Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1978 ACAGGTGGCGATGGTGTGGTGTCAGTGTTCCCCGATCCAGTGCTTGAGTTGCACACAACACGATCTTGGGATTTCTTGGAATCAGATTTGGGAATGAAGCTTTCCAAAACCCTAATCCAACACTCTTCATCTGACACCATTATTGCTGTCATAGACACAGGGATATGGCCAGAGTCTCCAAGTTTCAGAGATGAGGGTATAGGGGAGATCCCTGCAAGATGGAAAGGAGTTTGCATGGAGAGTCATGATTTCAAGAAATCCAATTGCAATAGAAAATTGATTGGTGCAAGATACTACAATATTCAAGCTGCACCAGGTAGCAACCAGACTCATATAGAAGCAACAAAAGATTCCCCAAGAGATTCTGTTGGACATGGGACTCACACTGCATCAATAGCAGCAGGTGTTTATGTCAACAATGCCAGTTATTATGGTTTAGCACCAGGCACAGCAAGAGGTGGTTCACCTTCTGCTAGGATTGCTGCTTATAGAACATGCTCAGAAGAAGGATGCTCTGGTGCCACCATTTTAAAGGCTATTGATGATGCTGTAAACGATGGAGTAGATGTAATCTCAATCTCCATTGGACTCAGCTCACTATTTCAAGCAGACTTTTTGAGTGATCCTATAGCCATTGGAGCATTTCATGCAGAACAAATGGGGGTCATGGTGGTGTGCTCAGCTGGCAATGATGGCCCTGATCCTTTCACAGTTGTGAATTCTGCTCCATGGATATTTACCATTGCAGCTTCTAATATTGACAGGAACTTCCAATCAACTATTGTCCTTGGAAATGGAAAATACTTCCAAGGTTCAGGCATTAACTTCTCAAATCTTACTCATTCAAAGATGCATAGCCTTGTCTTTGCAGAGCAAGTAGCTGCCAAATTTGCCCCTGCATCGGAAGCTAGGAACTGTTATCCTGGATCACTAGATTACAGCAAAATTGCTGGCAACATTGTTGTTTGTGCTAATGATGATCCAACTGTCTCAAGGAGAATCAAGAAGCTAGTGGTACAAGATGGAAGAGCCTTAGGGTTGATACTCATTGATGAGGACAACAAAGATGTTCCCTTTGATGCAGGTGTGTTTCCCTTCACTGAGGTTGGCAATCTTGAAGGGCATCAGATCCTACAATACATAAACTCTACCAAGAACCCAACTGCAACAATTCTTCCAACAGCAGAAGTTGCTAGATATAAGCCTTCACCAATTGTTGCATCTTTCTCATCCAGAGGTCCTTCAAGCCTTACAGAAAACATTCTCAAGCCTGATATCATGGCTCCAGGAATTGGCATTTTGGCTGCTATGATTCCTAAAAGCACTGAGCCAGGAAGTGTTCCAATTGGGAAAAAACCATCCTTGTTTGGCATAAAATCTGGTACATCTATGGCTTGCCCTCATGTGACAGGTGCAGCAGCATTCATTAAATCAGTACACCAAAATTGGACTCCTTCAATGGTCAAATCAGCATTGATGACAACAGCTACAAATTACAACAACTTGAGGAAGCCTCTTACTAACAGCTCAAACTACATTGCTGACCCACATGAAATTGGAGTTGGGGAAATTAATCCACTCAGAGCTCTTCACCCTGGCCTAGTTTTTGAAACAACCATGGAAGACTATCTCAGATTCCTTTGTTATTTTGGCTATTCACAGAACAAGGTAAGGTCAATGTCTAAGACCAACTTTAATTGCCCCAAGAACTCCTCTGAAGACCTTGTCTCCAACATCAATTATCCATCAGTATCTATAAGCACACTTAAAAGGCAACAAAAACCAAAAGTGATTACAAGAACAGTTACCAATGTTGGATCCCTTAATGCCACATACACTGCAAAAGTGAGATCACCTGAGGGGTTGGTTGTGAAGGTCATCCCCAATAAACTTGTGTTTTCTGAGGGTGTTCAAAGAATTACCTACAAAATCTCCTTCTATGGCAAGGAGGCCAATGGTGGATACAATTTTGGATCTCTAACATGGCTTGATGGTCACCATTATGTTCATACAGTGTTTGCAGTCAAAGTTGAATAG 2037 0.4217 TGGDGVVSVFPDPVLELHTTRSWDFLESDLGMKLSKTLIQHSSSDTIIAVIDTGIWPESPSFRDEGIGEIPARWKGVCMESHDFKKSNCNRKLIGARYYNIQAAPGSNQTHIEATKDSPRDSVGHGTHTASIAAGVYVNNASYYGLAPGTARGGSPSARIAAYRTCSEEGCSGATILKAIDDAVNDGVDVISISIGLSSLFQADFLSDPIAIGAFHAEQMGVMVVCSAGNDGPDPFTVVNSAPWIFTIAASNIDRNFQSTIVLGNGKYFQGSGINFSNLTHSKMHSLVFAEQVAAKFAPASEARNCYPGSLDYSKIAGNIVVCANDDPTVSRRIKKLVVQDGRALGLILIDEDNKDVPFDAGVFPFTEVGNLEGHQILQYINSTKNPTATILPTAEVARYKPSPIVASFSSRGPSSLTENILKPDIMAPGIGILAAMIPKSTEPGSVPIGKKPSLFGIKSGTSMACPHVTGAAAFIKSVHQNWTPSMVKSALMTTATNYNNLRKPLTNSSNYIADPHEIGVGEINPLRALHPGLVFETTMEDYLRFLCYFGYSQNKVRSMSKTNFNCPKNSSEDLVSNINYPSVSISTLKRQQKPKVITRTVTNVGSLNATYTAKVRSPEGLVVKVIPNKLVFSEGVQRITYKISFYGKEANGGYNFGSLTWLDGHHYVHTVFAVKVE* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1978 678 Gene3D - 254 398 - -
Pvu11g1978 678 SUPERFAMILY Subtilisin-like 17 534 IPR036852 GO:0004252|GO:0006508
Pvu11g1978 678 Gene3D Peptidase S8/S53 domain 45 543 IPR036852 GO:0004252|GO:0006508
Pvu11g1978 678 Pfam Fibronectin type-III domain 578 675 IPR041469 -
Pvu11g1978 678 Gene3D - 547 677 - -
Pvu11g1978 678 Pfam Subtilase family 44 501 IPR000209 GO:0006508|GO:0008236
Pvu11g1978 678 ProSitePatterns Serine proteases, subtilase family, serine active site. 461 471 IPR023828 -
Pvu11g1978 678 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 674 IPR045051 -
Pvu11g1978 678 PANTHER CO(2)-RESPONSE SECRETED PROTEASE 4 674 - -
Pvu11g1978 678 PRINTS Subtilisin serine protease family (S8) signature 43 62 IPR015500 -
Pvu11g1978 678 PRINTS Subtilisin serine protease family (S8) signature 121 134 IPR015500 -
Pvu11g1978 678 PRINTS Subtilisin serine protease family (S8) signature 460 476 IPR015500 -
Pvu11g1978 678 CDD PA_subtilisin_like 260 391 - -
Pvu11g1978 678 CDD Peptidases_S8_3 15 497 IPR034197 -
Pvu11g1978 678 ProSiteProfiles Serine proteases, subtilase domain profile. 22 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1978 Pvu-Chr11 46701010 46709778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1978 5 675 Subtilisin-like Serine Gene Family AT1G20150 43.497 0.0 560