-ARC domain 264 355 IPR002182 GO:0043531
Pvu11g1992 1048 Pfam Rx N-terminal domain 13 103 IPR041118 -
Pvu11g1992 1048 Gene3D - 375 463 IPR036388 -
Pvu11g1992 1048 Gene3D - 149 287 IPR027417 -
Pvu11g1992 1048 SUPERFAMILY L domain-like 453 791 - -
Pvu11g1992 1048 Gene3D - 290 374 IPR042197 -
Pvu11g1992 1048 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 390 IPR027417 -
Pvu11g1992 1048 PRINTS Disease resistance protein signature 178 193 - -
Pvu11g1992 1048 PRINTS Disease resistance protein signature 251 265 - -
Pvu11g1992 1048 PRINTS Disease resistance protein signature 327 341 - -
Pvu11g1992 1048 PRINTS Disease resistance protein signature 575 591 - -
Pvu11g1992 1048 SUPERFAMILY RNI-like 769 1025 - -
Pvu11g1992 1048 PANTHER OS05G0414200 PROTEIN 24 901 - -
Pvu11g1992 1048 Gene3D Ribonuclease Inhibitor 809 1032 IPR032675 -
Pvu11g1992 1048 Gene3D - 16 128 - -
Pvu11g1992 1048 Gene3D Ribonuclease Inhibitor 482 625 IPR032675 -
Pvu11g1992 1048 Gene3D Ribonuclease Inhibitor 626 808 IPR032675 -
Pvu11g1992 1048 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1992 Pvu-Chr11 46805742 46809156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1992 554 788 Receptor kinase-like Gene Family AT4G13920 25.490 4.57e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1992 11 46805742 46809156 Pvu11g1992 11 46805742 46809156 ECH