Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1972 ATGAAAGAGGAGAATGTTAATCAGCCATTGTTGGAGAAGAAGAAGAAATACTACGAGAACTGCCCTGGTTGTAAAGTGGATAAAGCCAACGAGTTGAATGAGGGACAAGGTGTACCCTTCACAAAGCTTTTAATCGTGTGGATGCTGGTGCTTTGTGCTGCATTGCCAATATCATCTCTCTTTCCATTCCTCTATTTCATGGTAAGGGATTTTAATATTGCGAAAACAGAAGCTGATATTAGTTCTTATGCTGGTTACGTGGGTTCTGCATTTATGCTTGGCAGATGTTTGACATCTTTATTTTGGGGAACTGTAGCTGATCGCATTGGTCGAAAACCTGTTATAACAATTGGAATTATGTCAGTCGTCATTTTCAACACACTATTTGGCCTTAGCACAAGTTTTTGGATGGCTGTTATCGTGAGGTTTCTTCTGGGAAGTTTAAATTGTTTGCTTGGACCAGTGAGGGCCTATGCCTCTGAACTTTTTCGAGAAGAACACCAAACTCTTGGACTCTCAACCGTAAGTGCAGCTTGGGGCATAGGTTTAATAGTTGGCCCAGCATTGGGAGGCTATTTGTCTCAGCCAGTAGAAAAGTACCCTCATATATTTCCAAAGGATAGCTTTTGGGATAAGTTTCCATACTTCCTACCCAACTTTGTAATATCAGCACTTGCATTTGTAGTAGCAATTGGCTGCATCTGGATTCCAGAAACACTTCACAACCACAATTACAGTGATGAATCCATGGAAGATGCCAAAGCTTTAGAAAATGGAAACAATGGGGCTGACAAAGAAAATATCCAAAAAAATGAAAACCTCTTCCTTAATTGGCCCTTAATGTCATCTATCATTGCATATTGCATTTTCTCACTTCATGATATTACTTATCTAGAGGTTTTCTCCTTATGGGCTGTTTCTCCTCAAAGGTTTGGTGGTTTAAACTTTACAACTGATAATGTTGGTAATGTTCTTTCAATATCAGGTCTTGCACTTATCATTTACCAACTTACCATATATCCATCTGTGGAAAAAGCAAGTGGACCTATTTCGCTTGCTCGCATCTCATCTATTTTATCCATACCTCTTTTGCAAAGCTACCCCTTCATAACATTGTTCTCAGGCTTAGCACTATACGTAGTGTTAAGTATTCTTTCAATCCTAAAGAATATTTTTTCTATCACCATTATAACTGGTTTGCTCCTTCTGCAAAATCGAGCAGTGGAACAACACCAAAGAGGTGCAGCTAATGGAATTGTTATGACAGGCATGTCTCTATTCAATGCTATTGGCCCTGTTACAGGTGGTGCAGTATTAACTTGGTCACAAAAGAGGATGGATGCTTCATTCCTCCCAGGCACACATATGGTGTTTTTTGTCTTGAACATAGTTGAAGCACTTGGATTACTCATGATGTTCAAACCATTCCTTGTTGAAAAAAAGAAAATGCACACAGATCATTCTTGA 1467 0.3913 MKEENVNQPLLEKKKKYYENCPGCKVDKANELNEGQGVPFTKLLIVWMLVLCAALPISSLFPFLYFMVRDFNIAKTEADISSYAGYVGSAFMLGRCLTSLFWGTVADRIGRKPVITIGIMSVVIFNTLFGLSTSFWMAVIVRFLLGSLNCLLGPVRAYASELFREEHQTLGLSTVSAAWGIGLIVGPALGGYLSQPVEKYPHIFPKDSFWDKFPYFLPNFVISALAFVVAIGCIWIPETLHNHNYSDESMEDAKALENGNNGADKENIQKNENLFLNWPLMSSIIAYCIFSLHDITYLEVFSLWAVSPQRFGGLNFTTDNVGNVLSISGLALIIYQLTIYPSVEKASGPISLARISSILSIPLLQSYPFITLFSGLALYVVLSILSILKNIFSITIITGLLLLQNRAVEQHQRGAANGIVMTGMSLFNAIGPVTGGAVLTWSQKRMDASFLPGTHMVFFVLNIVEALGLLMMFKPFLVEKKKMHTDHS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1972 488 Gene3D MFS general substrate transporter like domains 41 473 IPR036259 -
Pvu11g1972 488 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 480 IPR020846 GO:0022857
Pvu11g1972 488 Pfam Major Facilitator Superfamily 46 291 IPR011701 GO:0022857|GO:0055085
Pvu11g1972 488 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 487 - -
Pvu11g1972 488 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 487 - -
Pvu11g1972 488 CDD MFS_SLC46_TetA_like 46 474 - -
Pvu11g1972 488 PRINTS Tetracycline resistance protein signature 115 139 IPR001958 GO:0022857
Pvu11g1972 488 PRINTS Tetracycline resistance protein signature 172 194 IPR001958 GO:0022857
Pvu11g1972 488 SUPERFAMILY MFS general substrate transporter 43 481 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1972 Pvu-Chr11 46638453 46646994 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1972 11 46638453 46646994 Pvu11g1972 11 46638453 46646994 ECH